RNA–Protein interactions for RNA: ENST00000573702.1

SLC12A4-213, Transcript of solute carrier family 12 member 4, humanhuman

TSL 4

Gene SLC12A4, Length 633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-213ENST00000573702 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
SLC12A4-213ENST00000573702 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
SLC12A4-213ENST00000573702 ABCC9O60706 1549 aa31.2■■■□□ 2.59
SLC12A4-213ENST00000573702 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
SLC12A4-213ENST00000573702 RB1CC1Q8TDY2 1594 aa29.75■■■□□ 2.35
SLC12A4-213ENST00000573702 NACADO15069 1562 aa29.6■■■□□ 2.33
SLC12A4-213ENST00000573702 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
SLC12A4-213ENST00000573702 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
SLC12A4-213ENST00000573702 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.263e-6■■■□□ 15.6
SLC12A4-213ENST00000573702 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.26
SLC12A4-213ENST00000573702 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
SLC12A4-213ENST00000573702 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
SLC12A4-213ENST00000573702 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
SLC12A4-213ENST00000573702 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
SLC12A4-213ENST00000573702 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
SLC12A4-213ENST00000573702 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
SLC12A4-213ENST00000573702 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
SLC12A4-213ENST00000573702 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
SLC12A4-213ENST00000573702 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
SLC12A4-213ENST00000573702 ATAD2BQ9ULI0 1458 aa27.33■■□□□ 1.97
SLC12A4-213ENST00000573702 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
SLC12A4-213ENST00000573702 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
SLC12A4-213ENST00000573702 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
SLC12A4-213ENST00000573702 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
SLC12A4-213ENST00000573702 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
SLC12A4-213ENST00000573702 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
SLC12A4-213ENST00000573702 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
SLC12A4-213ENST00000573702 WIZO95785 1651 aa26.92■■□□□ 1.9
SLC12A4-213ENST00000573702 NESP48681 1621 aa26.9■■□□□ 1.9
SLC12A4-213ENST00000573702 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
SLC12A4-213ENST00000573702 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
SLC12A4-213ENST00000573702 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
SLC12A4-213ENST00000573702 CUX2O14529 1486 aa26.61■■□□□ 1.85
SLC12A4-213ENST00000573702 KIF21AQ7Z4S6 1674 aa26.56■■□□□ 1.84
SLC12A4-213ENST00000573702 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
SLC12A4-213ENST00000573702 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
SLC12A4-213ENST00000573702 PDS5BQ9NTI5 1447 aa26.51■■□□□ 1.83
SLC12A4-213ENST00000573702 THOC2Q8NI27 1593 aaKnown RBP26.47■■□□□ 1.83
SLC12A4-213ENST00000573702 CFTRP13569 1480 aa26.3■■□□□ 1.8
SLC12A4-213ENST00000573702 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
SLC12A4-213ENST00000573702 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
SLC12A4-213ENST00000573702 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
SLC12A4-213ENST00000573702 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
SLC12A4-213ENST00000573702 DNAJC5Q9H3Z4 198 aa26.24■■□□□ 1.79
SLC12A4-213ENST00000573702 WDR62O43379 1518 aa26.18■■□□□ 1.78
SLC12A4-213ENST00000573702 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
SLC12A4-213ENST00000573702 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
SLC12A4-213ENST00000573702 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
SLC12A4-213ENST00000573702 TOPBP1Q92547 1522 aa25.82■■□□□ 1.72
SLC12A4-213ENST00000573702 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
SLC12A4-213ENST00000573702 ABCC8Q09428 1581 aa25.72■■□□□ 1.71
SLC12A4-213ENST00000573702 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
SLC12A4-213ENST00000573702 ZNF608Q9ULD9 1512 aaPredicted RBP25.69■■□□□ 1.7
SLC12A4-213ENST00000573702 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
SLC12A4-213ENST00000573702 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
SLC12A4-213ENST00000573702 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
SLC12A4-213ENST00000573702 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
SLC12A4-213ENST00000573702 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
SLC12A4-213ENST00000573702 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.683e-12■■■■■ 53.8
SLC12A4-213ENST00000573702 CUX1P39880 1505 aa25.52■■□□□ 1.68
SLC12A4-213ENST00000573702 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
SLC12A4-213ENST00000573702 SOGA1O94964 1423 aa25.49■■□□□ 1.67
SLC12A4-213ENST00000573702 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
SLC12A4-213ENST00000573702 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
SLC12A4-213ENST00000573702 FBLN2P98095 1184 aa25.37■■□□□ 1.65
SLC12A4-213ENST00000573702 CHD1O14646 1710 aa25.33■■□□□ 1.65
SLC12A4-213ENST00000573702 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
SLC12A4-213ENST00000573702 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
SLC12A4-213ENST00000573702 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
SLC12A4-213ENST00000573702 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
SLC12A4-213ENST00000573702 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
SLC12A4-213ENST00000573702 RIMBP3CA6NJZ7 1639 aa25.18■■□□□ 1.62
SLC12A4-213ENST00000573702 RIMBP3BA6NNM3 1639 aa25.18■■□□□ 1.62
SLC12A4-213ENST00000573702 RIMBP3Q9UFD9 1639 aa25.18■■□□□ 1.62
SLC12A4-213ENST00000573702 BIVM-ERCC5R4GMW8 1640 aa25.18■■□□□ 1.62
SLC12A4-213ENST00000573702 GAPVD1Q14C86 1478 aa25.17■■□□□ 1.62
SLC12A4-213ENST00000573702 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
SLC12A4-213ENST00000573702 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
SLC12A4-213ENST00000573702 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
SLC12A4-213ENST00000573702 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
SLC12A4-213ENST00000573702 MAGI1Q96QZ7 1491 aaPredicted RBP25.12■■□□□ 1.61
SLC12A4-213ENST00000573702 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
SLC12A4-213ENST00000573702 ARHGEF11O15085 1522 aa25.11■■□□□ 1.61
SLC12A4-213ENST00000573702 SYNJ2O15056 1496 aa25.06■■□□□ 1.6
SLC12A4-213ENST00000573702 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
SLC12A4-213ENST00000573702 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
SLC12A4-213ENST00000573702 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
SLC12A4-213ENST00000573702 ARAP1Q96P48 1450 aa24.89■■□□□ 1.57
SLC12A4-213ENST00000573702 GRIN2AQ12879 1464 aa24.88■■□□□ 1.57
SLC12A4-213ENST00000573702 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
SLC12A4-213ENST00000573702 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
SLC12A4-213ENST00000573702 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
SLC12A4-213ENST00000573702 NUP160Q12769 1436 aa24.74■■□□□ 1.55
SLC12A4-213ENST00000573702 KIF27Q86VH2 1401 aa24.72■■□□□ 1.55
SLC12A4-213ENST00000573702 ERCC6L2Q5T890 1561 aa24.69■■□□□ 1.54
SLC12A4-213ENST00000573702 IGF1RP08069 1367 aa24.66■■□□□ 1.54
SLC12A4-213ENST00000573702 TRHP20396 242 aaPredicted RBP24.65■■□□□ 1.54
SLC12A4-213ENST00000573702 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
SLC12A4-213ENST00000573702 CUL7Q14999 1698 aa24.58■■□□□ 1.53
SLC12A4-213ENST00000573702 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms