RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-208ENST00000607559 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
TPM2-208ENST00000607559 NISCHQ9Y2I1 1504 aa26.58■■□□□ 1.85
TPM2-208ENST00000607559 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
TPM2-208ENST00000607559 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
TPM2-208ENST00000607559 ABCC9O60706 1549 aa23.42■■□□□ 1.34
TPM2-208ENST00000607559 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
TPM2-208ENST00000607559 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
TPM2-208ENST00000607559 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
TPM2-208ENST00000607559 NACADO15069 1562 aa22.4■■□□□ 1.18
TPM2-208ENST00000607559 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
TPM2-208ENST00000607559 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
TPM2-208ENST00000607559 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
TPM2-208ENST00000607559 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
TPM2-208ENST00000607559 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
TPM2-208ENST00000607559 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.096e-7■■■□□ 15.6
TPM2-208ENST00000607559 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
TPM2-208ENST00000607559 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
TPM2-208ENST00000607559 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
TPM2-208ENST00000607559 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
TPM2-208ENST00000607559 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
TPM2-208ENST00000607559 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
TPM2-208ENST00000607559 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
TPM2-208ENST00000607559 FOXD1Q16676 465 aa21.12■□□□□ 0.97
TPM2-208ENST00000607559 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
TPM2-208ENST00000607559 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
TPM2-208ENST00000607559 ATAD2BQ9ULI0 1458 aa20.65■□□□□ 0.9
TPM2-208ENST00000607559 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
TPM2-208ENST00000607559 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
TPM2-208ENST00000607559 SMARCA2P51531 1590 aa20.58■□□□□ 0.88
TPM2-208ENST00000607559 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
TPM2-208ENST00000607559 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
TPM2-208ENST00000607559 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
TPM2-208ENST00000607559 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
TPM2-208ENST00000607559 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
TPM2-208ENST00000607559 CUX2O14529 1486 aa20.24■□□□□ 0.83
TPM2-208ENST00000607559 DNAJC5Q9H3Z4 198 aa20.2■□□□□ 0.82
TPM2-208ENST00000607559 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
TPM2-208ENST00000607559 ADRA2BP18089 450 aa20.19■□□□□ 0.82
TPM2-208ENST00000607559 NESP48681 1621 aa20.17■□□□□ 0.82
TPM2-208ENST00000607559 RSF1Q96T23 1441 aaPredicted RBP20.17■□□□□ 0.82
TPM2-208ENST00000607559 LAMC3Q9Y6N6 1575 aa20.14■□□□□ 0.81
TPM2-208ENST00000607559 WIZO95785 1651 aa20.12■□□□□ 0.81
TPM2-208ENST00000607559 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.81
TPM2-208ENST00000607559 PDS5BQ9NTI5 1447 aa20.05■□□□□ 0.8
TPM2-208ENST00000607559 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
TPM2-208ENST00000607559 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
TPM2-208ENST00000607559 CFTRP13569 1480 aa19.92■□□□□ 0.78
TPM2-208ENST00000607559 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
TPM2-208ENST00000607559 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
TPM2-208ENST00000607559 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
TPM2-208ENST00000607559 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
TPM2-208ENST00000607559 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
TPM2-208ENST00000607559 WDR62O43379 1518 aa19.76■□□□□ 0.75
TPM2-208ENST00000607559 CEP164Q9UPV0 1460 aa19.76■□□□□ 0.75
TPM2-208ENST00000607559 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
TPM2-208ENST00000607559 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
TPM2-208ENST00000607559 MSH5O43196 834 aa19.53■□□□□ 0.72
TPM2-208ENST00000607559 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
TPM2-208ENST00000607559 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
TPM2-208ENST00000607559 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
TPM2-208ENST00000607559 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
TPM2-208ENST00000607559 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
TPM2-208ENST00000607559 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
TPM2-208ENST00000607559 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
TPM2-208ENST00000607559 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
TPM2-208ENST00000607559 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
TPM2-208ENST00000607559 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
TPM2-208ENST00000607559 SOGA1O94964 1423 aa19.2■□□□□ 0.66
TPM2-208ENST00000607559 CUX1P39880 1505 aa19.18■□□□□ 0.66
TPM2-208ENST00000607559 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
TPM2-208ENST00000607559 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
TPM2-208ENST00000607559 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
TPM2-208ENST00000607559 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.65
TPM2-208ENST00000607559 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
TPM2-208ENST00000607559 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
TPM2-208ENST00000607559 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
TPM2-208ENST00000607559 GRIN2BQ13224 1484 aa19■□□□□ 0.63
TPM2-208ENST00000607559 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
TPM2-208ENST00000607559 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
TPM2-208ENST00000607559 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
TPM2-208ENST00000607559 MAGI1Q96QZ7 1491 aaPredicted RBP18.98■□□□□ 0.63
TPM2-208ENST00000607559 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
TPM2-208ENST00000607559 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
TPM2-208ENST00000607559 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
TPM2-208ENST00000607559 FBLN2P98095 1184 aa18.95■□□□□ 0.62
TPM2-208ENST00000607559 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
TPM2-208ENST00000607559 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
TPM2-208ENST00000607559 CHMP7Q8WUX9 453 aaPredicted RBP18.92■□□□□ 0.62
TPM2-208ENST00000607559 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
TPM2-208ENST00000607559 CHD1O14646 1710 aa18.91■□□□□ 0.62
TPM2-208ENST00000607559 SYNJ2O15056 1496 aa18.91■□□□□ 0.62
TPM2-208ENST00000607559 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
TPM2-208ENST00000607559 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
TPM2-208ENST00000607559 CYB5RLQ6IPT4 315 aa18.85■□□□□ 0.61
TPM2-208ENST00000607559 CLASP1Q7Z460 1538 aa18.83■□□□□ 0.6
TPM2-208ENST00000607559 PBRM1Q86U86 1689 aa18.78■□□□□ 0.6
TPM2-208ENST00000607559 ERICH3Q5RHP9 1530 aa18.77■□□□□ 0.6
TPM2-208ENST00000607559 ARAP1Q96P48 1450 aa18.77■□□□□ 0.59
TPM2-208ENST00000607559 FHAD1B1AJZ9 1412 aa18.75■□□□□ 0.59
TPM2-208ENST00000607559 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms