RNA–Protein interactions for RNA: ENST00000533072.1

TTC17-212, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best)

Gene TTC17, Length 2,607 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-212ENST00000533072 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
TTC17-212ENST00000533072 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
TTC17-212ENST00000533072 NISCHQ9Y2I1 1504 aa12.4□□□□□ -0.42
TTC17-212ENST00000533072 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
TTC17-212ENST00000533072 SENP3Q9H4L4 574 aaPredicted RBP11.56□□□□□ -0.56
TTC17-212ENST00000533072 CCDC180Q9P1Z9 1646 aa11.01□□□□□ -0.65
TTC17-212ENST00000533072 PLPPR3Q6T4P5 718 aa10.76□□□□□ -0.69
TTC17-212ENST00000533072 FOXD1Q16676 465 aa10.73□□□□□ -0.69
TTC17-212ENST00000533072 ABCC9O60706 1549 aa10.69□□□□□ -0.7
TTC17-212ENST00000533072 NACADO15069 1562 aa10.36□□□□□ -0.75
TTC17-212ENST00000533072 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
TTC17-212ENST00000533072 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
TTC17-212ENST00000533072 ZCCHC6Q5VYS8 1495 aaKnown RBP10.34□□□□□ -0.75
TTC17-212ENST00000533072 DCAF8L2P0C7V8 631 aa10.32□□□□□ -0.76
TTC17-212ENST00000533072 DCAF1Q9Y4B6 1507 aa10.3□□□□□ -0.76
TTC17-212ENST00000533072 ADRA2BP18089 450 aa10.3□□□□□ -0.76
TTC17-212ENST00000533072 PPP6R1Q9UPN7 881 aa10.3□□□□□ -0.76
TTC17-212ENST00000533072 PIAS4Q8N2W9 510 aaPredicted RBP10.14□□□□□ -0.79
TTC17-212ENST00000533072 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.81
TTC17-212ENST00000533072 PABPN1Q86U42 306 aaKnown RBP eCLIP10.01□□□□□ -0.811e-7■■■□□ 15.5
TTC17-212ENST00000533072 SCRIBQ14160 1630 aa10□□□□□ -0.81
TTC17-212ENST00000533072 SHROOM4Q9ULL8 1493 aa9.99□□□□□ -0.81
TTC17-212ENST00000533072 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
TTC17-212ENST00000533072 MSH5O43196 834 aa9.91□□□□□ -0.82
TTC17-212ENST00000533072 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.85
TTC17-212ENST00000533072 EIF4G1Q04637 1599 aaKnown RBP9.74□□□□□ -0.85
TTC17-212ENST00000533072 CC2D2AQ9P2K1 1620 aa9.68□□□□□ -0.86
TTC17-212ENST00000533072 CECR2Q9BXF3 1484 aa9.64□□□□□ -0.87
TTC17-212ENST00000533072 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
TTC17-212ENST00000533072 SMARCA4P51532 1647 aa9.59□□□□□ -0.87
TTC17-212ENST00000533072 NCAPD3P42695 1498 aa9.57□□□□□ -0.88
TTC17-212ENST00000533072 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
TTC17-212ENST00000533072 ATAD2BQ9ULI0 1458 aa9.56□□□□□ -0.88
TTC17-212ENST00000533072 MROH2BQ7Z745 1585 aa9.53□□□□□ -0.88
TTC17-212ENST00000533072 PEG3Q9GZU2 1588 aa9.53□□□□□ -0.88
TTC17-212ENST00000533072 HMGXB3Q12766 1538 aa9.51□□□□□ -0.89
TTC17-212ENST00000533072 PPP4R3CPQ6ZMV5 832 aa9.48□□□□□ -0.89
TTC17-212ENST00000533072 BAZ1BQ9UIG0 1483 aaKnown RBP9.48□□□□□ -0.89
TTC17-212ENST00000533072 RSF1Q96T23 1441 aaPredicted RBP9.46□□□□□ -0.89
TTC17-212ENST00000533072 SCAF1Q9H7N4 1312 aaKnown RBP9.42□□□□□ -0.9
TTC17-212ENST00000533072 WIZO95785 1651 aa9.4□□□□□ -0.9
TTC17-212ENST00000533072 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
TTC17-212ENST00000533072 MAPK8IP2Q13387 824 aaPredicted RBP9.35□□□□□ -0.91
TTC17-212ENST00000533072 LAMC3Q9Y6N6 1575 aa9.29□□□□□ -0.92
TTC17-212ENST00000533072 CADPSQ9ULU8 1353 aa9.29□□□□□ -0.92
TTC17-212ENST00000533072 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
TTC17-212ENST00000533072 ERCC6Q03468 1493 aa9.25□□□□□ -0.93
TTC17-212ENST00000533072 NESP48681 1621 aa9.25□□□□□ -0.93
TTC17-212ENST00000533072 KCNA4P22459 653 aa9.24□□□□□ -0.93
TTC17-212ENST00000533072 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
TTC17-212ENST00000533072 CFTRP13569 1480 aa9.23□□□□□ -0.93
TTC17-212ENST00000533072 SUPT5HO00267 1087 aaKnown RBP9.23□□□□□ -0.93
TTC17-212ENST00000533072 NCBP3Q53F19 620 aaKnown RBP9.22□□□□□ -0.93
TTC17-212ENST00000533072 CNKSR2Q8WXI2 1034 aa9.21□□□□□ -0.93
TTC17-212ENST00000533072 DMRT2Q9Y5R5 561 aa9.21□□□□□ -0.94
TTC17-212ENST00000533072 CUX2O14529 1486 aa9.17□□□□□ -0.94
TTC17-212ENST00000533072 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
TTC17-212ENST00000533072 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
TTC17-212ENST00000533072 MRC2Q9UBG0 1479 aa9.13□□□□□ -0.95
TTC17-212ENST00000533072 KIF21AQ7Z4S6 1674 aa9.12□□□□□ -0.95
TTC17-212ENST00000533072 THOC2Q8NI27 1593 aaKnown RBP9.11□□□□□ -0.95
TTC17-212ENST00000533072 PRDM2Q13029 1718 aa9.11□□□□□ -0.95
TTC17-212ENST00000533072 NPM3O75607 178 aaKnown RBP9.09□□□□□ -0.95
TTC17-212ENST00000533072 WDR62O43379 1518 aa9.09□□□□□ -0.95
TTC17-212ENST00000533072 POTEDQ86YR6 584 aa9.08□□□□□ -0.96
TTC17-212ENST00000533072 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
TTC17-212ENST00000533072 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
TTC17-212ENST00000533072 RNF216Q9NWF9 866 aaPredicted RBP9.03□□□□□ -0.96
TTC17-212ENST00000533072 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
TTC17-212ENST00000533072 DNMBPQ6XZF7 1577 aa9.01□□□□□ -0.97
TTC17-212ENST00000533072 HOXD11P31277 338 aaPredicted RBP9□□□□□ -0.97
TTC17-212ENST00000533072 IFT140Q96RY7 1462 aa8.98□□□□□ -0.97
TTC17-212ENST00000533072 EHMT2Q96KQ7 1210 aa8.95□□□□□ -0.98
TTC17-212ENST00000533072 CUX1P39880 1505 aa8.94□□□□□ -0.98
TTC17-212ENST00000533072 POLA1P09884 1462 aaPredicted RBP8.93□□□□□ -0.98
TTC17-212ENST00000533072 WRNQ14191 1432 aaPredicted RBP eCLIP8.93□□□□□ -0.98
TTC17-212ENST00000533072 SOGA1O94964 1423 aa8.92□□□□□ -0.98
TTC17-212ENST00000533072 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
TTC17-212ENST00000533072 WDR97A6NE52 1622 aa8.89□□□□□ -0.99
TTC17-212ENST00000533072 TOP2BQ02880 1626 aa8.89□□□□□ -0.99
TTC17-212ENST00000533072 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
TTC17-212ENST00000533072 DCAF8L1A6NGE4 600 aa8.88□□□□□ -0.99
TTC17-212ENST00000533072 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
TTC17-212ENST00000533072 RAD54L2Q9Y4B4 1467 aa8.88□□□□□ -0.99
TTC17-212ENST00000533072 ZNF608Q9ULD9 1512 aaPredicted RBP8.87□□□□□ -0.99
TTC17-212ENST00000533072 ABCA10Q8WWZ4 1543 aa8.86□□□□□ -0.99
TTC17-212ENST00000533072 SYNJ1O43426 1573 aa8.85□□□□□ -0.99
TTC17-212ENST00000533072 AQRO60306 1485 aaKnown RBP eCLIP8.84□□□□□ -0.99
TTC17-212ENST00000533072 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
TTC17-212ENST00000533072 EIF4G3O43432 1585 aaKnown RBP8.84□□□□□ -1
TTC17-212ENST00000533072 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
TTC17-212ENST00000533072 GRIN2BQ13224 1484 aa8.82□□□□□ -1
TTC17-212ENST00000533072 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
TTC17-212ENST00000533072 OSCARQ8IYS5 282 aa8.8□□□□□ -1
TTC17-212ENST00000533072 SLC4A1APQ9BWU0 796 aaKnown RBP8.8□□□□□ -1
TTC17-212ENST00000533072 MAGI1Q96QZ7 1491 aaPredicted RBP8.79□□□□□ -1
TTC17-212ENST00000533072 ABCA5Q8WWZ7 1642 aa8.78□□□□□ -1
TTC17-212ENST00000533072 SNAPC4Q5SXM2 1469 aa8.77□□□□□ -1.01
TTC17-212ENST00000533072 KIF27Q86VH2 1401 aa8.76□□□□□ -1.01
TTC17-212ENST00000533072 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms