RNA–Protein interactions for RNA: ENST00000579324.5

NUP85-211, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 2,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-211ENST00000579324 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
NUP85-211ENST00000579324 CCDC180Q9P1Z9 1646 aa20.48■□□□□ 0.87
NUP85-211ENST00000579324 ABCC9O60706 1549 aa20.22■□□□□ 0.83
NUP85-211ENST00000579324 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
NUP85-211ENST00000579324 SHROOM4Q9ULL8 1493 aa19.65■□□□□ 0.74
NUP85-211ENST00000579324 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
NUP85-211ENST00000579324 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
NUP85-211ENST00000579324 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
NUP85-211ENST00000579324 NACADO15069 1562 aa19.27■□□□□ 0.68
NUP85-211ENST00000579324 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
NUP85-211ENST00000579324 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
NUP85-211ENST00000579324 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.636e-11■■■□□ 15.6
NUP85-211ENST00000579324 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
NUP85-211ENST00000579324 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
NUP85-211ENST00000579324 BICRAQ9NZM4 1560 aa18.75■□□□□ 0.59
NUP85-211ENST00000579324 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
NUP85-211ENST00000579324 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
NUP85-211ENST00000579324 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
NUP85-211ENST00000579324 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
NUP85-211ENST00000579324 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
NUP85-211ENST00000579324 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
NUP85-211ENST00000579324 BAZ1AQ9NRL2 1556 aaPredicted RBP18.27■□□□□ 0.51
NUP85-211ENST00000579324 WIZO95785 1651 aa18.24■□□□□ 0.51
NUP85-211ENST00000579324 CC2D2AQ9P2K1 1620 aa18.22■□□□□ 0.51
NUP85-211ENST00000579324 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
NUP85-211ENST00000579324 TOP2AP11388 1531 aaKnown RBP18.06■□□□□ 0.48
NUP85-211ENST00000579324 PEG3Q9GZU2 1588 aa17.94■□□□□ 0.46
NUP85-211ENST00000579324 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
NUP85-211ENST00000579324 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
NUP85-211ENST00000579324 LOC105371045A0A1W2PR82 267 aa17.89■□□□□ 0.45
NUP85-211ENST00000579324 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
NUP85-211ENST00000579324 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
NUP85-211ENST00000579324 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
NUP85-211ENST00000579324 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
NUP85-211ENST00000579324 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
NUP85-211ENST00000579324 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
NUP85-211ENST00000579324 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
NUP85-211ENST00000579324 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
NUP85-211ENST00000579324 NESP48681 1621 aa17.49■□□□□ 0.39
NUP85-211ENST00000579324 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
NUP85-211ENST00000579324 HRCP23327 699 aa17.46■□□□□ 0.39
NUP85-211ENST00000579324 EEA1Q15075 1411 aa17.46■□□□□ 0.39
NUP85-211ENST00000579324 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
NUP85-211ENST00000579324 SOGA1O94964 1423 aa17.42■□□□□ 0.38
NUP85-211ENST00000579324 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
NUP85-211ENST00000579324 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
NUP85-211ENST00000579324 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
NUP85-211ENST00000579324 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.37
NUP85-211ENST00000579324 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.36
NUP85-211ENST00000579324 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
NUP85-211ENST00000579324 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
NUP85-211ENST00000579324 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
NUP85-211ENST00000579324 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
NUP85-211ENST00000579324 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
NUP85-211ENST00000579324 MYT1Q01538 1121 aa17.26■□□□□ 0.35
NUP85-211ENST00000579324 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
NUP85-211ENST00000579324 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
NUP85-211ENST00000579324 KIF21BO75037 1637 aa17.25■□□□□ 0.35
NUP85-211ENST00000579324 CFTRP13569 1480 aa17.24■□□□□ 0.35
NUP85-211ENST00000579324 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
NUP85-211ENST00000579324 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
NUP85-211ENST00000579324 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
NUP85-211ENST00000579324 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
NUP85-211ENST00000579324 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
NUP85-211ENST00000579324 CUX1P39880 1505 aa17.15■□□□□ 0.34
NUP85-211ENST00000579324 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.34
NUP85-211ENST00000579324 CUX2O14529 1486 aa17.14■□□□□ 0.33
NUP85-211ENST00000579324 THOC2Q8NI27 1593 aaKnown RBP17.13■□□□□ 0.33
NUP85-211ENST00000579324 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
NUP85-211ENST00000579324 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
NUP85-211ENST00000579324 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
NUP85-211ENST00000579324 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
NUP85-211ENST00000579324 PRXQ9BXM0 1461 aa17.02■□□□□ 0.32
NUP85-211ENST00000579324 PPARGC1BQ86YN6 1023 aaKnown RBP16.99■□□□□ 0.31
NUP85-211ENST00000579324 WDR62O43379 1518 aa16.99■□□□□ 0.31
NUP85-211ENST00000579324 CLIP1P30622 1438 aa16.98■□□□□ 0.31
NUP85-211ENST00000579324 KIF27Q86VH2 1401 aa16.96■□□□□ 0.31
NUP85-211ENST00000579324 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
NUP85-211ENST00000579324 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
NUP85-211ENST00000579324 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
NUP85-211ENST00000579324 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
NUP85-211ENST00000579324 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
NUP85-211ENST00000579324 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
NUP85-211ENST00000579324 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
NUP85-211ENST00000579324 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
NUP85-211ENST00000579324 IGF1RP08069 1367 aa16.8■□□□□ 0.28
NUP85-211ENST00000579324 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
NUP85-211ENST00000579324 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
NUP85-211ENST00000579324 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
NUP85-211ENST00000579324 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
NUP85-211ENST00000579324 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
NUP85-211ENST00000579324 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
NUP85-211ENST00000579324 CARMIL1Q5VZK9 1371 aa16.7■□□□□ 0.26
NUP85-211ENST00000579324 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
NUP85-211ENST00000579324 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
NUP85-211ENST00000579324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
NUP85-211ENST00000579324 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■■■□ 20.4
NUP85-211ENST00000579324 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
NUP85-211ENST00000579324 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
NUP85-211ENST00000579324 APLP2Q06481 763 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms