RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 DCAF8L2P0C7V8 631 aa32.89■■■□□ 2.86
LTBP3-202ENST00000322147 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
LTBP3-202ENST00000322147 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
LTBP3-202ENST00000322147 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
LTBP3-202ENST00000322147 EHMT2Q96KQ7 1210 aa30.81■■■□□ 2.52
LTBP3-202ENST00000322147 FAM9AQ8IZU1 332 aaPredicted RBP29.98■■■□□ 2.39
LTBP3-202ENST00000322147 PCGF6Q9BYE7 350 aa29.79■■■□□ 2.36
LTBP3-202ENST00000322147 TTBK1Q5TCY1 1321 aaPredicted RBP29.65■■■□□ 2.34
LTBP3-202ENST00000322147 HRCP23327 699 aa29.48■■■□□ 2.31
LTBP3-202ENST00000322147 RANGAP1P46060 587 aaPredicted RBP29.13■■■□□ 2.25
LTBP3-202ENST00000322147 PPARGC1BQ86YN6 1023 aaKnown RBP29.1■■■□□ 2.25
LTBP3-202ENST00000322147 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
LTBP3-202ENST00000322147 LOC105371045A0A1W2PR82 267 aa28.98■■■□□ 2.23
LTBP3-202ENST00000322147 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
LTBP3-202ENST00000322147 APLP2Q06481 763 aa28.62■■■□□ 2.17
LTBP3-202ENST00000322147 CCER1Q8TC90 406 aaPredicted RBP28.51■■■□□ 2.15
LTBP3-202ENST00000322147 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
LTBP3-202ENST00000322147 UBTFP17480 764 aaKnown RBP28.49■■■□□ 2.15
LTBP3-202ENST00000322147 PELP1Q8IZL8 1130 aaKnown RBP28.47■■■□□ 2.15
LTBP3-202ENST00000322147 ATP1B4Q9UN42 357 aaPredicted RBP28.24■■■□□ 2.11
LTBP3-202ENST00000322147 TRIM26Q12899 539 aaPredicted RBP28.19■■■□□ 2.1
LTBP3-202ENST00000322147 YTHDC1Q96MU7 727 aaKnown RBP28.08■■■□□ 2.09
LTBP3-202ENST00000322147 ZEB1P37275 1124 aaPredicted RBP28.03■■■□□ 2.08
LTBP3-202ENST00000322147 DCAF1Q9Y4B6 1507 aa27.93■■■□□ 2.06
LTBP3-202ENST00000322147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.85■■■□□ 2.05
LTBP3-202ENST00000322147 ITGAEP38570 1179 aa27.83■■■□□ 2.05
LTBP3-202ENST00000322147 HNRNPUL2Q1KMD3 747 aaKnown RBP27.82■■■□□ 2.04
LTBP3-202ENST00000322147 PABPN1Q86U42 306 aaKnown RBP eCLIP27.81■■■□□ 2.041e-7■■■□□ 15.7
LTBP3-202ENST00000322147 SCAF1Q9H7N4 1312 aaKnown RBP27.79■■■□□ 2.04
LTBP3-202ENST00000322147 ABCC9O60706 1549 aa27.78■■■□□ 2.04
LTBP3-202ENST00000322147 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
LTBP3-202ENST00000322147 CENPBP07199 599 aaPredicted RBP27.69■■■□□ 2.02
LTBP3-202ENST00000322147 CCDC180Q9P1Z9 1646 aa27.43■■□□□ 1.98
LTBP3-202ENST00000322147 MYT1Q01538 1121 aa27.37■■□□□ 1.97
LTBP3-202ENST00000322147 ACIN1Q9UKV3 1341 aaKnown RBP27.29■■□□□ 1.96
LTBP3-202ENST00000322147 CNGB1Q14028 1251 aaPredicted RBP27.27■■□□□ 1.96
LTBP3-202ENST00000322147 GTF3C3Q9Y5Q9 886 aa27.23■■□□□ 1.95
LTBP3-202ENST00000322147 NEUROD1Q13562 356 aa27.2■■□□□ 1.95
LTBP3-202ENST00000322147 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.94
LTBP3-202ENST00000322147 POLR3GLQ9BT43 218 aa27■■□□□ 1.91
LTBP3-202ENST00000322147 FAM50AQ14320 339 aaKnown RBP26.87■■□□□ 1.89
LTBP3-202ENST00000322147 P3H3Q8IVL6 736 aa26.83■■□□□ 1.89
LTBP3-202ENST00000322147 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
LTBP3-202ENST00000322147 CSRNP3Q8WYN3 585 aa26.81■■□□□ 1.88
LTBP3-202ENST00000322147 NEFLP07196 543 aa26.81■■□□□ 1.88
LTBP3-202ENST00000322147 ARID3CA6NKF2 412 aa26.71■■□□□ 1.87
LTBP3-202ENST00000322147 ERICH6Q7L0X2 663 aa26.66■■□□□ 1.86
LTBP3-202ENST00000322147 BCANQ96GW7 911 aa26.59■■□□□ 1.85
LTBP3-202ENST00000322147 ZNF316A6NFI3 1004 aaPredicted RBP26.5■■□□□ 1.83
LTBP3-202ENST00000322147 MYT1LQ9UL68 1186 aa26.49■■□□□ 1.83
LTBP3-202ENST00000322147 TRIM52Q96A61 297 aa26.46■■□□□ 1.83
LTBP3-202ENST00000322147 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
LTBP3-202ENST00000322147 FBLN2P98095 1184 aa26.36■■□□□ 1.81
LTBP3-202ENST00000322147 ZNF326Q5BKZ1 582 aaKnown RBP26.35■■□□□ 1.81
LTBP3-202ENST00000322147 MIER1Q8N108 512 aa26.27■■□□□ 1.8
LTBP3-202ENST00000322147 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
LTBP3-202ENST00000322147 HIRIP3Q9BW71 556 aaPredicted RBP26.19■■□□□ 1.78
LTBP3-202ENST00000322147 CECR2Q9BXF3 1484 aa26.1■■□□□ 1.77
LTBP3-202ENST00000322147 DDX10Q13206 875 aaKnown RBP26.04■■□□□ 1.76
LTBP3-202ENST00000322147 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
LTBP3-202ENST00000322147 ZNF777Q9ULD5 760 aaPredicted RBP26.01■■□□□ 1.75
LTBP3-202ENST00000322147 CHIC2Q9UKJ5 165 aa25.99■■□□□ 1.75
LTBP3-202ENST00000322147 ANP32CO43423 234 aa25.98■■□□□ 1.75
LTBP3-202ENST00000322147 CEP162Q5TB80 1403 aa25.89■■□□□ 1.73
LTBP3-202ENST00000322147 CLIP1P30622 1438 aa25.83■■□□□ 1.73
LTBP3-202ENST00000322147 SENP3-EIF4A1A0A087X0R7 540 aa25.82■■□□□ 1.72
LTBP3-202ENST00000322147 SUPT16HQ9Y5B9 1047 aaKnown RBP25.76■■□□□ 1.71
LTBP3-202ENST00000322147 SOGA1O94964 1423 aa25.75■■□□□ 1.71
LTBP3-202ENST00000322147 FKBP8Q14318 412 aa25.74■■□□□ 1.71
LTBP3-202ENST00000322147 CLSPNQ9HAW4 1339 aa25.69■■□□□ 1.7
LTBP3-202ENST00000322147 SALL2Q9Y467 1007 aaPredicted RBP25.68■■□□□ 1.7
LTBP3-202ENST00000322147 ANP32EQ9BTT0 268 aa25.68■■□□□ 1.7
LTBP3-202ENST00000322147 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
LTBP3-202ENST00000322147 TNIKQ9UKE5 1360 aa25.65■■□□□ 1.7
LTBP3-202ENST00000322147 FAM9BQ8IZU0 186 aa25.64■■□□□ 1.7
LTBP3-202ENST00000322147 MROH2BQ7Z745 1585 aa25.64■■□□□ 1.7
LTBP3-202ENST00000322147 IRX6P78412 446 aaPredicted RBP25.64■■□□□ 1.69
LTBP3-202ENST00000322147 HNRNPUQ00839 825 aaKnown RBP eCLIP25.64■■□□□ 1.69
LTBP3-202ENST00000322147 RRP7BPQ9NSQ0 103 aa25.62■■□□□ 1.69
LTBP3-202ENST00000322147 TONSLQ96HA7 1378 aa25.61■■□□□ 1.69
LTBP3-202ENST00000322147 DAXXQ9UER7 740 aaPredicted RBP25.58■■□□□ 1.69
LTBP3-202ENST00000322147 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
LTBP3-202ENST00000322147 TSHZ2Q9NRE2 1034 aa25.57■■□□□ 1.68
LTBP3-202ENST00000322147 BCL11AQ9H165 835 aa25.56■■□□□ 1.68
LTBP3-202ENST00000322147 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
LTBP3-202ENST00000322147 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
LTBP3-202ENST00000322147 WIZO95785 1651 aa25.49■■□□□ 1.67
LTBP3-202ENST00000322147 KDM2AQ9Y2K7 1162 aa25.48■■□□□ 1.67
LTBP3-202ENST00000322147 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
LTBP3-202ENST00000322147 SENP3Q9H4L4 574 aaPredicted RBP25.46■■□□□ 1.67
LTBP3-202ENST00000322147 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.67
LTBP3-202ENST00000322147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.45■■□□□ 1.661e-6■□□□□ 10.2
LTBP3-202ENST00000322147 MTUS2Q5JR59 1369 aa25.44■■□□□ 1.66
LTBP3-202ENST00000322147 KANK4Q5T7N3 995 aaPredicted RBP25.43■■□□□ 1.66
LTBP3-202ENST00000322147 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
LTBP3-202ENST00000322147 EEA1Q15075 1411 aa25.34■■□□□ 1.65
LTBP3-202ENST00000322147 NACADO15069 1562 aa25.33■■□□□ 1.64
LTBP3-202ENST00000322147 NPM2Q86SE8 214 aaKnown RBP25.32■■□□□ 1.64
LTBP3-202ENST00000322147 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
LTBP3-202ENST00000322147 CHGAP10645 457 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms