RNA–Protein interactions for RNA: ENST00000469068.1

FGFR3-206, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 3

Gene FGFR3, Length 821 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-206ENST00000469068 NISCHQ9Y2I1 1504 aa38.98■■■■□ 3.83
FGFR3-206ENST00000469068 CCDC180Q9P1Z9 1646 aa35.03■■■■□ 3.2
FGFR3-206ENST00000469068 ABCC9O60706 1549 aa34.91■■■■□ 3.18
FGFR3-206ENST00000469068 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
FGFR3-206ENST00000469068 NACADO15069 1562 aa33.05■■■□□ 2.88
FGFR3-206ENST00000469068 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
FGFR3-206ENST00000469068 MYO15BQ96JP2 1530 aa32.6■■■□□ 2.81
FGFR3-206ENST00000469068 DNAJC5BQ9UF47 199 aa32.58■■■□□ 2.81
FGFR3-206ENST00000469068 UNC13AQ9UPW8 1703 aa32.54■■■□□ 2.8
FGFR3-206ENST00000469068 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
FGFR3-206ENST00000469068 ZCCHC6Q5VYS8 1495 aaKnown RBP32.35■■■□□ 2.77
FGFR3-206ENST00000469068 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
FGFR3-206ENST00000469068 DCAF1Q9Y4B6 1507 aa32.21■■■□□ 2.75
FGFR3-206ENST00000469068 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
FGFR3-206ENST00000469068 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
FGFR3-206ENST00000469068 CC2D2AQ9P2K1 1620 aa31.56■■■□□ 2.64
FGFR3-206ENST00000469068 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
FGFR3-206ENST00000469068 CECR2Q9BXF3 1484 aa31.45■■■□□ 2.62
FGFR3-206ENST00000469068 NCAPD3P42695 1498 aa30.47■■■□□ 2.47
FGFR3-206ENST00000469068 SMARCA4P51532 1647 aa30.44■■■□□ 2.46
FGFR3-206ENST00000469068 ATAD2BQ9ULI0 1458 aa30.4■■■□□ 2.46
FGFR3-206ENST00000469068 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
FGFR3-206ENST00000469068 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
FGFR3-206ENST00000469068 BAZ1AQ9NRL2 1556 aaPredicted RBP30.28■■■□□ 2.44
FGFR3-206ENST00000469068 ERCC6Q03468 1493 aa30.18■■■□□ 2.42
FGFR3-206ENST00000469068 BAZ1BQ9UIG0 1483 aaKnown RBP30.15■■■□□ 2.42
FGFR3-206ENST00000469068 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
FGFR3-206ENST00000469068 CUX2O14529 1486 aa30.09■■■□□ 2.41
FGFR3-206ENST00000469068 MROH2BQ7Z745 1585 aa30.03■■■□□ 2.4
FGFR3-206ENST00000469068 NESP48681 1621 aa30■■■□□ 2.39
FGFR3-206ENST00000469068 DNAJC5Q9H3Z4 198 aa29.9■■■□□ 2.38
FGFR3-206ENST00000469068 LAMC3Q9Y6N6 1575 aa29.83■■■□□ 2.37
FGFR3-206ENST00000469068 THOC2Q8NI27 1593 aaKnown RBP29.75■■■□□ 2.35
FGFR3-206ENST00000469068 WIZO95785 1651 aa29.69■■■□□ 2.34
FGFR3-206ENST00000469068 KIF21AQ7Z4S6 1674 aa29.67■■■□□ 2.34
FGFR3-206ENST00000469068 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
FGFR3-206ENST00000469068 CADPSQ9ULU8 1353 aa29.54■■■□□ 2.32
FGFR3-206ENST00000469068 RSF1Q96T23 1441 aaPredicted RBP29.4■■■□□ 2.3
FGFR3-206ENST00000469068 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
FGFR3-206ENST00000469068 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
FGFR3-206ENST00000469068 WDR62O43379 1518 aa29.34■■■□□ 2.29
FGFR3-206ENST00000469068 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
FGFR3-206ENST00000469068 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
FGFR3-206ENST00000469068 CFTRP13569 1480 aa29.24■■■□□ 2.27
FGFR3-206ENST00000469068 PRDM2Q13029 1718 aa29.04■■■□□ 2.24
FGFR3-206ENST00000469068 URB2Q14146 1524 aaKnown RBP29■■■□□ 2.23
FGFR3-206ENST00000469068 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
FGFR3-206ENST00000469068 TOPBP1Q92547 1522 aa28.7■■■□□ 2.19
FGFR3-206ENST00000469068 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
FGFR3-206ENST00000469068 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
FGFR3-206ENST00000469068 DNMBPQ6XZF7 1577 aa28.63■■■□□ 2.17
FGFR3-206ENST00000469068 OSCARQ8IYS5 282 aa28.63■■■□□ 2.17
FGFR3-206ENST00000469068 ZNF608Q9ULD9 1512 aaPredicted RBP28.63■■■□□ 2.17
FGFR3-206ENST00000469068 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
FGFR3-206ENST00000469068 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
FGFR3-206ENST00000469068 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
FGFR3-206ENST00000469068 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
FGFR3-206ENST00000469068 POLA1P09884 1462 aaPredicted RBP28.41■■■□□ 2.14
FGFR3-206ENST00000469068 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
FGFR3-206ENST00000469068 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
FGFR3-206ENST00000469068 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
FGFR3-206ENST00000469068 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.132e-9■■■■■ 30.3
FGFR3-206ENST00000469068 CHD1O14646 1710 aa28.31■■■□□ 2.12
FGFR3-206ENST00000469068 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
FGFR3-206ENST00000469068 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
FGFR3-206ENST00000469068 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.11
FGFR3-206ENST00000469068 SOGA1O94964 1423 aa28.25■■■□□ 2.11
FGFR3-206ENST00000469068 CUX1P39880 1505 aa28.23■■■□□ 2.11
FGFR3-206ENST00000469068 WDR97A6NE52 1622 aa28.2■■■□□ 2.1
FGFR3-206ENST00000469068 TDRD9Q8NDG6 1382 aaKnown RBP28.18■■■□□ 2.1
FGFR3-206ENST00000469068 FBLN2P98095 1184 aa28.14■■■□□ 2.1
FGFR3-206ENST00000469068 SNAPC4Q5SXM2 1469 aa28.13■■■□□ 2.09
FGFR3-206ENST00000469068 MAGI1Q96QZ7 1491 aaPredicted RBP28.04■■■□□ 2.08
FGFR3-206ENST00000469068 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
FGFR3-206ENST00000469068 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
FGFR3-206ENST00000469068 PBRM1Q86U86 1689 aa27.99■■■□□ 2.07
FGFR3-206ENST00000469068 CYB5RLQ6IPT4 315 aa27.97■■■□□ 2.07
FGFR3-206ENST00000469068 SYNJ1O43426 1573 aa27.97■■■□□ 2.07
FGFR3-206ENST00000469068 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
FGFR3-206ENST00000469068 SYNJ2O15056 1496 aa27.95■■■□□ 2.06
FGFR3-206ENST00000469068 CHMP7Q8WUX9 453 aaPredicted RBP27.94■■■□□ 2.06
FGFR3-206ENST00000469068 GAPVD1Q14C86 1478 aa27.94■■■□□ 2.06
FGFR3-206ENST00000469068 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
FGFR3-206ENST00000469068 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
FGFR3-206ENST00000469068 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
FGFR3-206ENST00000469068 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
FGFR3-206ENST00000469068 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
FGFR3-206ENST00000469068 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
FGFR3-206ENST00000469068 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
FGFR3-206ENST00000469068 TRHP20396 242 aaPredicted RBP27.66■■■□□ 2.02
FGFR3-206ENST00000469068 CEP170Q5SW79 1584 aa27.6■■■□□ 2.01
FGFR3-206ENST00000469068 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
FGFR3-206ENST00000469068 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2
FGFR3-206ENST00000469068 NUP160Q12769 1436 aa27.58■■■□□ 2
FGFR3-206ENST00000469068 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
FGFR3-206ENST00000469068 SHROOM2Q13796 1616 aa27.47■■□□□ 1.99
FGFR3-206ENST00000469068 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
FGFR3-206ENST00000469068 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
FGFR3-206ENST00000469068 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
FGFR3-206ENST00000469068 CUL7Q14999 1698 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms