RNA–Protein interactions for RNA: ENST00000472541.5

ACAP3-208, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 5

Gene ACAP3, Length 1,946 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-208ENST00000472541 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
ACAP3-208ENST00000472541 CCDC180Q9P1Z9 1646 aa39.2■■■■□ 3.87
ACAP3-208ENST00000472541 ABCC9O60706 1549 aa37.68■■■■□ 3.62
ACAP3-208ENST00000472541 ZCCHC6Q5VYS8 1495 aaKnown RBP37.5■■■■□ 3.59
ACAP3-208ENST00000472541 DCAF8L2P0C7V8 631 aa37.32■■■■□ 3.57
ACAP3-208ENST00000472541 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
ACAP3-208ENST00000472541 MYO15BQ96JP2 1530 aa36.66■■■■□ 3.46
ACAP3-208ENST00000472541 NACADO15069 1562 aa36.65■■■■□ 3.46
ACAP3-208ENST00000472541 RB1CC1Q8TDY2 1594 aa36.47■■■■□ 3.43
ACAP3-208ENST00000472541 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
ACAP3-208ENST00000472541 SCRIBQ14160 1630 aa36.12■■■■□ 3.37
ACAP3-208ENST00000472541 UNC13AQ9UPW8 1703 aa35.8■■■■□ 3.32
ACAP3-208ENST00000472541 PABPN1Q86U42 306 aaKnown RBP eCLIP35.49■■■■□ 3.273e-6■■■□□ 15.6
ACAP3-208ENST00000472541 BICRAQ9NZM4 1560 aa35.44■■■■□ 3.26
ACAP3-208ENST00000472541 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
ACAP3-208ENST00000472541 SUPT5HO00267 1087 aaKnown RBP34.71■■■■□ 3.15
ACAP3-208ENST00000472541 MROH2BQ7Z745 1585 aa34.63■■■■□ 3.13
ACAP3-208ENST00000472541 RSF1Q96T23 1441 aaPredicted RBP34.59■■■■□ 3.13
ACAP3-208ENST00000472541 BAZ1AQ9NRL2 1556 aaPredicted RBP34.58■■■■□ 3.13
ACAP3-208ENST00000472541 SMARCA4P51532 1647 aa34.53■■■■□ 3.12
ACAP3-208ENST00000472541 EIF4G1Q04637 1599 aaKnown RBP34.4■■■■□ 3.1
ACAP3-208ENST00000472541 WIZO95785 1651 aa34.33■■■■□ 3.09
ACAP3-208ENST00000472541 ATAD2BQ9ULI0 1458 aa34.09■■■■□ 3.05
ACAP3-208ENST00000472541 PEG3Q9GZU2 1588 aa34.07■■■■□ 3.05
ACAP3-208ENST00000472541 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
ACAP3-208ENST00000472541 SMARCA2P51531 1590 aa34.01■■■■□ 3.03
ACAP3-208ENST00000472541 TOP2AP11388 1531 aaKnown RBP33.88■■■■□ 3.01
ACAP3-208ENST00000472541 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
ACAP3-208ENST00000472541 NCAPD3P42695 1498 aa33.85■■■■□ 3.01
ACAP3-208ENST00000472541 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
ACAP3-208ENST00000472541 HMGXB3Q12766 1538 aa33.73■■■□□ 2.99
ACAP3-208ENST00000472541 CCDC88BA6NC98 1476 aa33.59■■■□□ 2.97
ACAP3-208ENST00000472541 CADPSQ9ULU8 1353 aa32.99■■■□□ 2.87
ACAP3-208ENST00000472541 CFTRP13569 1480 aa32.98■■■□□ 2.87
ACAP3-208ENST00000472541 NESP48681 1621 aa32.94■■■□□ 2.86
ACAP3-208ENST00000472541 CHIC1Q5VXU3 224 aa32.91■■■□□ 2.86
ACAP3-208ENST00000472541 ABCC8Q09428 1581 aa32.77■■■□□ 2.84
ACAP3-208ENST00000472541 LAMC3Q9Y6N6 1575 aa32.77■■■□□ 2.84
ACAP3-208ENST00000472541 PRDM2Q13029 1718 aa32.74■■■□□ 2.83
ACAP3-208ENST00000472541 FANCD2Q9BXW9 1451 aa32.63■■■□□ 2.81
ACAP3-208ENST00000472541 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
ACAP3-208ENST00000472541 PDS5BQ9NTI5 1447 aa32.55■■■□□ 2.8
ACAP3-208ENST00000472541 WRNQ14191 1432 aaPredicted RBP eCLIP32.55■■■□□ 2.84e-7■■■□□ 16.7
ACAP3-208ENST00000472541 KIF21AQ7Z4S6 1674 aa32.49■■■□□ 2.79
ACAP3-208ENST00000472541 SYNJ1O43426 1573 aa32.47■■■□□ 2.79
ACAP3-208ENST00000472541 CEP164Q9UPV0 1460 aa32.45■■■□□ 2.79
ACAP3-208ENST00000472541 CUX1P39880 1505 aa32.4■■■□□ 2.78
ACAP3-208ENST00000472541 TOP2BQ02880 1626 aa32.32■■■□□ 2.76
ACAP3-208ENST00000472541 ERCC6Q03468 1493 aa32.31■■■□□ 2.76
ACAP3-208ENST00000472541 BIVM-ERCC5R4GMW8 1640 aa32.28■■■□□ 2.76
ACAP3-208ENST00000472541 URB2Q14146 1524 aaKnown RBP32.27■■■□□ 2.76
ACAP3-208ENST00000472541 TOPBP1Q92547 1522 aa32.22■■■□□ 2.75
ACAP3-208ENST00000472541 DNMBPQ6XZF7 1577 aa32.21■■■□□ 2.75
ACAP3-208ENST00000472541 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
ACAP3-208ENST00000472541 FGD5Q6ZNL6 1462 aa32.12■■■□□ 2.73
ACAP3-208ENST00000472541 FAM9AQ8IZU1 332 aaPredicted RBP32.09■■■□□ 2.73
ACAP3-208ENST00000472541 SOGA1O94964 1423 aa32.05■■■□□ 2.72
ACAP3-208ENST00000472541 THOC2Q8NI27 1593 aaKnown RBP32.05■■■□□ 2.72
ACAP3-208ENST00000472541 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
ACAP3-208ENST00000472541 WDR62O43379 1518 aa32.01■■■□□ 2.71
ACAP3-208ENST00000472541 RUSC2Q8N2Y8 1516 aa31.99■■■□□ 2.71
ACAP3-208ENST00000472541 RAD54L2Q9Y4B4 1467 aa31.98■■■□□ 2.71
ACAP3-208ENST00000472541 CUX2O14529 1486 aa31.85■■■□□ 2.69
ACAP3-208ENST00000472541 ABCA10Q8WWZ4 1543 aa31.78■■■□□ 2.68
ACAP3-208ENST00000472541 TARBP1Q13395 1621 aaKnown RBP31.77■■■□□ 2.68
ACAP3-208ENST00000472541 KIF27Q86VH2 1401 aa31.75■■■□□ 2.67
ACAP3-208ENST00000472541 EHMT2Q96KQ7 1210 aa31.75■■■□□ 2.67
ACAP3-208ENST00000472541 LOC105371045A0A1W2PR82 267 aa31.73■■■□□ 2.67
ACAP3-208ENST00000472541 CSRNP3Q8WYN3 585 aa31.73■■■□□ 2.67
ACAP3-208ENST00000472541 EEA1Q15075 1411 aa31.72■■■□□ 2.67
ACAP3-208ENST00000472541 TDRD9Q8NDG6 1382 aaKnown RBP31.72■■■□□ 2.67
ACAP3-208ENST00000472541 WDR97A6NE52 1622 aa31.72■■■□□ 2.67
ACAP3-208ENST00000472541 IFT140Q96RY7 1462 aa31.68■■■□□ 2.66
ACAP3-208ENST00000472541 ZNF608Q9ULD9 1512 aaPredicted RBP31.63■■■□□ 2.65
ACAP3-208ENST00000472541 AQRO60306 1485 aaKnown RBP eCLIP31.6■■■□□ 2.654e-7■■■■□ 21.2
ACAP3-208ENST00000472541 IGF1RP08069 1367 aa31.57■■■□□ 2.64
ACAP3-208ENST00000472541 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
ACAP3-208ENST00000472541 GAPVD1Q14C86 1478 aa31.56■■■□□ 2.64
ACAP3-208ENST00000472541 EIF4G3O43432 1585 aaKnown RBP31.45■■■□□ 2.63
ACAP3-208ENST00000472541 PRXQ9BXM0 1461 aa31.41■■■□□ 2.62
ACAP3-208ENST00000472541 PBRM1Q86U86 1689 aa31.4■■■□□ 2.62
ACAP3-208ENST00000472541 RAPGEF2Q9Y4G8 1499 aa31.4■■■□□ 2.62
ACAP3-208ENST00000472541 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
ACAP3-208ENST00000472541 ERICH3Q5RHP9 1530 aa31.39■■■□□ 2.62
ACAP3-208ENST00000472541 KIF21BO75037 1637 aa31.38■■■□□ 2.61
ACAP3-208ENST00000472541 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
ACAP3-208ENST00000472541 GOLGA3Q08378 1498 aa31.32■■■□□ 2.6
ACAP3-208ENST00000472541 UBTFP17480 764 aaKnown RBP31.32■■■□□ 2.6
ACAP3-208ENST00000472541 CUL7Q14999 1698 aa31.28■■■□□ 2.6
ACAP3-208ENST00000472541 SNAPC4Q5SXM2 1469 aa31.25■■■□□ 2.59
ACAP3-208ENST00000472541 ADAMTS12P58397 1594 aa31.19■■■□□ 2.58
ACAP3-208ENST00000472541 FHAD1B1AJZ9 1412 aa31.18■■■□□ 2.58
ACAP3-208ENST00000472541 TNIKQ9UKE5 1360 aa31.14■■■□□ 2.58
ACAP3-208ENST00000472541 MAGI1Q96QZ7 1491 aaPredicted RBP31.13■■■□□ 2.57
ACAP3-208ENST00000472541 FBLN2P98095 1184 aa31.1■■■□□ 2.57
ACAP3-208ENST00000472541 RANGAP1P46060 587 aaPredicted RBP31.08■■■□□ 2.57
ACAP3-208ENST00000472541 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
ACAP3-208ENST00000472541 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
ACAP3-208ENST00000472541 GRIN2AQ12879 1464 aa30.99■■■□□ 2.55
ACAP3-208ENST00000472541 CEP162Q5TB80 1403 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms