RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
SMARCA5-201ENST00000283131 PELP1Q8IZL8 1130 aaKnown RBP21.85■■□□□ 1.09
SMARCA5-201ENST00000283131 ERICH6Q7L0X2 663 aa21■□□□□ 0.95
SMARCA5-201ENST00000283131 CCER1Q8TC90 406 aaPredicted RBP20.86■□□□□ 0.93
SMARCA5-201ENST00000283131 APLP2Q06481 763 aa20.64■□□□□ 0.89
SMARCA5-201ENST00000283131 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
SMARCA5-201ENST00000283131 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
SMARCA5-201ENST00000283131 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
SMARCA5-201ENST00000283131 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
SMARCA5-201ENST00000283131 MYT1Q01538 1121 aa20.14■□□□□ 0.82
SMARCA5-201ENST00000283131 NEFLP07196 543 aa20.11■□□□□ 0.81
SMARCA5-201ENST00000283131 DAXXQ9UER7 740 aaPredicted RBP20.01■□□□□ 0.79
SMARCA5-201ENST00000283131 YTHDC1Q96MU7 727 aaKnown RBP19.98■□□□□ 0.79
SMARCA5-201ENST00000283131 TTBK1Q5TCY1 1321 aaPredicted RBP19.92■□□□□ 0.78
SMARCA5-201ENST00000283131 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.77
SMARCA5-201ENST00000283131 ATP1B4Q9UN42 357 aaPredicted RBP19.77■□□□□ 0.76
SMARCA5-201ENST00000283131 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
SMARCA5-201ENST00000283131 ZEB1P37275 1124 aaPredicted RBP19.64■□□□□ 0.73
SMARCA5-201ENST00000283131 RANGAP1P46060 587 aaPredicted RBP19.62■□□□□ 0.73
SMARCA5-201ENST00000283131 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.7
SMARCA5-201ENST00000283131 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
SMARCA5-201ENST00000283131 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
SMARCA5-201ENST00000283131 POLR3GLQ9BT43 218 aa19.29■□□□□ 0.68
SMARCA5-201ENST00000283131 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
SMARCA5-201ENST00000283131 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
SMARCA5-201ENST00000283131 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
SMARCA5-201ENST00000283131 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
SMARCA5-201ENST00000283131 CNGB1Q14028 1251 aaPredicted RBP19.02■□□□□ 0.64
SMARCA5-201ENST00000283131 TRIM41Q8WV44 630 aa19■□□□□ 0.63
SMARCA5-201ENST00000283131 ZBTB47Q9UFB7 747 aaPredicted RBP18.97■□□□□ 0.63
SMARCA5-201ENST00000283131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
SMARCA5-201ENST00000283131 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
SMARCA5-201ENST00000283131 ITGAEP38570 1179 aa18.78■□□□□ 0.6
SMARCA5-201ENST00000283131 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
SMARCA5-201ENST00000283131 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.58
SMARCA5-201ENST00000283131 BCL11AQ9H165 835 aa18.62■□□□□ 0.57
SMARCA5-201ENST00000283131 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
SMARCA5-201ENST00000283131 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.56
SMARCA5-201ENST00000283131 NEFMP07197 916 aa18.5■□□□□ 0.55
SMARCA5-201ENST00000283131 CDK11AQ9UQ88 783 aaPredicted RBP18.49■□□□□ 0.55
SMARCA5-201ENST00000283131 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
SMARCA5-201ENST00000283131 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
SMARCA5-201ENST00000283131 EIF5BO60841 1220 aaKnown RBP18.45■□□□□ 0.54
SMARCA5-201ENST00000283131 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
SMARCA5-201ENST00000283131 HRCP23327 699 aa18.42■□□□□ 0.54
SMARCA5-201ENST00000283131 CDK11BP21127 795 aaKnown RBP18.4■□□□□ 0.54
SMARCA5-201ENST00000283131 HSP90AA1P07900 732 aaKnown RBP18.34■□□□□ 0.53
SMARCA5-201ENST00000283131 BCANQ96GW7 911 aa18.31■□□□□ 0.52
SMARCA5-201ENST00000283131 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
SMARCA5-201ENST00000283131 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
SMARCA5-201ENST00000283131 DIEXFQ68CQ4 756 aaKnown RBP18.22■□□□□ 0.51
SMARCA5-201ENST00000283131 ANP32CO43423 234 aa18.2■□□□□ 0.5
SMARCA5-201ENST00000283131 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
SMARCA5-201ENST00000283131 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
SMARCA5-201ENST00000283131 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
SMARCA5-201ENST00000283131 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
SMARCA5-201ENST00000283131 NEUROD1Q13562 356 aa18.09■□□□□ 0.49
SMARCA5-201ENST00000283131 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
SMARCA5-201ENST00000283131 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
SMARCA5-201ENST00000283131 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
SMARCA5-201ENST00000283131 ARXQ96QS3 562 aa17.89■□□□□ 0.45
SMARCA5-201ENST00000283131 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
SMARCA5-201ENST00000283131 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
SMARCA5-201ENST00000283131 A0A0G2JS52 829 aa17.77■□□□□ 0.44
SMARCA5-201ENST00000283131 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
SMARCA5-201ENST00000283131 NCLP19338 710 aaKnown RBP17.76■□□□□ 0.43
SMARCA5-201ENST00000283131 TRIM44Q96DX7 344 aaPredicted RBP17.75■□□□□ 0.43
SMARCA5-201ENST00000283131 ZRSR1Q15695 479 aaKnown RBP17.75■□□□□ 0.43
SMARCA5-201ENST00000283131 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
SMARCA5-201ENST00000283131 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
SMARCA5-201ENST00000283131 NBR1Q14596 966 aa17.7■□□□□ 0.42
SMARCA5-201ENST00000283131 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
SMARCA5-201ENST00000283131 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
SMARCA5-201ENST00000283131 FBLN2P98095 1184 aa17.66■□□□□ 0.42
SMARCA5-201ENST00000283131 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
SMARCA5-201ENST00000283131 DNTTIP2Q5QJE6 756 aaKnown RBP17.62■□□□□ 0.41
SMARCA5-201ENST00000283131 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
SMARCA5-201ENST00000283131 PTMAP06454 111 aaKnown RBP17.61■□□□□ 0.41
SMARCA5-201ENST00000283131 GOLGA6L22H0YM25 854 aa17.61■□□□□ 0.41
SMARCA5-201ENST00000283131 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
SMARCA5-201ENST00000283131 CCDC136Q96JN2 1154 aa17.55■□□□□ 0.4
SMARCA5-201ENST00000283131 FKBP8Q14318 412 aa17.55■□□□□ 0.4
SMARCA5-201ENST00000283131 BECN1Q14457 450 aa17.53■□□□□ 0.4
SMARCA5-201ENST00000283131 SALL2Q9Y467 1007 aaPredicted RBP17.52■□□□□ 0.4
SMARCA5-201ENST00000283131 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMARCA5-201ENST00000283131 GOLGA6L6A8MZA4 724 aa17.48■□□□□ 0.39
SMARCA5-201ENST00000283131 ZNF777Q9ULD5 760 aaPredicted RBP17.48■□□□□ 0.39
SMARCA5-201ENST00000283131 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMARCA5-201ENST00000283131 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
SMARCA5-201ENST00000283131 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
SMARCA5-201ENST00000283131 NRDCO43847 1150 aa17.43■□□□□ 0.38
SMARCA5-201ENST00000283131 DDRGK1Q96HY6 314 aa17.42■□□□□ 0.38
SMARCA5-201ENST00000283131 CASC1Q6TDU7 716 aa17.42■□□□□ 0.38
SMARCA5-201ENST00000283131 CLSTN1O94985 981 aa17.41■□□□□ 0.38
SMARCA5-201ENST00000283131 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
SMARCA5-201ENST00000283131 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.38
SMARCA5-201ENST00000283131 NPHP1O15259 732 aa17.37■□□□□ 0.37
SMARCA5-201ENST00000283131 L1TD1Q5T7N2 865 aaKnown RBP17.37■□□□□ 0.37
SMARCA5-201ENST00000283131 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
SMARCA5-201ENST00000283131 C14orf37Q86TY3 774 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms