RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
FANCA-210ENST00000563318 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
FANCA-210ENST00000563318 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
FANCA-210ENST00000563318 AEBP2Q6ZN18 517 aaPredicted RBP26.53■■□□□ 1.84
FANCA-210ENST00000563318 ABCC9O60706 1549 aa26.33■■□□□ 1.81
FANCA-210ENST00000563318 NACADO15069 1562 aa25.35■■□□□ 1.65
FANCA-210ENST00000563318 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
FANCA-210ENST00000563318 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
FANCA-210ENST00000563318 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
FANCA-210ENST00000563318 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
FANCA-210ENST00000563318 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
FANCA-210ENST00000563318 UNC13AQ9UPW8 1703 aa24.8■■□□□ 1.56
FANCA-210ENST00000563318 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
FANCA-210ENST00000563318 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.521e-7■■■□□ 15.6
FANCA-210ENST00000563318 SCRIBQ14160 1630 aa24.52■■□□□ 1.52
FANCA-210ENST00000563318 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
FANCA-210ENST00000563318 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
FANCA-210ENST00000563318 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
FANCA-210ENST00000563318 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
FANCA-210ENST00000563318 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
FANCA-210ENST00000563318 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
FANCA-210ENST00000563318 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
FANCA-210ENST00000563318 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
FANCA-210ENST00000563318 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
FANCA-210ENST00000563318 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
FANCA-210ENST00000563318 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
FANCA-210ENST00000563318 MROH2BQ7Z745 1585 aa23.36■■□□□ 1.33
FANCA-210ENST00000563318 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
FANCA-210ENST00000563318 HMGXB3Q12766 1538 aa23.32■■□□□ 1.32
FANCA-210ENST00000563318 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
FANCA-210ENST00000563318 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
FANCA-210ENST00000563318 WIZO95785 1651 aa23.06■■□□□ 1.28
FANCA-210ENST00000563318 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
FANCA-210ENST00000563318 NESP48681 1621 aa22.82■■□□□ 1.24
FANCA-210ENST00000563318 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
FANCA-210ENST00000563318 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
FANCA-210ENST00000563318 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
FANCA-210ENST00000563318 CFTRP13569 1480 aa22.6■■□□□ 1.21
FANCA-210ENST00000563318 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
FANCA-210ENST00000563318 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
FANCA-210ENST00000563318 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
FANCA-210ENST00000563318 CUX2O14529 1486 aa22.53■■□□□ 1.2
FANCA-210ENST00000563318 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
FANCA-210ENST00000563318 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
FANCA-210ENST00000563318 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
FANCA-210ENST00000563318 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
FANCA-210ENST00000563318 WDR62O43379 1518 aa22.36■■□□□ 1.17
FANCA-210ENST00000563318 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
FANCA-210ENST00000563318 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
FANCA-210ENST00000563318 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
FANCA-210ENST00000563318 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
FANCA-210ENST00000563318 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
FANCA-210ENST00000563318 DNMBPQ6XZF7 1577 aa22.04■■□□□ 1.12
FANCA-210ENST00000563318 ABCC8Q09428 1581 aa22.04■■□□□ 1.12
FANCA-210ENST00000563318 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
FANCA-210ENST00000563318 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
FANCA-210ENST00000563318 CUX1P39880 1505 aa21.92■■□□□ 1.1
FANCA-210ENST00000563318 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
FANCA-210ENST00000563318 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
FANCA-210ENST00000563318 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
FANCA-210ENST00000563318 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
FANCA-210ENST00000563318 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
FANCA-210ENST00000563318 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
FANCA-210ENST00000563318 EIF4G3O43432 1585 aaKnown RBP21.75■■□□□ 1.07
FANCA-210ENST00000563318 SOGA1O94964 1423 aa21.73■■□□□ 1.07
FANCA-210ENST00000563318 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
FANCA-210ENST00000563318 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
FANCA-210ENST00000563318 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
FANCA-210ENST00000563318 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
FANCA-210ENST00000563318 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
FANCA-210ENST00000563318 AQRO60306 1485 aaKnown RBP eCLIP21.69■■□□□ 1.061e-6■■■■■ 31.5
FANCA-210ENST00000563318 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
FANCA-210ENST00000563318 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
FANCA-210ENST00000563318 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
FANCA-210ENST00000563318 GRIN2BQ13224 1484 aa21.52■■□□□ 1.03
FANCA-210ENST00000563318 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
FANCA-210ENST00000563318 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
FANCA-210ENST00000563318 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
FANCA-210ENST00000563318 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
FANCA-210ENST00000563318 PBRM1Q86U86 1689 aa21.45■■□□□ 1.02
FANCA-210ENST00000563318 CHD1O14646 1710 aa21.43■■□□□ 1.02
FANCA-210ENST00000563318 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
FANCA-210ENST00000563318 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
FANCA-210ENST00000563318 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
FANCA-210ENST00000563318 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
FANCA-210ENST00000563318 FHAD1B1AJZ9 1412 aa21.27■■□□□ 1
FANCA-210ENST00000563318 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
FANCA-210ENST00000563318 FBLN2P98095 1184 aa21.25■□□□□ 0.99
FANCA-210ENST00000563318 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
FANCA-210ENST00000563318 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
FANCA-210ENST00000563318 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
FANCA-210ENST00000563318 IGF1RP08069 1367 aa21.23■□□□□ 0.99
FANCA-210ENST00000563318 NUP160Q12769 1436 aa21.22■□□□□ 0.99
FANCA-210ENST00000563318 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
FANCA-210ENST00000563318 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
FANCA-210ENST00000563318 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
FANCA-210ENST00000563318 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
FANCA-210ENST00000563318 CUL7Q14999 1698 aa21.12■□□□□ 0.97
FANCA-210ENST00000563318 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
FANCA-210ENST00000563318 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms