RNA–Protein interactions for RNA: ENST00000490975.1

PFN2-212, Transcript of profilin 2, humanhuman

TSL 4 BASIC

Gene PFN2, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN2-212ENST00000490975 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
PFN2-212ENST00000490975 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
PFN2-212ENST00000490975 ABCC9O60706 1549 aa29.12■■■□□ 2.25
PFN2-212ENST00000490975 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
PFN2-212ENST00000490975 NACADO15069 1562 aa28.04■■■□□ 2.08
PFN2-212ENST00000490975 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
PFN2-212ENST00000490975 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
PFN2-212ENST00000490975 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.04
PFN2-212ENST00000490975 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
PFN2-212ENST00000490975 UNC13AQ9UPW8 1703 aa27.35■■□□□ 1.97
PFN2-212ENST00000490975 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
PFN2-212ENST00000490975 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.94
PFN2-212ENST00000490975 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
PFN2-212ENST00000490975 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
PFN2-212ENST00000490975 DNAJC5BQ9UF47 199 aa26.96■■□□□ 1.91
PFN2-212ENST00000490975 EIF4G1Q04637 1599 aaKnown RBP26.49■■□□□ 1.83
PFN2-212ENST00000490975 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
PFN2-212ENST00000490975 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
PFN2-212ENST00000490975 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PFN2-212ENST00000490975 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
PFN2-212ENST00000490975 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
PFN2-212ENST00000490975 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
PFN2-212ENST00000490975 SMARCA2P51531 1590 aa25.79■■□□□ 1.72
PFN2-212ENST00000490975 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
PFN2-212ENST00000490975 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
PFN2-212ENST00000490975 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
PFN2-212ENST00000490975 BAZ1BQ9UIG0 1483 aaKnown RBP25.55■■□□□ 1.68
PFN2-212ENST00000490975 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
PFN2-212ENST00000490975 WIZO95785 1651 aa25.34■■□□□ 1.65
PFN2-212ENST00000490975 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
PFN2-212ENST00000490975 NESP48681 1621 aa25.17■■□□□ 1.62
PFN2-212ENST00000490975 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
PFN2-212ENST00000490975 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
PFN2-212ENST00000490975 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
PFN2-212ENST00000490975 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
PFN2-212ENST00000490975 CUX2O14529 1486 aa25.03■■□□□ 1.6
PFN2-212ENST00000490975 CFTRP13569 1480 aa24.94■■□□□ 1.58
PFN2-212ENST00000490975 THOC2Q8NI27 1593 aaKnown RBP24.86■■□□□ 1.57
PFN2-212ENST00000490975 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
PFN2-212ENST00000490975 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
PFN2-212ENST00000490975 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
PFN2-212ENST00000490975 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
PFN2-212ENST00000490975 CEP164Q9UPV0 1460 aa24.71■■□□□ 1.55
PFN2-212ENST00000490975 WDR62O43379 1518 aa24.69■■□□□ 1.54
PFN2-212ENST00000490975 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
PFN2-212ENST00000490975 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
PFN2-212ENST00000490975 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
PFN2-212ENST00000490975 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
PFN2-212ENST00000490975 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
PFN2-212ENST00000490975 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
PFN2-212ENST00000490975 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
PFN2-212ENST00000490975 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
PFN2-212ENST00000490975 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
PFN2-212ENST00000490975 TARBP1Q13395 1621 aaKnown RBP24.11■■□□□ 1.45
PFN2-212ENST00000490975 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
PFN2-212ENST00000490975 CUX1P39880 1505 aa24.09■■□□□ 1.45
PFN2-212ENST00000490975 SOGA1O94964 1423 aa24.03■■□□□ 1.44
PFN2-212ENST00000490975 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
PFN2-212ENST00000490975 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
PFN2-212ENST00000490975 EIF4G3O43432 1585 aaKnown RBP23.97■■□□□ 1.43
PFN2-212ENST00000490975 OSCARQ8IYS5 282 aa23.97■■□□□ 1.43
PFN2-212ENST00000490975 RAD54L2Q9Y4B4 1467 aa23.97■■□□□ 1.43
PFN2-212ENST00000490975 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.425e-12■■■■■ 47.9
PFN2-212ENST00000490975 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
PFN2-212ENST00000490975 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
PFN2-212ENST00000490975 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
PFN2-212ENST00000490975 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
PFN2-212ENST00000490975 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
PFN2-212ENST00000490975 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
PFN2-212ENST00000490975 GRIN2BQ13224 1484 aa23.78■■□□□ 1.4
PFN2-212ENST00000490975 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
PFN2-212ENST00000490975 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
PFN2-212ENST00000490975 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
PFN2-212ENST00000490975 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
PFN2-212ENST00000490975 CHD1O14646 1710 aa23.67■■□□□ 1.38
PFN2-212ENST00000490975 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
PFN2-212ENST00000490975 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
PFN2-212ENST00000490975 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
PFN2-212ENST00000490975 FBLN2P98095 1184 aa23.61■■□□□ 1.37
PFN2-212ENST00000490975 ERICH3Q5RHP9 1530 aa23.57■■□□□ 1.36
PFN2-212ENST00000490975 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
PFN2-212ENST00000490975 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
PFN2-212ENST00000490975 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
PFN2-212ENST00000490975 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
PFN2-212ENST00000490975 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
PFN2-212ENST00000490975 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
PFN2-212ENST00000490975 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
PFN2-212ENST00000490975 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
PFN2-212ENST00000490975 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PFN2-212ENST00000490975 NUP160Q12769 1436 aa23.42■■□□□ 1.34
PFN2-212ENST00000490975 IGF1RP08069 1367 aa23.4■■□□□ 1.34
PFN2-212ENST00000490975 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
PFN2-212ENST00000490975 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
PFN2-212ENST00000490975 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
PFN2-212ENST00000490975 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
PFN2-212ENST00000490975 CUL7Q14999 1698 aa23.27■■□□□ 1.32
PFN2-212ENST00000490975 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
PFN2-212ENST00000490975 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
PFN2-212ENST00000490975 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
PFN2-212ENST00000490975 KIAA0586Q9BVV6 1533 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms