RNA–Protein interactions for RNA: ENST00000510688.5

NEK11-209, Transcript of NIMA related kinase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK11, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-209ENST00000510688 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
NEK11-209ENST00000510688 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
NEK11-209ENST00000510688 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
NEK11-209ENST00000510688 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
NEK11-209ENST00000510688 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
NEK11-209ENST00000510688 MYO15BQ96JP2 1530 aa21.86■■□□□ 1.09
NEK11-209ENST00000510688 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
NEK11-209ENST00000510688 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
NEK11-209ENST00000510688 HRCP23327 699 aa21.62■■□□□ 1.05
NEK11-209ENST00000510688 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
NEK11-209ENST00000510688 CCDC180Q9P1Z9 1646 aa21.5■■□□□ 1.03
NEK11-209ENST00000510688 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
NEK11-209ENST00000510688 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
NEK11-209ENST00000510688 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
NEK11-209ENST00000510688 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
NEK11-209ENST00000510688 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
NEK11-209ENST00000510688 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
NEK11-209ENST00000510688 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
NEK11-209ENST00000510688 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
NEK11-209ENST00000510688 ABCC9O60706 1549 aa20.67■□□□□ 0.9
NEK11-209ENST00000510688 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.89
NEK11-209ENST00000510688 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
NEK11-209ENST00000510688 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
NEK11-209ENST00000510688 ZEB1P37275 1124 aaPredicted RBP20.4■□□□□ 0.86
NEK11-209ENST00000510688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
NEK11-209ENST00000510688 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
NEK11-209ENST00000510688 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
NEK11-209ENST00000510688 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
NEK11-209ENST00000510688 WIZO95785 1651 aa20.17■□□□□ 0.82
NEK11-209ENST00000510688 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
NEK11-209ENST00000510688 NACADO15069 1562 aa19.97■□□□□ 0.79
NEK11-209ENST00000510688 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
NEK11-209ENST00000510688 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
NEK11-209ENST00000510688 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
NEK11-209ENST00000510688 DIEXFQ68CQ4 756 aaKnown RBP19.89■□□□□ 0.77
NEK11-209ENST00000510688 SOGA1O94964 1423 aa19.88■□□□□ 0.77
NEK11-209ENST00000510688 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
NEK11-209ENST00000510688 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
NEK11-209ENST00000510688 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
NEK11-209ENST00000510688 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
NEK11-209ENST00000510688 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
NEK11-209ENST00000510688 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
NEK11-209ENST00000510688 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
NEK11-209ENST00000510688 YTHDC1Q96MU7 727 aaKnown RBP19.76■□□□□ 0.75
NEK11-209ENST00000510688 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
NEK11-209ENST00000510688 EIF4G1Q04637 1599 aaKnown RBP19.75■□□□□ 0.75
NEK11-209ENST00000510688 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
NEK11-209ENST00000510688 PELP1Q8IZL8 1130 aaKnown RBP19.72■□□□□ 0.75
NEK11-209ENST00000510688 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
NEK11-209ENST00000510688 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.73
NEK11-209ENST00000510688 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
NEK11-209ENST00000510688 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
NEK11-209ENST00000510688 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
NEK11-209ENST00000510688 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
NEK11-209ENST00000510688 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
NEK11-209ENST00000510688 MIER1Q8N108 512 aa19.49■□□□□ 0.71
NEK11-209ENST00000510688 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
NEK11-209ENST00000510688 APLP2Q06481 763 aa19.43■□□□□ 0.7
NEK11-209ENST00000510688 CLIP1P30622 1438 aa19.4■□□□□ 0.7
NEK11-209ENST00000510688 EEA1Q15075 1411 aa19.4■□□□□ 0.7
NEK11-209ENST00000510688 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
NEK11-209ENST00000510688 SYNJ1O43426 1573 aa19.33■□□□□ 0.68
NEK11-209ENST00000510688 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
NEK11-209ENST00000510688 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
NEK11-209ENST00000510688 VPS8Q8N3P4 1428 aa19.24■□□□□ 0.67
NEK11-209ENST00000510688 ITGAEP38570 1179 aa19.23■□□□□ 0.67
NEK11-209ENST00000510688 BICRAQ9NZM4 1560 aa19.2■□□□□ 0.66
NEK11-209ENST00000510688 KANK4Q5T7N3 995 aaPredicted RBP19.19■□□□□ 0.66
NEK11-209ENST00000510688 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
NEK11-209ENST00000510688 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.66
NEK11-209ENST00000510688 KIF21BO75037 1637 aa19.12■□□□□ 0.65
NEK11-209ENST00000510688 DHX57Q6P158 1386 aaKnown RBP19.04■□□□□ 0.64
NEK11-209ENST00000510688 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
NEK11-209ENST00000510688 KCNH8Q96L42 1107 aa18.96■□□□□ 0.63
NEK11-209ENST00000510688 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
NEK11-209ENST00000510688 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
NEK11-209ENST00000510688 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
NEK11-209ENST00000510688 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
NEK11-209ENST00000510688 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
NEK11-209ENST00000510688 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
NEK11-209ENST00000510688 HIRIP3Q9BW71 556 aaPredicted RBP18.86■□□□□ 0.61
NEK11-209ENST00000510688 BCANQ96GW7 911 aa18.83■□□□□ 0.61
NEK11-209ENST00000510688 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.61
NEK11-209ENST00000510688 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
NEK11-209ENST00000510688 CUX1P39880 1505 aa18.81■□□□□ 0.6
NEK11-209ENST00000510688 SIN3AQ96ST3 1273 aa18.81■□□□□ 0.6
NEK11-209ENST00000510688 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
NEK11-209ENST00000510688 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
NEK11-209ENST00000510688 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.6
NEK11-209ENST00000510688 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
NEK11-209ENST00000510688 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.59
NEK11-209ENST00000510688 RRBP1Q9P2E9 1410 aaKnown RBP18.75■□□□□ 0.59
NEK11-209ENST00000510688 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
NEK11-209ENST00000510688 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
NEK11-209ENST00000510688 CUX2O14529 1486 aa18.69■□□□□ 0.58
NEK11-209ENST00000510688 MYT1Q01538 1121 aa18.65■□□□□ 0.58
NEK11-209ENST00000510688 IGF1RP08069 1367 aa18.64■□□□□ 0.58
NEK11-209ENST00000510688 PHLDB1Q86UU1 1377 aa18.64■□□□□ 0.58
NEK11-209ENST00000510688 TSHZ2Q9NRE2 1034 aa18.64■□□□□ 0.57
NEK11-209ENST00000510688 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms