Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.441e-7■■■□□ 15.7
PABPN1Q86U42 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.041e-7■■■□□ 15.7
PABPN1Q86U42 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC22.48■■□□□ 1.191e-7■■■□□ 15.7
PABPN1Q86U42 TPM2-208ENST00000607559 518 ntTSL 221.84■■□□□ 1.096e-7■■■□□ 15.6
PABPN1Q86U42 EPS8L2-216ENST00000530118 561 ntTSL 333.98■■■■□ 3.032e-11■■■□□ 15.6
PABPN1Q86U42 SLC12A4-213ENST00000573702 633 ntTSL 429.16■■■□□ 2.263e-6■■■□□ 15.6
PABPN1Q86U42 SLC12A4-211ENST00000572766 515 ntTSL 426.1■■□□□ 1.773e-6■■■□□ 15.6
PABPN1Q86U42 SLC12A4-214ENST00000574665 847 ntTSL 524.77■■□□□ 1.563e-6■■■□□ 15.6
PABPN1Q86U42 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.416e-7■■■□□ 15.6
PABPN1Q86U42 AMDHD2-215ENST00000568263 1482 ntTSL 236.73■■■■□ 3.472e-6■■■□□ 15.6
PABPN1Q86U42 PLCG1-207ENST00000473632 412 ntTSL 532.35■■■□□ 2.771e-8■■■□□ 15.6
PABPN1Q86U42 STK11-202ENST00000585465 3554 ntTSL 520.72■□□□□ 0.912e-8■■■□□ 15.6
PABPN1Q86U42 EEF1D-219ENST00000527741 3718 ntTSL 215.92■□□□□ 0.141e-7■■■□□ 15.6
PABPN1Q86U42 SYMPK-207ENST00000596824 653 ntTSL 323.72■■□□□ 1.391e-6■■■□□ 15.6
PABPN1Q86U42 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.025e-7■■■□□ 15.6
PABPN1Q86U42 STAT6-212ENST00000554764 2777 ntTSL 219.47■□□□□ 0.715e-7■■■□□ 15.6
PABPN1Q86U42 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.75e-7■■■□□ 15.6
PABPN1Q86U42 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC19.09■□□□□ 0.655e-7■■■□□ 15.6
PABPN1Q86U42 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC32.11■■■□□ 2.732e-13■■■□□ 15.6
PABPN1Q86U42 ARFGAP1-218ENST00000523460 572 ntTSL 429.59■■■□□ 2.332e-13■■■□□ 15.6
PABPN1Q86U42 MCF2L-221ENST00000469415 3027 ntTSL 1 (best)28.67■■■□□ 2.182e-7■■■□□ 15.6
PABPN1Q86U42 MCF2L-229ENST00000488765 3205 ntTSL 224.32■■□□□ 1.482e-7■■■□□ 15.6
PABPN1Q86U42 SYMPK-209ENST00000598155 1603 ntTSL 541.11■■■■■ 4.171e-6■■■□□ 15.6
PABPN1Q86U42 GGT7-203ENST00000469018 1064 ntTSL 529.44■■■□□ 2.36e-7■■■□□ 15.6
PABPN1Q86U42 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC27.14■■□□□ 1.943e-7■■■□□ 15.6
PABPN1Q86U42 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.653e-7■■■□□ 15.6
PABPN1Q86U42 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.653e-7■■■□□ 15.6
PABPN1Q86U42 FANCA-210ENST00000563318 605 ntTSL 524.55■■□□□ 1.521e-7■■■□□ 15.6
PABPN1Q86U42 SLC25A39-216ENST00000592857 837 ntTSL 343.28■■■■■ 4.523e-6■■■□□ 15.6
PABPN1Q86U42 SLC25A39-208ENST00000586633 566 ntTSL 337.05■■■■□ 3.523e-6■■■□□ 15.6
PABPN1Q86U42 ACAP3-208ENST00000472541 1946 ntTSL 535.49■■■■□ 3.273e-6■■■□□ 15.6
PABPN1Q86U42 ADPGK-212ENST00000569517 951 ntTSL 534.34■■■■□ 3.091e-7■■■□□ 15.6
PABPN1Q86U42 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC34.15■■■■□ 3.068e-7■■■□□ 15.6
PABPN1Q86U42 ADPGK-206ENST00000563907 1041 ntTSL 333.33■■■□□ 2.931e-7■■■□□ 15.6
PABPN1Q86U42 CUL9-208ENST00000504647 567 ntTSL 232.34■■■□□ 2.771e-7■■■□□ 15.6
PABPN1Q86U42 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.471e-7■■■□□ 15.6
PABPN1Q86U42 SLC25A39-214ENST00000591151 636 ntTSL 230.42■■■□□ 2.463e-6■■■□□ 15.6
PABPN1Q86U42 ADPGK-213ENST00000569534 2262 ntTSL 230.35■■■□□ 2.451e-7■■■□□ 15.6
PABPN1Q86U42 ACAP3-203ENST00000354980 582 ntTSL 526.97■■□□□ 1.913e-6■■■□□ 15.6
PABPN1Q86U42 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.91e-7■■■□□ 15.6
PABPN1Q86U42 CUL9-211ENST00000506830 1978 ntTSL 1 (best)26.89■■□□□ 1.891e-7■■■□□ 15.6
PABPN1Q86U42 ADPGK-210ENST00000567941 2716 ntTSL 1 (best)25.69■■□□□ 1.71e-7■■■□□ 15.6
PABPN1Q86U42 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC25.04■■□□□ 1.61e-7■■■□□ 15.6
PABPN1Q86U42 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.346e-11■■■□□ 15.6
PABPN1Q86U42 CUL9-206ENST00000503766 2999 ntTSL 222.95■■□□□ 1.261e-7■■■□□ 15.6
PABPN1Q86U42 ADPGK-214ENST00000569693 1820 ntTSL 1 (best)22.43■■□□□ 1.181e-7■■■□□ 15.6
PABPN1Q86U42 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.031e-7■■■□□ 15.6
PABPN1Q86U42 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC21.45■■□□□ 1.021e-7■■■□□ 15.6
PABPN1Q86U42 NUP85-220ENST00000583070 907 ntTSL 520.69■□□□□ 0.96e-11■■■□□ 15.6
PABPN1Q86U42 GOLGA2P5-206ENST00000545820 4871 ntTSL 219.86■□□□□ 0.771e-7■■■□□ 15.6
PABPN1Q86U42 GOLGA2P5-203ENST00000397112 2632 ntTSL 2 BASIC19.86■□□□□ 0.771e-7■■■□□ 15.6
PABPN1Q86U42 GOLGA2P5-201ENST00000266746 2395 ntBASIC19.76■□□□□ 0.751e-7■■■□□ 15.6
PABPN1Q86U42 GPX2-202ENST00000553522 1134 ntTSL 1 (best)19.55■□□□□ 0.721e-7■■■□□ 15.6
PABPN1Q86U42 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC18.96■□□□□ 0.636e-11■■■□□ 15.6
PABPN1Q86U42 NUP85-216ENST00000581104 2233 ntTSL 217.9■□□□□ 0.466e-11■■■□□ 15.6
PABPN1Q86U42 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.411e-7■■■□□ 15.6
PABPN1Q86U42 GOLGA2P5-205ENST00000537988 5266 ntTSL 217.35■□□□□ 0.371e-7■■■□□ 15.6
PABPN1Q86U42 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC17.23■□□□□ 0.356e-11■■■□□ 15.6
PABPN1Q86U42 GOLGA2P5-202ENST00000304813 3105 ntTSL 2 BASIC16.71■□□□□ 0.271e-7■■■□□ 15.6
PABPN1Q86U42 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC16.54■□□□□ 0.246e-11■■■□□ 15.6
PABPN1Q86U42 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.211e-7■■■□□ 15.6
PABPN1Q86U42 CUL9-218ENST00000515773 8150 ntTSL 216■□□□□ 0.151e-7■■■□□ 15.6
PABPN1Q86U42 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC15.94■□□□□ 0.141e-7■■■□□ 15.6
PABPN1Q86U42 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC14.82□□□□□ -0.041e-7■■■□□ 15.6
PABPN1Q86U42 ADPGK-204ENST00000562621 4576 ntTSL 1 (best)12.94□□□□□ -0.341e-7■■■□□ 15.6
PABPN1Q86U42 NUP85-209ENST00000578987 388 ntTSL 38.16□□□□□ -1.16e-11■■■□□ 15.6
PABPN1Q86U42 NUP85-225ENST00000584155 300 ntTSL 27.98□□□□□ -1.136e-11■■■□□ 15.6
PABPN1Q86U42 RNU6-36P-201ENST00000384172 107 ntBASIC7.93□□□□□ -1.141e-7■■■□□ 15.6
PABPN1Q86U42 NUP85-213ENST00000579838 373 ntTSL 47.89□□□□□ -1.156e-11■■■□□ 15.6
PABPN1Q86U42 NUP85-214ENST00000579900 528 ntTSL 56.73□□□□□ -1.336e-11■■■□□ 15.6
PABPN1Q86U42 GET4-203ENST00000412734 873 ntTSL 231.7■■■□□ 2.673e-7■■■□□ 15.6
PABPN1Q86U42 AMPD2-220ENST00000528958 714 ntTSL 231.62■■■□□ 2.655e-7■■■□□ 15.5
PABPN1Q86U42 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.254e-7■■■□□ 15.5
PABPN1Q86U42 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.792e-6■■■□□ 15.5
PABPN1Q86U42 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC29.61■■■□□ 2.332e-6■■■□□ 15.5
PABPN1Q86U42 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.042e-6■■■□□ 15.5
PABPN1Q86U42 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.022e-6■■■□□ 15.5
PABPN1Q86U42 TBC1D17-203ENST00000594984 1441 ntTSL 531.01■■■□□ 2.552e-7■■■□□ 15.5
PABPN1Q86U42 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC30.9■■■□□ 2.547e-8■■■□□ 15.5
PABPN1Q86U42 SLC25A39-213ENST00000591006 2217 ntTSL 222.04■■□□□ 1.125e-7■■■□□ 15.5
PABPN1Q86U42 LINC01089-210ENST00000543167 1059 ntTSL 236.75■■■■□ 3.473e-8■■■□□ 15.5
PABPN1Q86U42 LINC01089-208ENST00000541694 875 ntTSL 228.3■■■□□ 2.123e-8■■■□□ 15.5
PABPN1Q86U42 NOL3-213ENST00000568503 1511 ntTSL 542.92■■■■■ 4.461e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-206ENST00000564992 677 ntAPPRIS ALT2 TSL 239.95■■■■□ 3.991e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-203ENST00000563439 642 ntAPPRIS ALT2 TSL 339.03■■■■□ 3.841e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-209ENST00000566871 752 ntTSL 238.37■■■■□ 3.731e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC38.19■■■■□ 3.71e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC37.38■■■■□ 3.571e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-207ENST00000565560 579 ntAPPRIS ALT2 TSL 336.11■■■■□ 3.371e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC36.01■■■■□ 3.351e-6■■■□□ 15.5
PABPN1Q86U42 NOL3-202ENST00000563258 794 ntTSL 526.31■■□□□ 1.81e-6■■■□□ 15.5
PABPN1Q86U42 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.032e-7■■■□□ 15.5
PABPN1Q86U42 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.862e-7■■■□□ 15.5
PABPN1Q86U42 TTC17-201ENST00000039989 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.531e-7■■■□□ 15.5
PABPN1Q86U42 TTC17-212ENST00000533072 2607 ntTSL 1 (best)10.01□□□□□ -0.811e-7■■■□□ 15.5
PABPN1Q86U42 TTC17-207ENST00000525543 3142 ntTSL 29.8□□□□□ -0.841e-7■■■□□ 15.5
PABPN1Q86U42 RBM5-212ENST00000464087 5616 ntTSL 213.02□□□□□ -0.332e-8■■■□□ 15.5
PABPN1Q86U42 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.442e-8■■■□□ 15.5
PABPN1Q86U42 FTCD-210ENST00000488577 447 ntTSL 338.81■■■■□ 3.82e-12■■■□□ 15.5
PABPN1Q86U42 NECAB3-206ENST00000477778 462 ntTSL 326.1■■□□□ 1.772e-7■■■□□ 15.5
Retrieved 100 of 8,254 protein–RNA pairs in 264.2 ms