RNA–Protein interactions for RNA: ENST00000428646.1

AL355482.2-201, humanhuman

TSL 2 BASIC

Gene AL355482.2, Length 1,145 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355482.2-201ENST00000428646 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
AL355482.2-201ENST00000428646 CCDC180Q9P1Z9 1646 aa28.85■■■□□ 2.21
AL355482.2-201ENST00000428646 ABCC9O60706 1549 aa28.08■■■□□ 2.09
AL355482.2-201ENST00000428646 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
AL355482.2-201ENST00000428646 NACADO15069 1562 aa27.09■■□□□ 1.93
AL355482.2-201ENST00000428646 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
AL355482.2-201ENST00000428646 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
AL355482.2-201ENST00000428646 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.9
AL355482.2-201ENST00000428646 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
AL355482.2-201ENST00000428646 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
AL355482.2-201ENST00000428646 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
AL355482.2-201ENST00000428646 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
AL355482.2-201ENST00000428646 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
AL355482.2-201ENST00000428646 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
AL355482.2-201ENST00000428646 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
AL355482.2-201ENST00000428646 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
AL355482.2-201ENST00000428646 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
AL355482.2-201ENST00000428646 CC2D2AQ9P2K1 1620 aa25.44■■□□□ 1.66
AL355482.2-201ENST00000428646 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
AL355482.2-201ENST00000428646 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
AL355482.2-201ENST00000428646 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
AL355482.2-201ENST00000428646 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
AL355482.2-201ENST00000428646 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
AL355482.2-201ENST00000428646 ATAD2BQ9ULI0 1458 aa25■■□□□ 1.59
AL355482.2-201ENST00000428646 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
AL355482.2-201ENST00000428646 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
AL355482.2-201ENST00000428646 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
AL355482.2-201ENST00000428646 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
AL355482.2-201ENST00000428646 BAZ1BQ9UIG0 1483 aaKnown RBP24.8■■□□□ 1.56
AL355482.2-201ENST00000428646 WIZO95785 1651 aa24.78■■□□□ 1.56
AL355482.2-201ENST00000428646 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
AL355482.2-201ENST00000428646 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
AL355482.2-201ENST00000428646 NESP48681 1621 aa24.34■■□□□ 1.49
AL355482.2-201ENST00000428646 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
AL355482.2-201ENST00000428646 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
AL355482.2-201ENST00000428646 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
AL355482.2-201ENST00000428646 CCDC88BA6NC98 1476 aa24.21■■□□□ 1.47
AL355482.2-201ENST00000428646 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
AL355482.2-201ENST00000428646 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
AL355482.2-201ENST00000428646 CFTRP13569 1480 aa24.13■■□□□ 1.45
AL355482.2-201ENST00000428646 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
AL355482.2-201ENST00000428646 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
AL355482.2-201ENST00000428646 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
AL355482.2-201ENST00000428646 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
AL355482.2-201ENST00000428646 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
AL355482.2-201ENST00000428646 CUX2O14529 1486 aa23.92■■□□□ 1.42
AL355482.2-201ENST00000428646 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
AL355482.2-201ENST00000428646 WDR62O43379 1518 aa23.79■■□□□ 1.4
AL355482.2-201ENST00000428646 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
AL355482.2-201ENST00000428646 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
AL355482.2-201ENST00000428646 TOPBP1Q92547 1522 aa23.6■■□□□ 1.37
AL355482.2-201ENST00000428646 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
AL355482.2-201ENST00000428646 CUX1P39880 1505 aa23.46■■□□□ 1.35
AL355482.2-201ENST00000428646 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
AL355482.2-201ENST00000428646 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
AL355482.2-201ENST00000428646 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
AL355482.2-201ENST00000428646 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
AL355482.2-201ENST00000428646 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
AL355482.2-201ENST00000428646 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
AL355482.2-201ENST00000428646 SOGA1O94964 1423 aa23.32■■□□□ 1.32
AL355482.2-201ENST00000428646 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
AL355482.2-201ENST00000428646 ZNF608Q9ULD9 1512 aaPredicted RBP23.3■■□□□ 1.32
AL355482.2-201ENST00000428646 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
AL355482.2-201ENST00000428646 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
AL355482.2-201ENST00000428646 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
AL355482.2-201ENST00000428646 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
AL355482.2-201ENST00000428646 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.3
AL355482.2-201ENST00000428646 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
AL355482.2-201ENST00000428646 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
AL355482.2-201ENST00000428646 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
AL355482.2-201ENST00000428646 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
AL355482.2-201ENST00000428646 DNAJC5Q9H3Z4 198 aa23.05■■□□□ 1.28
AL355482.2-201ENST00000428646 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
AL355482.2-201ENST00000428646 GRIN2BQ13224 1484 aa23.03■■□□□ 1.28
AL355482.2-201ENST00000428646 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
AL355482.2-201ENST00000428646 CHD1O14646 1710 aa22.96■■□□□ 1.27
AL355482.2-201ENST00000428646 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
AL355482.2-201ENST00000428646 OSCARQ8IYS5 282 aa22.95■■□□□ 1.26
AL355482.2-201ENST00000428646 FBLN2P98095 1184 aa22.89■■□□□ 1.25
AL355482.2-201ENST00000428646 ERICH3Q5RHP9 1530 aa22.88■■□□□ 1.25
AL355482.2-201ENST00000428646 TRIM41Q8WV44 630 aa22.88■■□□□ 1.25
AL355482.2-201ENST00000428646 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
AL355482.2-201ENST00000428646 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
AL355482.2-201ENST00000428646 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
AL355482.2-201ENST00000428646 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
AL355482.2-201ENST00000428646 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
AL355482.2-201ENST00000428646 IGF1RP08069 1367 aa22.75■■□□□ 1.23
AL355482.2-201ENST00000428646 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
AL355482.2-201ENST00000428646 CUL7Q14999 1698 aa22.71■■□□□ 1.23
AL355482.2-201ENST00000428646 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
AL355482.2-201ENST00000428646 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
AL355482.2-201ENST00000428646 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
AL355482.2-201ENST00000428646 NUP160Q12769 1436 aa22.63■■□□□ 1.21
AL355482.2-201ENST00000428646 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
AL355482.2-201ENST00000428646 CEP170Q5SW79 1584 aa22.62■■□□□ 1.21
AL355482.2-201ENST00000428646 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.21
AL355482.2-201ENST00000428646 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.21
AL355482.2-201ENST00000428646 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.21
AL355482.2-201ENST00000428646 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
AL355482.2-201ENST00000428646 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms