RNA–Protein interactions for RNA: ENST00000574665.5

SLC12A4-214, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 847 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-214ENST00000574665 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
SLC12A4-214ENST00000574665 ABCC9O60706 1549 aa26.56■■□□□ 1.84
SLC12A4-214ENST00000574665 CCDC180Q9P1Z9 1646 aa26.35■■□□□ 1.81
SLC12A4-214ENST00000574665 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
SLC12A4-214ENST00000574665 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
SLC12A4-214ENST00000574665 NACADO15069 1562 aa25.02■■□□□ 1.6
SLC12A4-214ENST00000574665 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
SLC12A4-214ENST00000574665 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.563e-6■■■□□ 15.6
SLC12A4-214ENST00000574665 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
SLC12A4-214ENST00000574665 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
SLC12A4-214ENST00000574665 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
SLC12A4-214ENST00000574665 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
SLC12A4-214ENST00000574665 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
SLC12A4-214ENST00000574665 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
SLC12A4-214ENST00000574665 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
SLC12A4-214ENST00000574665 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
SLC12A4-214ENST00000574665 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
SLC12A4-214ENST00000574665 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
SLC12A4-214ENST00000574665 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
SLC12A4-214ENST00000574665 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
SLC12A4-214ENST00000574665 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
SLC12A4-214ENST00000574665 CUX2O14529 1486 aa22.99■■□□□ 1.27
SLC12A4-214ENST00000574665 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
SLC12A4-214ENST00000574665 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
SLC12A4-214ENST00000574665 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
SLC12A4-214ENST00000574665 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
SLC12A4-214ENST00000574665 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
SLC12A4-214ENST00000574665 NESP48681 1621 aa22.77■■□□□ 1.24
SLC12A4-214ENST00000574665 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
SLC12A4-214ENST00000574665 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
SLC12A4-214ENST00000574665 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
SLC12A4-214ENST00000574665 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
SLC12A4-214ENST00000574665 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
SLC12A4-214ENST00000574665 PDS5BQ9NTI5 1447 aa22.52■■□□□ 1.2
SLC12A4-214ENST00000574665 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.18
SLC12A4-214ENST00000574665 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.18
SLC12A4-214ENST00000574665 WIZO95785 1651 aa22.34■■□□□ 1.17
SLC12A4-214ENST00000574665 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
SLC12A4-214ENST00000574665 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
SLC12A4-214ENST00000574665 WDR62O43379 1518 aa22.21■■□□□ 1.15
SLC12A4-214ENST00000574665 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
SLC12A4-214ENST00000574665 CFTRP13569 1480 aa22.13■■□□□ 1.13
SLC12A4-214ENST00000574665 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
SLC12A4-214ENST00000574665 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
SLC12A4-214ENST00000574665 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
SLC12A4-214ENST00000574665 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
SLC12A4-214ENST00000574665 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
SLC12A4-214ENST00000574665 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
SLC12A4-214ENST00000574665 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
SLC12A4-214ENST00000574665 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
SLC12A4-214ENST00000574665 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.07
SLC12A4-214ENST00000574665 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
SLC12A4-214ENST00000574665 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
SLC12A4-214ENST00000574665 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
SLC12A4-214ENST00000574665 RIMBP3CA6NJZ7 1639 aa21.59■■□□□ 1.05
SLC12A4-214ENST00000574665 RIMBP3BA6NNM3 1639 aa21.59■■□□□ 1.05
SLC12A4-214ENST00000574665 RIMBP3Q9UFD9 1639 aa21.59■■□□□ 1.05
SLC12A4-214ENST00000574665 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
SLC12A4-214ENST00000574665 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
SLC12A4-214ENST00000574665 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.044e-9■■■■■ 45.7
SLC12A4-214ENST00000574665 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
SLC12A4-214ENST00000574665 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
SLC12A4-214ENST00000574665 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
SLC12A4-214ENST00000574665 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
SLC12A4-214ENST00000574665 FBLN2P98095 1184 aa21.44■■□□□ 1.02
SLC12A4-214ENST00000574665 SOGA1O94964 1423 aa21.41■■□□□ 1.02
SLC12A4-214ENST00000574665 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
SLC12A4-214ENST00000574665 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
SLC12A4-214ENST00000574665 CHD1O14646 1710 aa21.36■■□□□ 1.01
SLC12A4-214ENST00000574665 ARAP1Q96P48 1450 aa21.31■■□□□ 1
SLC12A4-214ENST00000574665 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
SLC12A4-214ENST00000574665 TRHP20396 242 aaPredicted RBP21.28■■□□□ 1
SLC12A4-214ENST00000574665 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
SLC12A4-214ENST00000574665 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
SLC12A4-214ENST00000574665 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
SLC12A4-214ENST00000574665 CUX1P39880 1505 aa21.23■□□□□ 0.99
SLC12A4-214ENST00000574665 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
SLC12A4-214ENST00000574665 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
SLC12A4-214ENST00000574665 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
SLC12A4-214ENST00000574665 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
SLC12A4-214ENST00000574665 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
SLC12A4-214ENST00000574665 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
SLC12A4-214ENST00000574665 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
SLC12A4-214ENST00000574665 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
SLC12A4-214ENST00000574665 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
SLC12A4-214ENST00000574665 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
SLC12A4-214ENST00000574665 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
SLC12A4-214ENST00000574665 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
SLC12A4-214ENST00000574665 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
SLC12A4-214ENST00000574665 NUP160Q12769 1436 aa20.87■□□□□ 0.93
SLC12A4-214ENST00000574665 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
SLC12A4-214ENST00000574665 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
SLC12A4-214ENST00000574665 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
SLC12A4-214ENST00000574665 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
SLC12A4-214ENST00000574665 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
SLC12A4-214ENST00000574665 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
SLC12A4-214ENST00000574665 SHROOM2Q13796 1616 aa20.76■□□□□ 0.91
SLC12A4-214ENST00000574665 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
SLC12A4-214ENST00000574665 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
SLC12A4-214ENST00000574665 KIF27Q86VH2 1401 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms