RNA–Protein interactions for RNA: ENST00000341183.9

MKNK1-201, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 5 BASIC

Gene MKNK1, Length 2,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-201ENST00000341183 NISCHQ9Y2I1 1504 aa29.47■■■□□ 2.31
MKNK1-201ENST00000341183 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
MKNK1-201ENST00000341183 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
MKNK1-201ENST00000341183 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
MKNK1-201ENST00000341183 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
MKNK1-201ENST00000341183 ABCC9O60706 1549 aa24.28■■□□□ 1.48
MKNK1-201ENST00000341183 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
MKNK1-201ENST00000341183 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
MKNK1-201ENST00000341183 NACADO15069 1562 aa23.94■■□□□ 1.42
MKNK1-201ENST00000341183 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
MKNK1-201ENST00000341183 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
MKNK1-201ENST00000341183 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
MKNK1-201ENST00000341183 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
MKNK1-201ENST00000341183 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
MKNK1-201ENST00000341183 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.26
MKNK1-201ENST00000341183 PABPN1Q86U42 306 aaKnown RBP eCLIP22.89■■□□□ 1.25
MKNK1-201ENST00000341183 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
MKNK1-201ENST00000341183 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
MKNK1-201ENST00000341183 BAZ1AQ9NRL2 1556 aaPredicted RBP22.76■■□□□ 1.23
MKNK1-201ENST00000341183 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
MKNK1-201ENST00000341183 WIZO95785 1651 aa22.58■■□□□ 1.21
MKNK1-201ENST00000341183 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
MKNK1-201ENST00000341183 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
MKNK1-201ENST00000341183 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
MKNK1-201ENST00000341183 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
MKNK1-201ENST00000341183 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
MKNK1-201ENST00000341183 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
MKNK1-201ENST00000341183 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
MKNK1-201ENST00000341183 CCDC88BA6NC98 1476 aa22.11■■□□□ 1.13
MKNK1-201ENST00000341183 NCAPD3P42695 1498 aa22.1■■□□□ 1.13
MKNK1-201ENST00000341183 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
MKNK1-201ENST00000341183 CC2D2AQ9P2K1 1620 aa21.99■■□□□ 1.11
MKNK1-201ENST00000341183 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
MKNK1-201ENST00000341183 HRCP23327 699 aa21.72■■□□□ 1.07
MKNK1-201ENST00000341183 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
MKNK1-201ENST00000341183 CFTRP13569 1480 aa21.61■■□□□ 1.05
MKNK1-201ENST00000341183 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
MKNK1-201ENST00000341183 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.03
MKNK1-201ENST00000341183 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
MKNK1-201ENST00000341183 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
MKNK1-201ENST00000341183 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
MKNK1-201ENST00000341183 DNAJC5BQ9UF47 199 aa21.42■■□□□ 1.02
MKNK1-201ENST00000341183 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
MKNK1-201ENST00000341183 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
MKNK1-201ENST00000341183 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
MKNK1-201ENST00000341183 NESP48681 1621 aa21.33■■□□□ 1
MKNK1-201ENST00000341183 FAM9AQ8IZU1 332 aaPredicted RBP21.31■■□□□ 1
MKNK1-201ENST00000341183 CUX1P39880 1505 aa21.29■■□□□ 1
MKNK1-201ENST00000341183 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
MKNK1-201ENST00000341183 LOC105371045A0A1W2PR82 267 aa21.26■□□□□ 0.99
MKNK1-201ENST00000341183 SOGA1O94964 1423 aa21.24■□□□□ 0.99
MKNK1-201ENST00000341183 EEA1Q15075 1411 aa21.22■□□□□ 0.99
MKNK1-201ENST00000341183 PPARGC1BQ86YN6 1023 aaKnown RBP21.21■□□□□ 0.99
MKNK1-201ENST00000341183 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
MKNK1-201ENST00000341183 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
MKNK1-201ENST00000341183 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
MKNK1-201ENST00000341183 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
MKNK1-201ENST00000341183 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
MKNK1-201ENST00000341183 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.96
MKNK1-201ENST00000341183 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
MKNK1-201ENST00000341183 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
MKNK1-201ENST00000341183 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
MKNK1-201ENST00000341183 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
MKNK1-201ENST00000341183 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
MKNK1-201ENST00000341183 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
MKNK1-201ENST00000341183 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
MKNK1-201ENST00000341183 KIF21BO75037 1637 aa20.95■□□□□ 0.94
MKNK1-201ENST00000341183 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
MKNK1-201ENST00000341183 CUX2O14529 1486 aa20.91■□□□□ 0.94
MKNK1-201ENST00000341183 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
MKNK1-201ENST00000341183 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
MKNK1-201ENST00000341183 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
MKNK1-201ENST00000341183 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
MKNK1-201ENST00000341183 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
MKNK1-201ENST00000341183 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
MKNK1-201ENST00000341183 RAPGEF2Q9Y4G8 1499 aa20.82■□□□□ 0.92
MKNK1-201ENST00000341183 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
MKNK1-201ENST00000341183 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
MKNK1-201ENST00000341183 WDR62O43379 1518 aa20.8■□□□□ 0.92
MKNK1-201ENST00000341183 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
MKNK1-201ENST00000341183 IGF1RP08069 1367 aa20.79■□□□□ 0.92
MKNK1-201ENST00000341183 MYT1Q01538 1121 aa20.76■□□□□ 0.91
MKNK1-201ENST00000341183 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
MKNK1-201ENST00000341183 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
MKNK1-201ENST00000341183 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
MKNK1-201ENST00000341183 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
MKNK1-201ENST00000341183 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
MKNK1-201ENST00000341183 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
MKNK1-201ENST00000341183 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
MKNK1-201ENST00000341183 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
MKNK1-201ENST00000341183 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
MKNK1-201ENST00000341183 CUL7Q14999 1698 aa20.64■□□□□ 0.89
MKNK1-201ENST00000341183 CLIP1P30622 1438 aa20.58■□□□□ 0.88
MKNK1-201ENST00000341183 PBRM1Q86U86 1689 aa20.55■□□□□ 0.88
MKNK1-201ENST00000341183 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.882e-6■■■■■ 35.2
MKNK1-201ENST00000341183 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
MKNK1-201ENST00000341183 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
MKNK1-201ENST00000341183 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
MKNK1-201ENST00000341183 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
MKNK1-201ENST00000341183 ADAMTS12P58397 1594 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms