RNA–Protein interactions for RNA: ENST00000240132.7

CHRNA2-201, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CHRNA2, Length 1,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-201ENST00000240132 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
CHRNA2-201ENST00000240132 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
CHRNA2-201ENST00000240132 ABCC9O60706 1549 aa28.46■■■□□ 2.15
CHRNA2-201ENST00000240132 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
CHRNA2-201ENST00000240132 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
CHRNA2-201ENST00000240132 NACADO15069 1562 aa27.34■■□□□ 1.97
CHRNA2-201ENST00000240132 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
CHRNA2-201ENST00000240132 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
CHRNA2-201ENST00000240132 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
CHRNA2-201ENST00000240132 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
CHRNA2-201ENST00000240132 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.86
CHRNA2-201ENST00000240132 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
CHRNA2-201ENST00000240132 SCRIBQ14160 1630 aa26.51■■□□□ 1.84
CHRNA2-201ENST00000240132 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
CHRNA2-201ENST00000240132 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
CHRNA2-201ENST00000240132 EIF4G1Q04637 1599 aaKnown RBP25.85■■□□□ 1.73
CHRNA2-201ENST00000240132 CC2D2AQ9P2K1 1620 aa25.73■■□□□ 1.71
CHRNA2-201ENST00000240132 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.68
CHRNA2-201ENST00000240132 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
CHRNA2-201ENST00000240132 BAZ1AQ9NRL2 1556 aaPredicted RBP25.36■■□□□ 1.65
CHRNA2-201ENST00000240132 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
CHRNA2-201ENST00000240132 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
CHRNA2-201ENST00000240132 MROH2BQ7Z745 1585 aa25.24■■□□□ 1.63
CHRNA2-201ENST00000240132 SMARCA2P51531 1590 aa25.21■■□□□ 1.63
CHRNA2-201ENST00000240132 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
CHRNA2-201ENST00000240132 HMGXB3Q12766 1538 aa25.1■■□□□ 1.61
CHRNA2-201ENST00000240132 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
CHRNA2-201ENST00000240132 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
CHRNA2-201ENST00000240132 WIZO95785 1651 aa24.94■■□□□ 1.58
CHRNA2-201ENST00000240132 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
CHRNA2-201ENST00000240132 NESP48681 1621 aa24.64■■□□□ 1.54
CHRNA2-201ENST00000240132 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
CHRNA2-201ENST00000240132 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
CHRNA2-201ENST00000240132 ERCC6Q03468 1493 aa24.52■■□□□ 1.51
CHRNA2-201ENST00000240132 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
CHRNA2-201ENST00000240132 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
CHRNA2-201ENST00000240132 CFTRP13569 1480 aa24.39■■□□□ 1.5
CHRNA2-201ENST00000240132 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
CHRNA2-201ENST00000240132 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
CHRNA2-201ENST00000240132 CUX2O14529 1486 aa24.26■■□□□ 1.47
CHRNA2-201ENST00000240132 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
CHRNA2-201ENST00000240132 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
CHRNA2-201ENST00000240132 CEP164Q9UPV0 1460 aa24.18■■□□□ 1.46
CHRNA2-201ENST00000240132 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
CHRNA2-201ENST00000240132 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
CHRNA2-201ENST00000240132 WDR62O43379 1518 aa24.06■■□□□ 1.44
CHRNA2-201ENST00000240132 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
CHRNA2-201ENST00000240132 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
CHRNA2-201ENST00000240132 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
CHRNA2-201ENST00000240132 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
CHRNA2-201ENST00000240132 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
CHRNA2-201ENST00000240132 CUX1P39880 1505 aa23.66■■□□□ 1.38
CHRNA2-201ENST00000240132 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
CHRNA2-201ENST00000240132 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
CHRNA2-201ENST00000240132 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
CHRNA2-201ENST00000240132 SOGA1O94964 1423 aa23.58■■□□□ 1.36
CHRNA2-201ENST00000240132 DNAJC5Q9H3Z4 198 aa23.57■■□□□ 1.36
CHRNA2-201ENST00000240132 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
CHRNA2-201ENST00000240132 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
CHRNA2-201ENST00000240132 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
CHRNA2-201ENST00000240132 AQRO60306 1485 aaKnown RBP eCLIP23.48■■□□□ 1.35
CHRNA2-201ENST00000240132 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
CHRNA2-201ENST00000240132 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
CHRNA2-201ENST00000240132 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
CHRNA2-201ENST00000240132 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
CHRNA2-201ENST00000240132 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
CHRNA2-201ENST00000240132 ABCA10Q8WWZ4 1543 aa23.37■■□□□ 1.33
CHRNA2-201ENST00000240132 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
CHRNA2-201ENST00000240132 OSCARQ8IYS5 282 aa23.33■■□□□ 1.32
CHRNA2-201ENST00000240132 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
CHRNA2-201ENST00000240132 GRIN2BQ13224 1484 aa23.27■■□□□ 1.32
CHRNA2-201ENST00000240132 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
CHRNA2-201ENST00000240132 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
CHRNA2-201ENST00000240132 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
CHRNA2-201ENST00000240132 FBLN2P98095 1184 aa23.2■■□□□ 1.3
CHRNA2-201ENST00000240132 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
CHRNA2-201ENST00000240132 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CHRNA2-201ENST00000240132 CHD1O14646 1710 aa23.13■■□□□ 1.29
CHRNA2-201ENST00000240132 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
CHRNA2-201ENST00000240132 ERICH3Q5RHP9 1530 aa23.07■■□□□ 1.28
CHRNA2-201ENST00000240132 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
CHRNA2-201ENST00000240132 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
CHRNA2-201ENST00000240132 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
CHRNA2-201ENST00000240132 ADAMTS12P58397 1594 aa23■■□□□ 1.27
CHRNA2-201ENST00000240132 IGF1RP08069 1367 aa22.99■■□□□ 1.27
CHRNA2-201ENST00000240132 GRIN2AQ12879 1464 aa22.97■■□□□ 1.27
CHRNA2-201ENST00000240132 CLASP1Q7Z460 1538 aa22.92■■□□□ 1.26
CHRNA2-201ENST00000240132 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
CHRNA2-201ENST00000240132 NUP160Q12769 1436 aa22.88■■□□□ 1.25
CHRNA2-201ENST00000240132 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
CHRNA2-201ENST00000240132 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
CHRNA2-201ENST00000240132 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
CHRNA2-201ENST00000240132 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
CHRNA2-201ENST00000240132 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
CHRNA2-201ENST00000240132 CUL7Q14999 1698 aa22.83■■□□□ 1.25
CHRNA2-201ENST00000240132 CARMIL1Q5VZK9 1371 aa22.83■■□□□ 1.25
CHRNA2-201ENST00000240132 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.23
CHRNA2-201ENST00000240132 CYB5RLQ6IPT4 315 aa22.74■■□□□ 1.23
CHRNA2-201ENST00000240132 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
CHRNA2-201ENST00000240132 JPH4Q96JJ6 628 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms