RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 NISCHQ9Y2I1 1504 aa38.78■■■■□ 3.8
CCDC130-212ENST00000593174 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
CCDC130-212ENST00000593174 ZCCHC6Q5VYS8 1495 aaKnown RBP32.5■■■□□ 2.79
CCDC130-212ENST00000593174 ABCC9O60706 1549 aa32.41■■■□□ 2.78
CCDC130-212ENST00000593174 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
CCDC130-212ENST00000593174 DCAF1Q9Y4B6 1507 aa32.06■■■□□ 2.72
CCDC130-212ENST00000593174 MYO15BQ96JP2 1530 aa31.79■■■□□ 2.68
CCDC130-212ENST00000593174 NACADO15069 1562 aa31.71■■■□□ 2.67
CCDC130-212ENST00000593174 RB1CC1Q8TDY2 1594 aa31.52■■■□□ 2.64
CCDC130-212ENST00000593174 SHROOM4Q9ULL8 1493 aa31.43■■■□□ 2.62
CCDC130-212ENST00000593174 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
CCDC130-212ENST00000593174 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
CCDC130-212ENST00000593174 BICRAQ9NZM4 1560 aa30.56■■■□□ 2.48
CCDC130-212ENST00000593174 PABPN1Q86U42 306 aaKnown RBP eCLIP30.51■■■□□ 2.47
CCDC130-212ENST00000593174 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
CCDC130-212ENST00000593174 SUPT5HO00267 1087 aaKnown RBP30.1■■■□□ 2.41
CCDC130-212ENST00000593174 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
CCDC130-212ENST00000593174 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
CCDC130-212ENST00000593174 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.38
CCDC130-212ENST00000593174 SMARCA4P51532 1647 aa29.88■■■□□ 2.37
CCDC130-212ENST00000593174 WIZO95785 1651 aa29.7■■■□□ 2.35
CCDC130-212ENST00000593174 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
CCDC130-212ENST00000593174 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.31
CCDC130-212ENST00000593174 ATAD2BQ9ULI0 1458 aa29.46■■■□□ 2.31
CCDC130-212ENST00000593174 SMARCA2P51531 1590 aa29.45■■■□□ 2.3
CCDC130-212ENST00000593174 TOP2AP11388 1531 aaKnown RBP29.37■■■□□ 2.29
CCDC130-212ENST00000593174 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
CCDC130-212ENST00000593174 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
CCDC130-212ENST00000593174 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
CCDC130-212ENST00000593174 HMGXB3Q12766 1538 aa29.19■■■□□ 2.26
CCDC130-212ENST00000593174 CCDC88BA6NC98 1476 aa29.08■■■□□ 2.25
CCDC130-212ENST00000593174 DNAJC5BQ9UF47 199 aa29.05■■■□□ 2.24
CCDC130-212ENST00000593174 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
CCDC130-212ENST00000593174 CFTRP13569 1480 aa28.52■■■□□ 2.16
CCDC130-212ENST00000593174 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
CCDC130-212ENST00000593174 PRDM2Q13029 1718 aa28.39■■■□□ 2.14
CCDC130-212ENST00000593174 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
CCDC130-212ENST00000593174 NESP48681 1621 aa28.34■■■□□ 2.13
CCDC130-212ENST00000593174 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
CCDC130-212ENST00000593174 LAMC3Q9Y6N6 1575 aa28.32■■■□□ 2.12
CCDC130-212ENST00000593174 WRNQ14191 1432 aaPredicted RBP eCLIP28.21■■■□□ 2.11
CCDC130-212ENST00000593174 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
CCDC130-212ENST00000593174 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
CCDC130-212ENST00000593174 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
CCDC130-212ENST00000593174 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
CCDC130-212ENST00000593174 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
CCDC130-212ENST00000593174 CUX1P39880 1505 aa28.02■■■□□ 2.08
CCDC130-212ENST00000593174 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
CCDC130-212ENST00000593174 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
CCDC130-212ENST00000593174 DNMBPQ6XZF7 1577 aa27.88■■■□□ 2.05
CCDC130-212ENST00000593174 URB2Q14146 1524 aaKnown RBP27.84■■■□□ 2.05
CCDC130-212ENST00000593174 TOPBP1Q92547 1522 aa27.84■■■□□ 2.05
CCDC130-212ENST00000593174 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
CCDC130-212ENST00000593174 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
CCDC130-212ENST00000593174 MRC2Q9UBG0 1479 aa27.77■■■□□ 2.04
CCDC130-212ENST00000593174 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
CCDC130-212ENST00000593174 SOGA1O94964 1423 aa27.76■■■□□ 2.04
CCDC130-212ENST00000593174 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
CCDC130-212ENST00000593174 POLA1P09884 1462 aaPredicted RBP27.67■■■□□ 2.02
CCDC130-212ENST00000593174 EEA1Q15075 1411 aa27.66■■■□□ 2.02
CCDC130-212ENST00000593174 WDR62O43379 1518 aa27.63■■■□□ 2.01
CCDC130-212ENST00000593174 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
CCDC130-212ENST00000593174 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
CCDC130-212ENST00000593174 CSRNP3Q8WYN3 585 aa27.55■■■□□ 2
CCDC130-212ENST00000593174 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
CCDC130-212ENST00000593174 KIF27Q86VH2 1401 aa27.54■■■□□ 2
CCDC130-212ENST00000593174 CUX2O14529 1486 aa27.54■■■□□ 2
CCDC130-212ENST00000593174 ABCA10Q8WWZ4 1543 aa27.51■■□□□ 1.99
CCDC130-212ENST00000593174 WDR97A6NE52 1622 aa27.45■■□□□ 1.99
CCDC130-212ENST00000593174 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.99
CCDC130-212ENST00000593174 EHMT2Q96KQ7 1210 aa27.43■■□□□ 1.98
CCDC130-212ENST00000593174 IFT140Q96RY7 1462 aa27.39■■□□□ 1.97
CCDC130-212ENST00000593174 TDRD9Q8NDG6 1382 aaKnown RBP27.36■■□□□ 1.97
CCDC130-212ENST00000593174 IGF1RP08069 1367 aa27.33■■□□□ 1.97
CCDC130-212ENST00000593174 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
CCDC130-212ENST00000593174 KIF21BO75037 1637 aa27.31■■□□□ 1.96
CCDC130-212ENST00000593174 GAPVD1Q14C86 1478 aa27.29■■□□□ 1.96
CCDC130-212ENST00000593174 GOLGA3Q08378 1498 aa27.26■■□□□ 1.96
CCDC130-212ENST00000593174 PRXQ9BXM0 1461 aa27.26■■□□□ 1.95
CCDC130-212ENST00000593174 ZNF608Q9ULD9 1512 aaPredicted RBP27.24■■□□□ 1.95
CCDC130-212ENST00000593174 AQRO60306 1485 aaKnown RBP eCLIP27.23■■□□□ 1.953e-6■■■■□ 20.5
CCDC130-212ENST00000593174 RAPGEF2Q9Y4G8 1499 aa27.21■■□□□ 1.95
CCDC130-212ENST00000593174 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
CCDC130-212ENST00000593174 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
CCDC130-212ENST00000593174 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
CCDC130-212ENST00000593174 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
CCDC130-212ENST00000593174 CUL7Q14999 1698 aa27.15■■□□□ 1.94
CCDC130-212ENST00000593174 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.94
CCDC130-212ENST00000593174 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
CCDC130-212ENST00000593174 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
CCDC130-212ENST00000593174 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
CCDC130-212ENST00000593174 ADAMTS12P58397 1594 aa26.98■■□□□ 1.91
CCDC130-212ENST00000593174 SNAPC4Q5SXM2 1469 aa26.97■■□□□ 1.91
CCDC130-212ENST00000593174 CEP162Q5TB80 1403 aa26.94■■□□□ 1.9
CCDC130-212ENST00000593174 MAGI1Q96QZ7 1491 aaPredicted RBP26.92■■□□□ 1.9
CCDC130-212ENST00000593174 RANGAP1P46060 587 aaPredicted RBP26.84■■□□□ 1.89
CCDC130-212ENST00000593174 SYNJ2O15056 1496 aa26.82■■□□□ 1.88
CCDC130-212ENST00000593174 CLIP1P30622 1438 aa26.82■■□□□ 1.88
CCDC130-212ENST00000593174 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
CCDC130-212ENST00000593174 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms