RNA–Protein interactions for RNA: ENST00000579298.5

NUP85-210, Transcript of nucleoporin 85, humanhuman

TSL 5 BASIC

Gene NUP85, Length 1,890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-210ENST00000579298 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
NUP85-210ENST00000579298 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
NUP85-210ENST00000579298 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
NUP85-210ENST00000579298 SHROOM4Q9ULL8 1493 aa17.87■□□□□ 0.45
NUP85-210ENST00000579298 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
NUP85-210ENST00000579298 ABCC9O60706 1549 aa17.65■□□□□ 0.42
NUP85-210ENST00000579298 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.41
NUP85-210ENST00000579298 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
NUP85-210ENST00000579298 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
NUP85-210ENST00000579298 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
NUP85-210ENST00000579298 HRCP23327 699 aa17.07■□□□□ 0.32
NUP85-210ENST00000579298 NACADO15069 1562 aa17.02■□□□□ 0.32
NUP85-210ENST00000579298 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
NUP85-210ENST00000579298 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
NUP85-210ENST00000579298 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
NUP85-210ENST00000579298 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
NUP85-210ENST00000579298 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
NUP85-210ENST00000579298 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
NUP85-210ENST00000579298 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
NUP85-210ENST00000579298 MROH2BQ7Z745 1585 aa16.54■□□□□ 0.24
NUP85-210ENST00000579298 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
NUP85-210ENST00000579298 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.246e-11■■■□□ 15.6
NUP85-210ENST00000579298 BICRAQ9NZM4 1560 aa16.52■□□□□ 0.24
NUP85-210ENST00000579298 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
NUP85-210ENST00000579298 EIF4G1Q04637 1599 aaKnown RBP16.48■□□□□ 0.23
NUP85-210ENST00000579298 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
NUP85-210ENST00000579298 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
NUP85-210ENST00000579298 WIZO95785 1651 aa16.43■□□□□ 0.22
NUP85-210ENST00000579298 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
NUP85-210ENST00000579298 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
NUP85-210ENST00000579298 SMARCA4P51532 1647 aa16.24■□□□□ 0.19
NUP85-210ENST00000579298 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
NUP85-210ENST00000579298 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
NUP85-210ENST00000579298 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
NUP85-210ENST00000579298 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
NUP85-210ENST00000579298 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
NUP85-210ENST00000579298 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
NUP85-210ENST00000579298 EEA1Q15075 1411 aa16.06■□□□□ 0.16
NUP85-210ENST00000579298 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
NUP85-210ENST00000579298 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
NUP85-210ENST00000579298 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
NUP85-210ENST00000579298 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
NUP85-210ENST00000579298 SOGA1O94964 1423 aa15.93■□□□□ 0.14
NUP85-210ENST00000579298 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
NUP85-210ENST00000579298 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
NUP85-210ENST00000579298 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
NUP85-210ENST00000579298 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
NUP85-210ENST00000579298 KIF21BO75037 1637 aa15.84■□□□□ 0.13
NUP85-210ENST00000579298 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
NUP85-210ENST00000579298 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.12
NUP85-210ENST00000579298 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
NUP85-210ENST00000579298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
NUP85-210ENST00000579298 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
NUP85-210ENST00000579298 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
NUP85-210ENST00000579298 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
NUP85-210ENST00000579298 NCAPD3P42695 1498 aa15.71■□□□□ 0.1
NUP85-210ENST00000579298 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
NUP85-210ENST00000579298 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
NUP85-210ENST00000579298 HMGXB3Q12766 1538 aa15.64■□□□□ 0.09
NUP85-210ENST00000579298 BIVM-ERCC5R4GMW8 1640 aa15.63■□□□□ 0.09
NUP85-210ENST00000579298 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
NUP85-210ENST00000579298 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
NUP85-210ENST00000579298 CLIP1P30622 1438 aa15.61■□□□□ 0.09
NUP85-210ENST00000579298 ACIN1Q9UKV3 1341 aaKnown RBP15.58■□□□□ 0.08
NUP85-210ENST00000579298 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
NUP85-210ENST00000579298 RAPGEF2Q9Y4G8 1499 aa15.56■□□□□ 0.08
NUP85-210ENST00000579298 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
NUP85-210ENST00000579298 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
NUP85-210ENST00000579298 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
NUP85-210ENST00000579298 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
NUP85-210ENST00000579298 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
NUP85-210ENST00000579298 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
NUP85-210ENST00000579298 TTBK1Q5TCY1 1321 aaPredicted RBP15.42■□□□□ 0.06
NUP85-210ENST00000579298 CUX1P39880 1505 aa15.41■□□□□ 0.06
NUP85-210ENST00000579298 CLSPNQ9HAW4 1339 aa15.41■□□□□ 0.06
NUP85-210ENST00000579298 CFTRP13569 1480 aa15.39■□□□□ 0.05
NUP85-210ENST00000579298 CUX2O14529 1486 aa15.37■□□□□ 0.05
NUP85-210ENST00000579298 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
NUP85-210ENST00000579298 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
NUP85-210ENST00000579298 NESP48681 1621 aa15.33■□□□□ 0.05
NUP85-210ENST00000579298 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
NUP85-210ENST00000579298 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
NUP85-210ENST00000579298 APLP2Q06481 763 aa15.31■□□□□ 0.04
NUP85-210ENST00000579298 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
NUP85-210ENST00000579298 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
NUP85-210ENST00000579298 MAP3K1Q13233 1512 aa15.28■□□□□ 0.04
NUP85-210ENST00000579298 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.03
NUP85-210ENST00000579298 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
NUP85-210ENST00000579298 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
NUP85-210ENST00000579298 MIER1Q8N108 512 aa15.21■□□□□ 0.03
NUP85-210ENST00000579298 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
NUP85-210ENST00000579298 IGF1RP08069 1367 aa15.17■□□□□ 0.02
NUP85-210ENST00000579298 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
NUP85-210ENST00000579298 CCNB3Q8WWL7 1395 aa15.15■□□□□ 0.02
NUP85-210ENST00000579298 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
NUP85-210ENST00000579298 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
NUP85-210ENST00000579298 TIAM1Q13009 1591 aa15.14■□□□□ 0.01
NUP85-210ENST00000579298 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
NUP85-210ENST00000579298 CFAP43Q8NDM7 1665 aa15.08■□□□□ 0
NUP85-210ENST00000579298 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms