RNA–Protein interactions for RNA: ENST00000568503.1

NOL3-213, Transcript of nucleolar protein 3, humanhuman

TSL 5

Gene NOL3, Length 1,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOL3-213ENST00000568503 NISCHQ9Y2I1 1504 aa54.94■■■■■ 6.39
NOL3-213ENST00000568503 CCDC180Q9P1Z9 1646 aa48.14■■■■■ 5.3
NOL3-213ENST00000568503 ZCCHC6Q5VYS8 1495 aaKnown RBP46.09■■■■■ 4.97
NOL3-213ENST00000568503 ABCC9O60706 1549 aa45.61■■■■■ 4.89
NOL3-213ENST00000568503 DCAF1Q9Y4B6 1507 aa45.53■■■■■ 4.88
NOL3-213ENST00000568503 DCAF8L2P0C7V8 631 aa45.35■■■■■ 4.85
NOL3-213ENST00000568503 MYO15BQ96JP2 1530 aa45.13■■■■■ 4.81
NOL3-213ENST00000568503 NACADO15069 1562 aa44.89■■■■■ 4.78
NOL3-213ENST00000568503 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
NOL3-213ENST00000568503 SHROOM4Q9ULL8 1493 aa44.44■■■■■ 4.7
NOL3-213ENST00000568503 SCRIBQ14160 1630 aa44.08■■■■■ 4.65
NOL3-213ENST00000568503 UNC13AQ9UPW8 1703 aa43.54■■■■■ 4.56
NOL3-213ENST00000568503 BICRAQ9NZM4 1560 aa43.12■■■■■ 4.49
NOL3-213ENST00000568503 PABPN1Q86U42 306 aaKnown RBP eCLIP42.92■■■■■ 4.461e-6■■■□□ 15.5
NOL3-213ENST00000568503 SUPT5HO00267 1087 aaKnown RBP42.66■■■■■ 4.42
NOL3-213ENST00000568503 CECR2Q9BXF3 1484 aa42.61■■■■■ 4.41
NOL3-213ENST00000568503 BAZ1AQ9NRL2 1556 aaPredicted RBP42.49■■■■■ 4.39
NOL3-213ENST00000568503 RSF1Q96T23 1441 aaPredicted RBP42.47■■■■■ 4.39
NOL3-213ENST00000568503 MROH2BQ7Z745 1585 aa42.37■■■■■ 4.37
NOL3-213ENST00000568503 SMARCA4P51532 1647 aa42.29■■■■■ 4.36
NOL3-213ENST00000568503 WIZO95785 1651 aa42■■■■■ 4.31
NOL3-213ENST00000568503 EIF4G1Q04637 1599 aaKnown RBP41.88■■■■■ 4.3
NOL3-213ENST00000568503 PEG3Q9GZU2 1588 aa41.84■■■■■ 4.29
NOL3-213ENST00000568503 SMARCA2P51531 1590 aa41.71■■■■■ 4.27
NOL3-213ENST00000568503 ATAD2BQ9ULI0 1458 aa41.66■■■■■ 4.26
NOL3-213ENST00000568503 TOP2AP11388 1531 aaKnown RBP41.65■■■■■ 4.26
NOL3-213ENST00000568503 BAZ1BQ9UIG0 1483 aaKnown RBP41.44■■■■■ 4.22
NOL3-213ENST00000568503 NCAPD3P42695 1498 aa41.4■■■■■ 4.22
NOL3-213ENST00000568503 HMGXB3Q12766 1538 aa41.34■■■■■ 4.21
NOL3-213ENST00000568503 CC2D2AQ9P2K1 1620 aa41.31■■■■■ 4.2
NOL3-213ENST00000568503 CCDC88BA6NC98 1476 aa41.16■■■■■ 4.18
NOL3-213ENST00000568503 CHIC1Q5VXU3 224 aa40.72■■■■■ 4.11
NOL3-213ENST00000568503 DNAJC5BQ9UF47 199 aa40.39■■■■■ 4.06
NOL3-213ENST00000568503 CFTRP13569 1480 aa40.38■■■■■ 4.05
NOL3-213ENST00000568503 CADPSQ9ULU8 1353 aa40.3■■■■■ 4.04
NOL3-213ENST00000568503 TRIM41Q8WV44 630 aa40.22■■■■■ 4.03
NOL3-213ENST00000568503 PRDM2Q13029 1718 aa40.19■■■■■ 4.02
NOL3-213ENST00000568503 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
NOL3-213ENST00000568503 LAMC3Q9Y6N6 1575 aa40.06■■■■■ 4
NOL3-213ENST00000568503 WRNQ14191 1432 aaPredicted RBP eCLIP40.02■■■■■ 4
NOL3-213ENST00000568503 NESP48681 1621 aa39.92■■■■□ 3.98
NOL3-213ENST00000568503 FANCD2Q9BXW9 1451 aa39.84■■■■□ 3.97
NOL3-213ENST00000568503 SYNJ1O43426 1573 aa39.81■■■■□ 3.96
NOL3-213ENST00000568503 PDS5BQ9NTI5 1447 aa39.77■■■■□ 3.96
NOL3-213ENST00000568503 TOP2BQ02880 1626 aa39.75■■■■□ 3.95
NOL3-213ENST00000568503 BIVM-ERCC5R4GMW8 1640 aa39.71■■■■□ 3.95
NOL3-213ENST00000568503 CUX1P39880 1505 aa39.65■■■■□ 3.94
NOL3-213ENST00000568503 CEP164Q9UPV0 1460 aa39.64■■■■□ 3.94
NOL3-213ENST00000568503 KIF21AQ7Z4S6 1674 aa39.5■■■■□ 3.91
NOL3-213ENST00000568503 DNMBPQ6XZF7 1577 aa39.46■■■■□ 3.91
NOL3-213ENST00000568503 EEA1Q15075 1411 aa39.39■■■■□ 3.9
NOL3-213ENST00000568503 TOPBP1Q92547 1522 aa39.37■■■■□ 3.89
NOL3-213ENST00000568503 FAM9AQ8IZU1 332 aaPredicted RBP39.35■■■■□ 3.89
NOL3-213ENST00000568503 SOGA1O94964 1423 aa39.33■■■■□ 3.89
NOL3-213ENST00000568503 URB2Q14146 1524 aaKnown RBP39.32■■■■□ 3.88
NOL3-213ENST00000568503 FGD5Q6ZNL6 1462 aa39.29■■■■□ 3.88
NOL3-213ENST00000568503 MRC2Q9UBG0 1479 aa39.24■■■■□ 3.87
NOL3-213ENST00000568503 ERCC6Q03468 1493 aa39.22■■■■□ 3.87
NOL3-213ENST00000568503 RUSC2Q8N2Y8 1516 aa39.17■■■■□ 3.86
NOL3-213ENST00000568503 POLA1P09884 1462 aaPredicted RBP39.14■■■■□ 3.86
NOL3-213ENST00000568503 CSRNP3Q8WYN3 585 aa39.1■■■■□ 3.85
NOL3-213ENST00000568503 KIF27Q86VH2 1401 aa39.07■■■■□ 3.85
NOL3-213ENST00000568503 LOC105371045A0A1W2PR82 267 aa39.06■■■■□ 3.84
NOL3-213ENST00000568503 WDR62O43379 1518 aa39.05■■■■□ 3.84
NOL3-213ENST00000568503 ABCA10Q8WWZ4 1543 aa38.98■■■■□ 3.83
NOL3-213ENST00000568503 CUX2O14529 1486 aa38.98■■■■□ 3.83
NOL3-213ENST00000568503 RAD54L2Q9Y4B4 1467 aa38.95■■■■□ 3.83
NOL3-213ENST00000568503 THOC2Q8NI27 1593 aaKnown RBP38.95■■■■□ 3.83
NOL3-213ENST00000568503 WDR97A6NE52 1622 aa38.85■■■■□ 3.81
NOL3-213ENST00000568503 KIF21BO75037 1637 aa38.83■■■■□ 3.81
NOL3-213ENST00000568503 TARBP1Q13395 1621 aaKnown RBP38.8■■■■□ 3.8
NOL3-213ENST00000568503 GOLGA3Q08378 1498 aa38.77■■■■□ 3.8
NOL3-213ENST00000568503 IFT140Q96RY7 1462 aa38.74■■■■□ 3.79
NOL3-213ENST00000568503 EHMT2Q96KQ7 1210 aa38.73■■■■□ 3.79
NOL3-213ENST00000568503 PRXQ9BXM0 1461 aa38.69■■■■□ 3.78
NOL3-213ENST00000568503 IGF1RP08069 1367 aa38.69■■■■□ 3.78
NOL3-213ENST00000568503 ABCA5Q8WWZ7 1642 aa38.66■■■■□ 3.78
NOL3-213ENST00000568503 ERICH3Q5RHP9 1530 aa38.65■■■■□ 3.78
NOL3-213ENST00000568503 TDRD9Q8NDG6 1382 aaKnown RBP38.62■■■■□ 3.77
NOL3-213ENST00000568503 GAPVD1Q14C86 1478 aa38.61■■■■□ 3.77
NOL3-213ENST00000568503 RAPGEF2Q9Y4G8 1499 aa38.58■■■■□ 3.77
NOL3-213ENST00000568503 TNIKQ9UKE5 1360 aa38.58■■■■□ 3.77
NOL3-213ENST00000568503 UBTFP17480 764 aaKnown RBP38.55■■■■□ 3.76
NOL3-213ENST00000568503 CARMIL1Q5VZK9 1371 aa38.52■■■■□ 3.76
NOL3-213ENST00000568503 CUL7Q14999 1698 aa38.51■■■■□ 3.76
NOL3-213ENST00000568503 AQRO60306 1485 aaKnown RBP eCLIP38.42■■■■□ 3.74
NOL3-213ENST00000568503 ZNF608Q9ULD9 1512 aaPredicted RBP38.41■■■■□ 3.74
NOL3-213ENST00000568503 PBRM1Q86U86 1689 aa38.4■■■■□ 3.74
NOL3-213ENST00000568503 GRIN2BQ13224 1484 aa38.38■■■■□ 3.73
NOL3-213ENST00000568503 EIF4G3O43432 1585 aaKnown RBP38.33■■■■□ 3.73
NOL3-213ENST00000568503 CEP162Q5TB80 1403 aa38.3■■■■□ 3.72
NOL3-213ENST00000568503 FHAD1B1AJZ9 1412 aa38.22■■■■□ 3.71
NOL3-213ENST00000568503 ADAMTS12P58397 1594 aa38.19■■■■□ 3.7
NOL3-213ENST00000568503 MAGI1Q96QZ7 1491 aaPredicted RBP38.11■■■■□ 3.69
NOL3-213ENST00000568503 CLIP1P30622 1438 aa38.11■■■■□ 3.69
NOL3-213ENST00000568503 SNAPC4Q5SXM2 1469 aa38.1■■■■□ 3.69
NOL3-213ENST00000568503 CTTNBP2Q8WZ74 1663 aa37.99■■■■□ 3.67
NOL3-213ENST00000568503 SYNJ2O15056 1496 aa37.94■■■■□ 3.66
NOL3-213ENST00000568503 RANGAP1P46060 587 aaPredicted RBP37.89■■■■□ 3.66
NOL3-213ENST00000568503 GRIN2AQ12879 1464 aa37.88■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms