RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
DYSF-209ENST00000410041 DCAF8L2P0C7V8 631 aa21.49■■□□□ 1.03
DYSF-209ENST00000410041 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
DYSF-209ENST00000410041 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
DYSF-209ENST00000410041 PCGF6Q9BYE7 350 aa20.48■□□□□ 0.87
DYSF-209ENST00000410041 PELP1Q8IZL8 1130 aaKnown RBP20.31■□□□□ 0.84
DYSF-209ENST00000410041 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
DYSF-209ENST00000410041 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
DYSF-209ENST00000410041 CENPBP07199 599 aaPredicted RBP20.02■□□□□ 0.8
DYSF-209ENST00000410041 HRCP23327 699 aa19.99■□□□□ 0.79
DYSF-209ENST00000410041 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
DYSF-209ENST00000410041 MYT1Q01538 1121 aa19.89■□□□□ 0.77
DYSF-209ENST00000410041 APLP2Q06481 763 aa19.84■□□□□ 0.77
DYSF-209ENST00000410041 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.75
DYSF-209ENST00000410041 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
DYSF-209ENST00000410041 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
DYSF-209ENST00000410041 TTBK1Q5TCY1 1321 aaPredicted RBP19.66■□□□□ 0.74
DYSF-209ENST00000410041 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
DYSF-209ENST00000410041 PPARGC1BQ86YN6 1023 aaKnown RBP19.44■□□□□ 0.7
DYSF-209ENST00000410041 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
DYSF-209ENST00000410041 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
DYSF-209ENST00000410041 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
DYSF-209ENST00000410041 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.67
DYSF-209ENST00000410041 NEFLP07196 543 aa19.22■□□□□ 0.67
DYSF-209ENST00000410041 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
DYSF-209ENST00000410041 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
DYSF-209ENST00000410041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
DYSF-209ENST00000410041 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
DYSF-209ENST00000410041 ATP1B4Q9UN42 357 aaPredicted RBP18.83■□□□□ 0.61
DYSF-209ENST00000410041 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
DYSF-209ENST00000410041 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
DYSF-209ENST00000410041 ITGAEP38570 1179 aa18.62■□□□□ 0.57
DYSF-209ENST00000410041 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
DYSF-209ENST00000410041 ZNF316A6NFI3 1004 aaPredicted RBP18.58■□□□□ 0.57
DYSF-209ENST00000410041 DAXXQ9UER7 740 aaPredicted RBP18.4■□□□□ 0.54
DYSF-209ENST00000410041 SCAF1Q9H7N4 1312 aaKnown RBP18.39■□□□□ 0.53
DYSF-209ENST00000410041 RTL5Q5HYW3 569 aaPredicted RBP18.37■□□□□ 0.53
DYSF-209ENST00000410041 BCANQ96GW7 911 aa18.37■□□□□ 0.53
DYSF-209ENST00000410041 NEUROD1Q13562 356 aa18.34■□□□□ 0.53
DYSF-209ENST00000410041 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.52
DYSF-209ENST00000410041 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
DYSF-209ENST00000410041 ANP32CO43423 234 aa18.23■□□□□ 0.51
DYSF-209ENST00000410041 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
DYSF-209ENST00000410041 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
DYSF-209ENST00000410041 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
DYSF-209ENST00000410041 FAM50AQ14320 339 aaKnown RBP18.18■□□□□ 0.5
DYSF-209ENST00000410041 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
DYSF-209ENST00000410041 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
DYSF-209ENST00000410041 FKBP8Q14318 412 aa18.01■□□□□ 0.47
DYSF-209ENST00000410041 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
DYSF-209ENST00000410041 MIER1Q8N108 512 aa17.97■□□□□ 0.47
DYSF-209ENST00000410041 CCDC180Q9P1Z9 1646 aa17.96■□□□□ 0.47
DYSF-209ENST00000410041 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
DYSF-209ENST00000410041 ANP32AP39687 249 aaKnown RBP17.89■□□□□ 0.45
DYSF-209ENST00000410041 ABCC9O60706 1549 aa17.86■□□□□ 0.45
DYSF-209ENST00000410041 DDX10Q13206 875 aaKnown RBP17.82■□□□□ 0.44
DYSF-209ENST00000410041 PABPN1Q86U42 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
DYSF-209ENST00000410041 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
DYSF-209ENST00000410041 ZNF326Q5BKZ1 582 aaKnown RBP17.75■□□□□ 0.43
DYSF-209ENST00000410041 ANP32EQ9BTT0 268 aa17.73■□□□□ 0.43
DYSF-209ENST00000410041 TONSLQ96HA7 1378 aa17.73■□□□□ 0.43
DYSF-209ENST00000410041 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
DYSF-209ENST00000410041 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
DYSF-209ENST00000410041 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
DYSF-209ENST00000410041 CEP162Q5TB80 1403 aa17.65■□□□□ 0.42
DYSF-209ENST00000410041 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
DYSF-209ENST00000410041 CLIP1P30622 1438 aa17.64■□□□□ 0.41
DYSF-209ENST00000410041 EEA1Q15075 1411 aa17.62■□□□□ 0.41
DYSF-209ENST00000410041 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
DYSF-209ENST00000410041 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
DYSF-209ENST00000410041 ZBTB47Q9UFB7 747 aaPredicted RBP17.57■□□□□ 0.4
DYSF-209ENST00000410041 CCDC136Q96JN2 1154 aa17.56■□□□□ 0.4
DYSF-209ENST00000410041 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
DYSF-209ENST00000410041 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
DYSF-209ENST00000410041 NBR1Q14596 966 aa17.54■□□□□ 0.4
DYSF-209ENST00000410041 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
DYSF-209ENST00000410041 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
DYSF-209ENST00000410041 CANXP27824 592 aaKnown RBP17.51■□□□□ 0.39
DYSF-209ENST00000410041 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
DYSF-209ENST00000410041 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
DYSF-209ENST00000410041 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
DYSF-209ENST00000410041 TMC1Q8TDI8 760 aa17.4■□□□□ 0.38
DYSF-209ENST00000410041 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
DYSF-209ENST00000410041 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
DYSF-209ENST00000410041 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
DYSF-209ENST00000410041 GLIPR1L2Q4G1C9 344 aa17.34■□□□□ 0.37
DYSF-209ENST00000410041 RB1CC1Q8TDY2 1594 aa17.34■□□□□ 0.37
DYSF-209ENST00000410041 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.37
DYSF-209ENST00000410041 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
DYSF-209ENST00000410041 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
DYSF-209ENST00000410041 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
DYSF-209ENST00000410041 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
DYSF-209ENST00000410041 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
DYSF-209ENST00000410041 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
DYSF-209ENST00000410041 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.28■□□□□ 0.36
DYSF-209ENST00000410041 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
DYSF-209ENST00000410041 ANP32BQ92688 251 aaKnown RBP17.27■□□□□ 0.36
DYSF-209ENST00000410041 RBM19Q9Y4C8 960 aaKnown RBP17.26■□□□□ 0.35
DYSF-209ENST00000410041 DDRGK1Q96HY6 314 aa17.25■□□□□ 0.35
DYSF-209ENST00000410041 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms