RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
CCDC117-201ENST00000249064 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
CCDC117-201ENST00000249064 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
CCDC117-201ENST00000249064 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
CCDC117-201ENST00000249064 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
CCDC117-201ENST00000249064 PPARGC1BQ86YN6 1023 aaKnown RBP21.75■■□□□ 1.07
CCDC117-201ENST00000249064 HRCP23327 699 aa21.66■■□□□ 1.06
CCDC117-201ENST00000249064 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
CCDC117-201ENST00000249064 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
CCDC117-201ENST00000249064 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
CCDC117-201ENST00000249064 FAM9AQ8IZU1 332 aaPredicted RBP21.12■□□□□ 0.97
CCDC117-201ENST00000249064 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.97
CCDC117-201ENST00000249064 MYT1Q01538 1121 aa20.87■□□□□ 0.93
CCDC117-201ENST00000249064 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
CCDC117-201ENST00000249064 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
CCDC117-201ENST00000249064 YTHDC1Q96MU7 727 aaKnown RBP20.73■□□□□ 0.91
CCDC117-201ENST00000249064 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
CCDC117-201ENST00000249064 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
CCDC117-201ENST00000249064 CENPBP07199 599 aaPredicted RBP20.68■□□□□ 0.9
CCDC117-201ENST00000249064 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
CCDC117-201ENST00000249064 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
CCDC117-201ENST00000249064 TRIM26Q12899 539 aaPredicted RBP20.58■□□□□ 0.88
CCDC117-201ENST00000249064 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
CCDC117-201ENST00000249064 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
CCDC117-201ENST00000249064 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
CCDC117-201ENST00000249064 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
CCDC117-201ENST00000249064 NEUROD1Q13562 356 aa20.27■□□□□ 0.83
CCDC117-201ENST00000249064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
CCDC117-201ENST00000249064 ABCC9O60706 1549 aa20.2■□□□□ 0.82
CCDC117-201ENST00000249064 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
CCDC117-201ENST00000249064 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
CCDC117-201ENST00000249064 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
CCDC117-201ENST00000249064 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.8
CCDC117-201ENST00000249064 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
CCDC117-201ENST00000249064 RSF1Q96T23 1441 aaPredicted RBP19.9■□□□□ 0.78
CCDC117-201ENST00000249064 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCDC117-201ENST00000249064 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
CCDC117-201ENST00000249064 APLP2Q06481 763 aa19.75■□□□□ 0.75
CCDC117-201ENST00000249064 BCANQ96GW7 911 aa19.73■□□□□ 0.75
CCDC117-201ENST00000249064 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
CCDC117-201ENST00000249064 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
CCDC117-201ENST00000249064 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
CCDC117-201ENST00000249064 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
CCDC117-201ENST00000249064 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
CCDC117-201ENST00000249064 NEFLP07196 543 aa19.46■□□□□ 0.71
CCDC117-201ENST00000249064 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
CCDC117-201ENST00000249064 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
CCDC117-201ENST00000249064 ITGAEP38570 1179 aa19.42■□□□□ 0.7
CCDC117-201ENST00000249064 MIER1Q8N108 512 aa19.42■□□□□ 0.7
CCDC117-201ENST00000249064 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
CCDC117-201ENST00000249064 ANP32EQ9BTT0 268 aa19.32■□□□□ 0.68
CCDC117-201ENST00000249064 WIZO95785 1651 aa19.27■□□□□ 0.68
CCDC117-201ENST00000249064 NACADO15069 1562 aa19.22■□□□□ 0.67
CCDC117-201ENST00000249064 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
CCDC117-201ENST00000249064 SOGA1O94964 1423 aa19.21■□□□□ 0.67
CCDC117-201ENST00000249064 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
CCDC117-201ENST00000249064 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
CCDC117-201ENST00000249064 FKBP8Q14318 412 aa19.14■□□□□ 0.65
CCDC117-201ENST00000249064 SUPT16HQ9Y5B9 1047 aaKnown RBP19.05■□□□□ 0.64
CCDC117-201ENST00000249064 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
CCDC117-201ENST00000249064 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
CCDC117-201ENST00000249064 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
CCDC117-201ENST00000249064 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
CCDC117-201ENST00000249064 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
CCDC117-201ENST00000249064 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
CCDC117-201ENST00000249064 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
CCDC117-201ENST00000249064 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
CCDC117-201ENST00000249064 CLIP1P30622 1438 aa18.93■□□□□ 0.62
CCDC117-201ENST00000249064 NBR1Q14596 966 aa18.92■□□□□ 0.62
CCDC117-201ENST00000249064 FAM50AQ14320 339 aaKnown RBP18.9■□□□□ 0.62
CCDC117-201ENST00000249064 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
CCDC117-201ENST00000249064 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
CCDC117-201ENST00000249064 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
CCDC117-201ENST00000249064 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
CCDC117-201ENST00000249064 CDK11AQ9UQ88 783 aaPredicted RBP18.84■□□□□ 0.61
CCDC117-201ENST00000249064 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.61
CCDC117-201ENST00000249064 RTN4Q9NQC3 1192 aaKnown RBP18.78■□□□□ 0.6
CCDC117-201ENST00000249064 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
CCDC117-201ENST00000249064 EEA1Q15075 1411 aa18.75■□□□□ 0.59
CCDC117-201ENST00000249064 RBM19Q9Y4C8 960 aaKnown RBP18.74■□□□□ 0.59
CCDC117-201ENST00000249064 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
CCDC117-201ENST00000249064 DDX10Q13206 875 aaKnown RBP18.72■□□□□ 0.59
CCDC117-201ENST00000249064 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
CCDC117-201ENST00000249064 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
CCDC117-201ENST00000249064 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
CCDC117-201ENST00000249064 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
CCDC117-201ENST00000249064 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
CCDC117-201ENST00000249064 PRKCSHP14314 528 aaPredicted RBP18.69■□□□□ 0.58
CCDC117-201ENST00000249064 CLSPNQ9HAW4 1339 aa18.68■□□□□ 0.58
CCDC117-201ENST00000249064 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
CCDC117-201ENST00000249064 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
CCDC117-201ENST00000249064 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
CCDC117-201ENST00000249064 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
CCDC117-201ENST00000249064 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.57
CCDC117-201ENST00000249064 ANP32CO43423 234 aa18.57■□□□□ 0.56
CCDC117-201ENST00000249064 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
CCDC117-201ENST00000249064 KCNH8Q96L42 1107 aa18.57■□□□□ 0.56
CCDC117-201ENST00000249064 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
CCDC117-201ENST00000249064 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
CCDC117-201ENST00000249064 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms