RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
SYMPK-207ENST00000596824 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
SYMPK-207ENST00000596824 ABCC9O60706 1549 aa25.53■■□□□ 1.68
SYMPK-207ENST00000596824 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
SYMPK-207ENST00000596824 NACADO15069 1562 aa24.42■■□□□ 1.5
SYMPK-207ENST00000596824 MYO15BQ96JP2 1530 aa24.19■■□□□ 1.46
SYMPK-207ENST00000596824 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
SYMPK-207ENST00000596824 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
SYMPK-207ENST00000596824 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
SYMPK-207ENST00000596824 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
SYMPK-207ENST00000596824 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
SYMPK-207ENST00000596824 PABPN1Q86U42 306 aaKnown RBP eCLIP23.72■■□□□ 1.391e-6■■■□□ 15.6
SYMPK-207ENST00000596824 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
SYMPK-207ENST00000596824 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
SYMPK-207ENST00000596824 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
SYMPK-207ENST00000596824 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
SYMPK-207ENST00000596824 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
SYMPK-207ENST00000596824 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
SYMPK-207ENST00000596824 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
SYMPK-207ENST00000596824 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
SYMPK-207ENST00000596824 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
SYMPK-207ENST00000596824 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
SYMPK-207ENST00000596824 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
SYMPK-207ENST00000596824 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
SYMPK-207ENST00000596824 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
SYMPK-207ENST00000596824 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
SYMPK-207ENST00000596824 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
SYMPK-207ENST00000596824 WIZO95785 1651 aa22.17■■□□□ 1.14
SYMPK-207ENST00000596824 NESP48681 1621 aa22.06■■□□□ 1.12
SYMPK-207ENST00000596824 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
SYMPK-207ENST00000596824 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
SYMPK-207ENST00000596824 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
SYMPK-207ENST00000596824 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
SYMPK-207ENST00000596824 CUX2O14529 1486 aa21.9■■□□□ 1.1
SYMPK-207ENST00000596824 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
SYMPK-207ENST00000596824 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
SYMPK-207ENST00000596824 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
SYMPK-207ENST00000596824 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
SYMPK-207ENST00000596824 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
SYMPK-207ENST00000596824 CFTRP13569 1480 aa21.64■■□□□ 1.05
SYMPK-207ENST00000596824 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
SYMPK-207ENST00000596824 WDR62O43379 1518 aa21.6■■□□□ 1.05
SYMPK-207ENST00000596824 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
SYMPK-207ENST00000596824 FANCD2Q9BXW9 1451 aa21.57■■□□□ 1.04
SYMPK-207ENST00000596824 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
SYMPK-207ENST00000596824 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
SYMPK-207ENST00000596824 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
SYMPK-207ENST00000596824 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
SYMPK-207ENST00000596824 DNMBPQ6XZF7 1577 aa21.22■□□□□ 0.99
SYMPK-207ENST00000596824 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
SYMPK-207ENST00000596824 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
SYMPK-207ENST00000596824 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
SYMPK-207ENST00000596824 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
SYMPK-207ENST00000596824 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
SYMPK-207ENST00000596824 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
SYMPK-207ENST00000596824 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
SYMPK-207ENST00000596824 CUX1P39880 1505 aa20.99■□□□□ 0.95
SYMPK-207ENST00000596824 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
SYMPK-207ENST00000596824 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
SYMPK-207ENST00000596824 CHD1O14646 1710 aa20.93■□□□□ 0.94
SYMPK-207ENST00000596824 RAD54L2Q9Y4B4 1467 aa20.91■□□□□ 0.94
SYMPK-207ENST00000596824 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.938e-7■■■■■ 28.7
SYMPK-207ENST00000596824 SOGA1O94964 1423 aa20.87■□□□□ 0.93
SYMPK-207ENST00000596824 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
SYMPK-207ENST00000596824 OSCARQ8IYS5 282 aa20.83■□□□□ 0.93
SYMPK-207ENST00000596824 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
SYMPK-207ENST00000596824 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
SYMPK-207ENST00000596824 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
SYMPK-207ENST00000596824 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
SYMPK-207ENST00000596824 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
SYMPK-207ENST00000596824 RIMBP3CA6NJZ7 1639 aa20.73■□□□□ 0.91
SYMPK-207ENST00000596824 RIMBP3BA6NNM3 1639 aa20.73■□□□□ 0.91
SYMPK-207ENST00000596824 RIMBP3Q9UFD9 1639 aa20.73■□□□□ 0.91
SYMPK-207ENST00000596824 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
SYMPK-207ENST00000596824 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
SYMPK-207ENST00000596824 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
SYMPK-207ENST00000596824 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
SYMPK-207ENST00000596824 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
SYMPK-207ENST00000596824 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
SYMPK-207ENST00000596824 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
SYMPK-207ENST00000596824 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
SYMPK-207ENST00000596824 CLASP1Q7Z460 1538 aa20.59■□□□□ 0.89
SYMPK-207ENST00000596824 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
SYMPK-207ENST00000596824 FBLN2P98095 1184 aa20.58■□□□□ 0.89
SYMPK-207ENST00000596824 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
SYMPK-207ENST00000596824 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
SYMPK-207ENST00000596824 ERICH3Q5RHP9 1530 aa20.49■□□□□ 0.87
SYMPK-207ENST00000596824 GRIN2AQ12879 1464 aa20.44■□□□□ 0.86
SYMPK-207ENST00000596824 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
SYMPK-207ENST00000596824 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
SYMPK-207ENST00000596824 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.85
SYMPK-207ENST00000596824 NUP160Q12769 1436 aa20.36■□□□□ 0.85
SYMPK-207ENST00000596824 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
SYMPK-207ENST00000596824 CUL7Q14999 1698 aa20.33■□□□□ 0.85
SYMPK-207ENST00000596824 CYB5RLQ6IPT4 315 aa20.31■□□□□ 0.84
SYMPK-207ENST00000596824 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
SYMPK-207ENST00000596824 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
SYMPK-207ENST00000596824 KIF27Q86VH2 1401 aa20.27■□□□□ 0.83
SYMPK-207ENST00000596824 IGF1RP08069 1367 aa20.2■□□□□ 0.82
SYMPK-207ENST00000596824 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms