RNA–Protein interactions for RNA: ENST00000409366.5

DYSF-203, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-203ENST00000409366 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
DYSF-203ENST00000409366 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
DYSF-203ENST00000409366 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
DYSF-203ENST00000409366 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.92
DYSF-203ENST00000409366 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
DYSF-203ENST00000409366 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
DYSF-203ENST00000409366 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
DYSF-203ENST00000409366 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
DYSF-203ENST00000409366 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
DYSF-203ENST00000409366 HRCP23327 699 aa19.97■□□□□ 0.79
DYSF-203ENST00000409366 MYT1Q01538 1121 aa19.91■□□□□ 0.78
DYSF-203ENST00000409366 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
DYSF-203ENST00000409366 APLP2Q06481 763 aa19.79■□□□□ 0.76
DYSF-203ENST00000409366 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
DYSF-203ENST00000409366 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
DYSF-203ENST00000409366 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
DYSF-203ENST00000409366 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
DYSF-203ENST00000409366 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
DYSF-203ENST00000409366 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
DYSF-203ENST00000409366 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
DYSF-203ENST00000409366 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
DYSF-203ENST00000409366 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
DYSF-203ENST00000409366 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
DYSF-203ENST00000409366 NEFLP07196 543 aa19.16■□□□□ 0.66
DYSF-203ENST00000409366 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
DYSF-203ENST00000409366 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
DYSF-203ENST00000409366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
DYSF-203ENST00000409366 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
DYSF-203ENST00000409366 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
DYSF-203ENST00000409366 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
DYSF-203ENST00000409366 ACIN1Q9UKV3 1341 aaKnown RBP18.72■□□□□ 0.59
DYSF-203ENST00000409366 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
DYSF-203ENST00000409366 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
DYSF-203ENST00000409366 ITGAEP38570 1179 aa18.52■□□□□ 0.56
DYSF-203ENST00000409366 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
DYSF-203ENST00000409366 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
DYSF-203ENST00000409366 DAXXQ9UER7 740 aaPredicted RBP18.34■□□□□ 0.53
DYSF-203ENST00000409366 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
DYSF-203ENST00000409366 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
DYSF-203ENST00000409366 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.51
DYSF-203ENST00000409366 BCANQ96GW7 911 aa18.27■□□□□ 0.51
DYSF-203ENST00000409366 ANP32CO43423 234 aa18.19■□□□□ 0.5
DYSF-203ENST00000409366 CDK11AQ9UQ88 783 aaPredicted RBP18.18■□□□□ 0.5
DYSF-203ENST00000409366 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
DYSF-203ENST00000409366 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
DYSF-203ENST00000409366 POLR3GLQ9BT43 218 aa18.17■□□□□ 0.5
DYSF-203ENST00000409366 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
DYSF-203ENST00000409366 CCDC180Q9P1Z9 1646 aa18.01■□□□□ 0.47
DYSF-203ENST00000409366 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
DYSF-203ENST00000409366 FKBP8Q14318 412 aa17.95■□□□□ 0.46
DYSF-203ENST00000409366 MIER1Q8N108 512 aa17.93■□□□□ 0.46
DYSF-203ENST00000409366 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
DYSF-203ENST00000409366 MYT1LQ9UL68 1186 aa17.92■□□□□ 0.46
DYSF-203ENST00000409366 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
DYSF-203ENST00000409366 ABCC9O60706 1549 aa17.83■□□□□ 0.45
DYSF-203ENST00000409366 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
DYSF-203ENST00000409366 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
DYSF-203ENST00000409366 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
DYSF-203ENST00000409366 TONSLQ96HA7 1378 aa17.71■□□□□ 0.43
DYSF-203ENST00000409366 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
DYSF-203ENST00000409366 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
DYSF-203ENST00000409366 EEA1Q15075 1411 aa17.68■□□□□ 0.42
DYSF-203ENST00000409366 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
DYSF-203ENST00000409366 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
DYSF-203ENST00000409366 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
DYSF-203ENST00000409366 CLIP1P30622 1438 aa17.64■□□□□ 0.41
DYSF-203ENST00000409366 TNIKQ9UKE5 1360 aa17.58■□□□□ 0.41
DYSF-203ENST00000409366 NPM2Q86SE8 214 aaKnown RBP17.56■□□□□ 0.4
DYSF-203ENST00000409366 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
DYSF-203ENST00000409366 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
DYSF-203ENST00000409366 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
DYSF-203ENST00000409366 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
DYSF-203ENST00000409366 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.4
DYSF-203ENST00000409366 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.39
DYSF-203ENST00000409366 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
DYSF-203ENST00000409366 NBR1Q14596 966 aa17.46■□□□□ 0.38
DYSF-203ENST00000409366 MRS2Q9HD23 443 aa17.46■□□□□ 0.38
DYSF-203ENST00000409366 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
DYSF-203ENST00000409366 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
DYSF-203ENST00000409366 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
DYSF-203ENST00000409366 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
DYSF-203ENST00000409366 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
DYSF-203ENST00000409366 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
DYSF-203ENST00000409366 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
DYSF-203ENST00000409366 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
DYSF-203ENST00000409366 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.37
DYSF-203ENST00000409366 GLIPR1L2Q4G1C9 344 aa17.31■□□□□ 0.36
DYSF-203ENST00000409366 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
DYSF-203ENST00000409366 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
DYSF-203ENST00000409366 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
DYSF-203ENST00000409366 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
DYSF-203ENST00000409366 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
DYSF-203ENST00000409366 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
DYSF-203ENST00000409366 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
DYSF-203ENST00000409366 CHIC2Q9UKJ5 165 aa17.24■□□□□ 0.35
DYSF-203ENST00000409366 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
DYSF-203ENST00000409366 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
DYSF-203ENST00000409366 ANP32BQ92688 251 aaKnown RBP17.23■□□□□ 0.35
DYSF-203ENST00000409366 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
DYSF-203ENST00000409366 RBM19Q9Y4C8 960 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms