RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
LTBP3-221ENST00000532932 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
LTBP3-221ENST00000532932 SUPT5HO00267 1087 aaKnown RBP25.25■■□□□ 1.63
LTBP3-221ENST00000532932 HRCP23327 699 aa24.75■■□□□ 1.55
LTBP3-221ENST00000532932 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
LTBP3-221ENST00000532932 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
LTBP3-221ENST00000532932 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
LTBP3-221ENST00000532932 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
LTBP3-221ENST00000532932 PPARGC1BQ86YN6 1023 aaKnown RBP24.42■■□□□ 1.5
LTBP3-221ENST00000532932 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
LTBP3-221ENST00000532932 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
LTBP3-221ENST00000532932 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
LTBP3-221ENST00000532932 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
LTBP3-221ENST00000532932 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
LTBP3-221ENST00000532932 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
LTBP3-221ENST00000532932 FAM9AQ8IZU1 332 aaPredicted RBP23.42■■□□□ 1.34
LTBP3-221ENST00000532932 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
LTBP3-221ENST00000532932 ABCC9O60706 1549 aa23.4■■□□□ 1.34
LTBP3-221ENST00000532932 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
LTBP3-221ENST00000532932 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
LTBP3-221ENST00000532932 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
LTBP3-221ENST00000532932 RSF1Q96T23 1441 aaPredicted RBP22.94■■□□□ 1.26
LTBP3-221ENST00000532932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.92■■□□□ 1.26
LTBP3-221ENST00000532932 CCER1Q8TC90 406 aaPredicted RBP22.88■■□□□ 1.25
LTBP3-221ENST00000532932 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
LTBP3-221ENST00000532932 NEUROD1Q13562 356 aa22.8■■□□□ 1.24
LTBP3-221ENST00000532932 ACIN1Q9UKV3 1341 aaKnown RBP22.8■■□□□ 1.24
LTBP3-221ENST00000532932 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
LTBP3-221ENST00000532932 RB1CC1Q8TDY2 1594 aa22.78■■□□□ 1.24
LTBP3-221ENST00000532932 GTF3C3Q9Y5Q9 886 aa22.68■■□□□ 1.22
LTBP3-221ENST00000532932 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
LTBP3-221ENST00000532932 CENPBP07199 599 aaPredicted RBP22.63■■□□□ 1.21
LTBP3-221ENST00000532932 PABPN1Q86U42 306 aaKnown RBP eCLIP22.48■■□□□ 1.191e-7■■■□□ 15.7
LTBP3-221ENST00000532932 NACADO15069 1562 aa22.46■■□□□ 1.19
LTBP3-221ENST00000532932 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
LTBP3-221ENST00000532932 YTHDC1Q96MU7 727 aaKnown RBP22.44■■□□□ 1.18
LTBP3-221ENST00000532932 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
LTBP3-221ENST00000532932 ZNF316A6NFI3 1004 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-221ENST00000532932 WIZO95785 1651 aa22.24■■□□□ 1.15
LTBP3-221ENST00000532932 MYT1Q01538 1121 aa22.23■■□□□ 1.15
LTBP3-221ENST00000532932 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
LTBP3-221ENST00000532932 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
LTBP3-221ENST00000532932 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.13
LTBP3-221ENST00000532932 MIER1Q8N108 512 aa22.12■■□□□ 1.13
LTBP3-221ENST00000532932 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
LTBP3-221ENST00000532932 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
LTBP3-221ENST00000532932 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
LTBP3-221ENST00000532932 SOGA1O94964 1423 aa22.04■■□□□ 1.12
LTBP3-221ENST00000532932 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
LTBP3-221ENST00000532932 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
LTBP3-221ENST00000532932 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
LTBP3-221ENST00000532932 RANGAP1P46060 587 aaPredicted RBP21.93■■□□□ 1.1
LTBP3-221ENST00000532932 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
LTBP3-221ENST00000532932 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
LTBP3-221ENST00000532932 APLP2Q06481 763 aa21.83■■□□□ 1.09
LTBP3-221ENST00000532932 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
LTBP3-221ENST00000532932 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
LTBP3-221ENST00000532932 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
LTBP3-221ENST00000532932 EEA1Q15075 1411 aa21.74■■□□□ 1.07
LTBP3-221ENST00000532932 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
LTBP3-221ENST00000532932 CLIP1P30622 1438 aa21.66■■□□□ 1.06
LTBP3-221ENST00000532932 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
LTBP3-221ENST00000532932 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
LTBP3-221ENST00000532932 SUPT16HQ9Y5B9 1047 aaKnown RBP21.59■■□□□ 1.05
LTBP3-221ENST00000532932 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
LTBP3-221ENST00000532932 VPS8Q8N3P4 1428 aa21.53■■□□□ 1.04
LTBP3-221ENST00000532932 ITGAEP38570 1179 aa21.44■■□□□ 1.02
LTBP3-221ENST00000532932 BCANQ96GW7 911 aa21.42■■□□□ 1.02
LTBP3-221ENST00000532932 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
LTBP3-221ENST00000532932 DHX57Q6P158 1386 aaKnown RBP21.41■■□□□ 1.02
LTBP3-221ENST00000532932 TSHZ2Q9NRE2 1034 aa21.4■■□□□ 1.02
LTBP3-221ENST00000532932 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
LTBP3-221ENST00000532932 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
LTBP3-221ENST00000532932 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
LTBP3-221ENST00000532932 KCNH8Q96L42 1107 aa21.35■■□□□ 1.01
LTBP3-221ENST00000532932 KIF21BO75037 1637 aa21.34■■□□□ 1.01
LTBP3-221ENST00000532932 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
LTBP3-221ENST00000532932 ANP32EQ9BTT0 268 aa21.27■■□□□ 1
LTBP3-221ENST00000532932 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
LTBP3-221ENST00000532932 FKBP8Q14318 412 aa21.22■□□□□ 0.99
LTBP3-221ENST00000532932 DDX10Q13206 875 aaKnown RBP21.17■□□□□ 0.98
LTBP3-221ENST00000532932 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
LTBP3-221ENST00000532932 NEFLP07196 543 aa21.09■□□□□ 0.97
LTBP3-221ENST00000532932 CCNB3Q8WWL7 1395 aa21.09■□□□□ 0.97
LTBP3-221ENST00000532932 HIRIP3Q9BW71 556 aaPredicted RBP21.09■□□□□ 0.97
LTBP3-221ENST00000532932 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
LTBP3-221ENST00000532932 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
LTBP3-221ENST00000532932 RRBP1Q9P2E9 1410 aaKnown RBP21.02■□□□□ 0.96
LTBP3-221ENST00000532932 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
LTBP3-221ENST00000532932 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
LTBP3-221ENST00000532932 FAM50AQ14320 339 aaKnown RBP21■□□□□ 0.95
LTBP3-221ENST00000532932 ATP1B4Q9UN42 357 aaPredicted RBP20.97■□□□□ 0.95
LTBP3-221ENST00000532932 RBM19Q9Y4C8 960 aaKnown RBP20.96■□□□□ 0.95
LTBP3-221ENST00000532932 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
LTBP3-221ENST00000532932 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
LTBP3-221ENST00000532932 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
LTBP3-221ENST00000532932 ANP32CO43423 234 aa20.91■□□□□ 0.94
LTBP3-221ENST00000532932 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
LTBP3-221ENST00000532932 CUX2O14529 1486 aa20.87■□□□□ 0.93
LTBP3-221ENST00000532932 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms