RNA–Protein interactions for RNA: ENST00000616959.4

CPEB1-212, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2 BASIC

Gene CPEB1, Length 2,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-212ENST00000616959 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
CPEB1-212ENST00000616959 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
CPEB1-212ENST00000616959 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
CPEB1-212ENST00000616959 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
CPEB1-212ENST00000616959 ABCC9O60706 1549 aa24.71■■□□□ 1.55
CPEB1-212ENST00000616959 DCAF1Q9Y4B6 1507 aa24.49■■□□□ 1.51
CPEB1-212ENST00000616959 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
CPEB1-212ENST00000616959 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
CPEB1-212ENST00000616959 NACADO15069 1562 aa24.15■■□□□ 1.46
CPEB1-212ENST00000616959 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
CPEB1-212ENST00000616959 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
CPEB1-212ENST00000616959 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
CPEB1-212ENST00000616959 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
CPEB1-212ENST00000616959 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.32
CPEB1-212ENST00000616959 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
CPEB1-212ENST00000616959 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
CPEB1-212ENST00000616959 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
CPEB1-212ENST00000616959 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
CPEB1-212ENST00000616959 BAZ1AQ9NRL2 1556 aaPredicted RBP22.94■■□□□ 1.26
CPEB1-212ENST00000616959 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
CPEB1-212ENST00000616959 WIZO95785 1651 aa22.83■■□□□ 1.24
CPEB1-212ENST00000616959 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
CPEB1-212ENST00000616959 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
CPEB1-212ENST00000616959 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
CPEB1-212ENST00000616959 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
CPEB1-212ENST00000616959 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
CPEB1-212ENST00000616959 BAZ1BQ9UIG0 1483 aaKnown RBP22.4■■□□□ 1.18
CPEB1-212ENST00000616959 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
CPEB1-212ENST00000616959 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
CPEB1-212ENST00000616959 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
CPEB1-212ENST00000616959 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
CPEB1-212ENST00000616959 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
CPEB1-212ENST00000616959 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
CPEB1-212ENST00000616959 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
CPEB1-212ENST00000616959 ABCC8Q09428 1581 aa21.89■■□□□ 1.1
CPEB1-212ENST00000616959 CFTRP13569 1480 aa21.81■■□□□ 1.08
CPEB1-212ENST00000616959 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
CPEB1-212ENST00000616959 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
CPEB1-212ENST00000616959 NESP48681 1621 aa21.68■■□□□ 1.06
CPEB1-212ENST00000616959 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
CPEB1-212ENST00000616959 SYNJ1O43426 1573 aa21.64■■□□□ 1.06
CPEB1-212ENST00000616959 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
CPEB1-212ENST00000616959 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
CPEB1-212ENST00000616959 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
CPEB1-212ENST00000616959 CUX1P39880 1505 aa21.51■■□□□ 1.03
CPEB1-212ENST00000616959 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
CPEB1-212ENST00000616959 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
CPEB1-212ENST00000616959 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
CPEB1-212ENST00000616959 SOGA1O94964 1423 aa21.46■■□□□ 1.03
CPEB1-212ENST00000616959 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
CPEB1-212ENST00000616959 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
CPEB1-212ENST00000616959 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
CPEB1-212ENST00000616959 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
CPEB1-212ENST00000616959 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
CPEB1-212ENST00000616959 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
CPEB1-212ENST00000616959 TOPBP1Q92547 1522 aa21.29■■□□□ 1
CPEB1-212ENST00000616959 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
CPEB1-212ENST00000616959 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
CPEB1-212ENST00000616959 EEA1Q15075 1411 aa21.27■□□□□ 0.99
CPEB1-212ENST00000616959 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
CPEB1-212ENST00000616959 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
CPEB1-212ENST00000616959 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
CPEB1-212ENST00000616959 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
CPEB1-212ENST00000616959 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
CPEB1-212ENST00000616959 CUX2O14529 1486 aa21.15■□□□□ 0.98
CPEB1-212ENST00000616959 KIF27Q86VH2 1401 aa21.14■□□□□ 0.97
CPEB1-212ENST00000616959 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
CPEB1-212ENST00000616959 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
CPEB1-212ENST00000616959 WDR62O43379 1518 aa21.04■□□□□ 0.96
CPEB1-212ENST00000616959 KIF21BO75037 1637 aa21.04■□□□□ 0.96
CPEB1-212ENST00000616959 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
CPEB1-212ENST00000616959 THOC2Q8NI27 1593 aaKnown RBP21.01■□□□□ 0.95
CPEB1-212ENST00000616959 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
CPEB1-212ENST00000616959 WDR97A6NE52 1622 aa21■□□□□ 0.95
CPEB1-212ENST00000616959 IGF1RP08069 1367 aa20.98■□□□□ 0.95
CPEB1-212ENST00000616959 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
CPEB1-212ENST00000616959 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
CPEB1-212ENST00000616959 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
CPEB1-212ENST00000616959 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
CPEB1-212ENST00000616959 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
CPEB1-212ENST00000616959 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
CPEB1-212ENST00000616959 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
CPEB1-212ENST00000616959 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
CPEB1-212ENST00000616959 CARMIL1Q5VZK9 1371 aa20.87■□□□□ 0.93
CPEB1-212ENST00000616959 IFT140Q96RY7 1462 aa20.87■□□□□ 0.93
CPEB1-212ENST00000616959 AQRO60306 1485 aaKnown RBP eCLIP20.85■□□□□ 0.931e-6■■■■□ 20
CPEB1-212ENST00000616959 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
CPEB1-212ENST00000616959 RANGAP1P46060 587 aaPredicted RBP20.81■□□□□ 0.92
CPEB1-212ENST00000616959 CUL7Q14999 1698 aa20.78■□□□□ 0.92
CPEB1-212ENST00000616959 PBRM1Q86U86 1689 aa20.77■□□□□ 0.91
CPEB1-212ENST00000616959 EIF4G3O43432 1585 aaKnown RBP20.73■□□□□ 0.91
CPEB1-212ENST00000616959 CLIP1P30622 1438 aa20.72■□□□□ 0.91
CPEB1-212ENST00000616959 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
CPEB1-212ENST00000616959 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
CPEB1-212ENST00000616959 SNAPC4Q5SXM2 1469 aa20.63■□□□□ 0.89
CPEB1-212ENST00000616959 FHAD1B1AJZ9 1412 aa20.63■□□□□ 0.89
CPEB1-212ENST00000616959 CTTNBP2Q8WZ74 1663 aa20.57■□□□□ 0.88
CPEB1-212ENST00000616959 PPARGC1BQ86YN6 1023 aaKnown RBP20.55■□□□□ 0.88
CPEB1-212ENST00000616959 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
CPEB1-212ENST00000616959 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms