RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 NISCHQ9Y2I1 1504 aa30.09■■■□□ 2.41
NUP85-201ENST00000245544 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
NUP85-201ENST00000245544 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
NUP85-201ENST00000245544 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
NUP85-201ENST00000245544 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
NUP85-201ENST00000245544 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
NUP85-201ENST00000245544 ABCC9O60706 1549 aa24.71■■□□□ 1.55
NUP85-201ENST00000245544 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
NUP85-201ENST00000245544 NACADO15069 1562 aa24.26■■□□□ 1.47
NUP85-201ENST00000245544 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
NUP85-201ENST00000245544 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
NUP85-201ENST00000245544 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
NUP85-201ENST00000245544 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
NUP85-201ENST00000245544 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
NUP85-201ENST00000245544 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
NUP85-201ENST00000245544 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
NUP85-201ENST00000245544 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.346e-11■■■□□ 15.6
NUP85-201ENST00000245544 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
NUP85-201ENST00000245544 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
NUP85-201ENST00000245544 WIZO95785 1651 aa23.15■■□□□ 1.3
NUP85-201ENST00000245544 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
NUP85-201ENST00000245544 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
NUP85-201ENST00000245544 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
NUP85-201ENST00000245544 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
NUP85-201ENST00000245544 ATAD2BQ9ULI0 1458 aa22.7■■□□□ 1.22
NUP85-201ENST00000245544 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
NUP85-201ENST00000245544 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
NUP85-201ENST00000245544 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
NUP85-201ENST00000245544 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
NUP85-201ENST00000245544 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
NUP85-201ENST00000245544 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
NUP85-201ENST00000245544 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
NUP85-201ENST00000245544 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
NUP85-201ENST00000245544 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
NUP85-201ENST00000245544 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
NUP85-201ENST00000245544 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
NUP85-201ENST00000245544 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
NUP85-201ENST00000245544 CFTRP13569 1480 aa22■■□□□ 1.11
NUP85-201ENST00000245544 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
NUP85-201ENST00000245544 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
NUP85-201ENST00000245544 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
NUP85-201ENST00000245544 SOGA1O94964 1423 aa21.9■■□□□ 1.1
NUP85-201ENST00000245544 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
NUP85-201ENST00000245544 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
NUP85-201ENST00000245544 PRDM2Q13029 1718 aa21.83■■□□□ 1.09
NUP85-201ENST00000245544 TOP2BQ02880 1626 aa21.81■■□□□ 1.08
NUP85-201ENST00000245544 CUX1P39880 1505 aa21.77■■□□□ 1.08
NUP85-201ENST00000245544 NESP48681 1621 aa21.77■■□□□ 1.08
NUP85-201ENST00000245544 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
NUP85-201ENST00000245544 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
NUP85-201ENST00000245544 EEA1Q15075 1411 aa21.69■■□□□ 1.06
NUP85-201ENST00000245544 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
NUP85-201ENST00000245544 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
NUP85-201ENST00000245544 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
NUP85-201ENST00000245544 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
NUP85-201ENST00000245544 GOLGA3Q08378 1498 aa21.47■■□□□ 1.03
NUP85-201ENST00000245544 DNMBPQ6XZF7 1577 aa21.46■■□□□ 1.03
NUP85-201ENST00000245544 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
NUP85-201ENST00000245544 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
NUP85-201ENST00000245544 KIF21BO75037 1637 aa21.46■■□□□ 1.03
NUP85-201ENST00000245544 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
NUP85-201ENST00000245544 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
NUP85-201ENST00000245544 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
NUP85-201ENST00000245544 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
NUP85-201ENST00000245544 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
NUP85-201ENST00000245544 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
NUP85-201ENST00000245544 CUX2O14529 1486 aa21.39■■□□□ 1.02
NUP85-201ENST00000245544 CEP162Q5TB80 1403 aa21.39■■□□□ 1.01
NUP85-201ENST00000245544 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
NUP85-201ENST00000245544 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
NUP85-201ENST00000245544 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
NUP85-201ENST00000245544 IGF1RP08069 1367 aa21.29■■□□□ 1
NUP85-201ENST00000245544 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
NUP85-201ENST00000245544 ERICH3Q5RHP9 1530 aa21.27■■□□□ 1
NUP85-201ENST00000245544 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
NUP85-201ENST00000245544 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
NUP85-201ENST00000245544 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
NUP85-201ENST00000245544 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
NUP85-201ENST00000245544 PPARGC1BQ86YN6 1023 aaKnown RBP21.18■□□□□ 0.98
NUP85-201ENST00000245544 CLIP1P30622 1438 aa21.18■□□□□ 0.98
NUP85-201ENST00000245544 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
NUP85-201ENST00000245544 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
NUP85-201ENST00000245544 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
NUP85-201ENST00000245544 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
NUP85-201ENST00000245544 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
NUP85-201ENST00000245544 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
NUP85-201ENST00000245544 WDR62O43379 1518 aa21.07■□□□□ 0.96
NUP85-201ENST00000245544 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
NUP85-201ENST00000245544 CUL7Q14999 1698 aa21■□□□□ 0.95
NUP85-201ENST00000245544 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
NUP85-201ENST00000245544 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
NUP85-201ENST00000245544 AQRO60306 1485 aaKnown RBP eCLIP20.99■□□□□ 0.951e-6■■■■□ 20.4
NUP85-201ENST00000245544 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
NUP85-201ENST00000245544 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
NUP85-201ENST00000245544 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
NUP85-201ENST00000245544 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
NUP85-201ENST00000245544 ARHGAP35Q9NRY4 1499 aa20.94■□□□□ 0.94
NUP85-201ENST00000245544 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
NUP85-201ENST00000245544 GRIN2BQ13224 1484 aa20.84■□□□□ 0.93
NUP85-201ENST00000245544 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms