Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 AL121753.2-201ENST00000624581 1461 ntBASIC13.75□□□□□ -0.21
SLC1A1P43005 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC1A1P43005 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 CASC4P1-201ENST00000456608 1312 ntBASIC13.75□□□□□ -0.21
SLC1A1P43005 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.75□□□□□ -0.21
SLC1A1P43005 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 AC106818.1-201ENST00000623223 3242 ntBASIC13.75□□□□□ -0.21
SLC1A1P43005 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.75□□□□□ -0.21
SLC1A1P43005 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SLC1A1P43005 DEFA8P-201ENST00000457582 285 ntBASIC13.75□□□□□ -0.21
SLC1A1P43005 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.75□□□□□ -0.21
SLC1A1P43005 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.75□□□□□ -0.21
SLC1A1P43005 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
SLC1A1P43005 PRKXP1-201ENST00000561423 1122 ntBASIC13.75□□□□□ -0.21
SLC1A1P43005 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC1A1P43005 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 AL805961.1-201ENST00000642026 753 ntBASIC13.75□□□□□ -0.21
SLC1A1P43005 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SLC1A1P43005 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC1A1P43005 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SLC1A1P43005 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC1A1P43005 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SLC1A1P43005 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC1A1P43005 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC1A1P43005 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SLC1A1P43005 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC1A1P43005 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 AC092810.2-201ENST00000431570 362 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 UBTFL5-201ENST00000443682 1191 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.74□□□□□ -0.21
SLC1A1P43005 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.74□□□□□ -0.21
SLC1A1P43005 KRT18P37-201ENST00000520711 1282 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 FAM86B3P-203ENST00000523992 854 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC1A1P43005 AC211476.2-201ENST00000608799 708 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 AL118522.1-201ENST00000611368 560 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 YRDCP1-201ENST00000621419 643 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 AC126755.5-201ENST00000622756 267 ntBASIC13.74□□□□□ -0.21
SLC1A1P43005 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SLC1A1P43005 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC1A1P43005 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC1A1P43005 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 MKRN7P-201ENST00000433469 1371 ntBASIC13.73□□□□□ -0.21
SLC1A1P43005 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms