RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
PRKXP1-201ENST00000561423 ABCC9O60706 1549 aa32.31■■■□□ 2.76
PRKXP1-201ENST00000561423 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
PRKXP1-201ENST00000561423 RB1CC1Q8TDY2 1594 aa30.65■■■□□ 2.5
PRKXP1-201ENST00000561423 DNAJC5BQ9UF47 199 aa30.45■■■□□ 2.47
PRKXP1-201ENST00000561423 NACADO15069 1562 aa30.41■■■□□ 2.46
PRKXP1-201ENST00000561423 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
PRKXP1-201ENST00000561423 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
PRKXP1-201ENST00000561423 MYO15BQ96JP2 1530 aa29.97■■■□□ 2.39
PRKXP1-201ENST00000561423 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
PRKXP1-201ENST00000561423 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
PRKXP1-201ENST00000561423 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
PRKXP1-201ENST00000561423 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
PRKXP1-201ENST00000561423 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
PRKXP1-201ENST00000561423 SCRIBQ14160 1630 aa29.31■■■□□ 2.28
PRKXP1-201ENST00000561423 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
PRKXP1-201ENST00000561423 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
PRKXP1-201ENST00000561423 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
PRKXP1-201ENST00000561423 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
PRKXP1-201ENST00000561423 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
PRKXP1-201ENST00000561423 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
PRKXP1-201ENST00000561423 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
PRKXP1-201ENST00000561423 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
PRKXP1-201ENST00000561423 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
PRKXP1-201ENST00000561423 CUX2O14529 1486 aa27.88■■■□□ 2.05
PRKXP1-201ENST00000561423 ERCC6Q03468 1493 aa27.88■■■□□ 2.05
PRKXP1-201ENST00000561423 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
PRKXP1-201ENST00000561423 NESP48681 1621 aa27.73■■■□□ 2.03
PRKXP1-201ENST00000561423 BAZ1BQ9UIG0 1483 aaKnown RBP27.72■■■□□ 2.03
PRKXP1-201ENST00000561423 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
PRKXP1-201ENST00000561423 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
PRKXP1-201ENST00000561423 LAMC3Q9Y6N6 1575 aa27.47■■□□□ 1.99
PRKXP1-201ENST00000561423 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
PRKXP1-201ENST00000561423 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.96
PRKXP1-201ENST00000561423 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
PRKXP1-201ENST00000561423 CADPSQ9ULU8 1353 aa27.25■■□□□ 1.95
PRKXP1-201ENST00000561423 WIZO95785 1651 aa27.22■■□□□ 1.95
PRKXP1-201ENST00000561423 MRC2Q9UBG0 1479 aa27.12■■□□□ 1.93
PRKXP1-201ENST00000561423 WDR62O43379 1518 aa27.06■■□□□ 1.92
PRKXP1-201ENST00000561423 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
PRKXP1-201ENST00000561423 CEP164Q9UPV0 1460 aa26.97■■□□□ 1.91
PRKXP1-201ENST00000561423 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
PRKXP1-201ENST00000561423 CFTRP13569 1480 aa26.92■■□□□ 1.9
PRKXP1-201ENST00000561423 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
PRKXP1-201ENST00000561423 URB2Q14146 1524 aaKnown RBP26.75■■□□□ 1.87
PRKXP1-201ENST00000561423 TRIM41Q8WV44 630 aa26.72■■□□□ 1.87
PRKXP1-201ENST00000561423 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
PRKXP1-201ENST00000561423 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
PRKXP1-201ENST00000561423 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
PRKXP1-201ENST00000561423 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
PRKXP1-201ENST00000561423 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
PRKXP1-201ENST00000561423 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
PRKXP1-201ENST00000561423 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
PRKXP1-201ENST00000561423 DNMBPQ6XZF7 1577 aa26.3■■□□□ 1.8
PRKXP1-201ENST00000561423 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
PRKXP1-201ENST00000561423 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
PRKXP1-201ENST00000561423 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
PRKXP1-201ENST00000561423 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
PRKXP1-201ENST00000561423 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
PRKXP1-201ENST00000561423 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.78
PRKXP1-201ENST00000561423 ARHGEF11O15085 1522 aa26.17■■□□□ 1.78
PRKXP1-201ENST00000561423 POLA1P09884 1462 aaPredicted RBP26.16■■□□□ 1.78
PRKXP1-201ENST00000561423 RAD54L2Q9Y4B4 1467 aa26.07■■□□□ 1.76
PRKXP1-201ENST00000561423 CHD1O14646 1710 aa26.04■■□□□ 1.76
PRKXP1-201ENST00000561423 SOGA1O94964 1423 aa26.01■■□□□ 1.75
PRKXP1-201ENST00000561423 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
PRKXP1-201ENST00000561423 FBLN2P98095 1184 aa25.99■■□□□ 1.75
PRKXP1-201ENST00000561423 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
PRKXP1-201ENST00000561423 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
PRKXP1-201ENST00000561423 CUX1P39880 1505 aa25.93■■□□□ 1.74
PRKXP1-201ENST00000561423 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
PRKXP1-201ENST00000561423 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
PRKXP1-201ENST00000561423 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
PRKXP1-201ENST00000561423 MAGI1Q96QZ7 1491 aaPredicted RBP25.81■■□□□ 1.72
PRKXP1-201ENST00000561423 CLASP1Q7Z460 1538 aa25.81■■□□□ 1.72
PRKXP1-201ENST00000561423 GRIN2BQ13224 1484 aa25.8■■□□□ 1.72
PRKXP1-201ENST00000561423 CHMP7Q8WUX9 453 aaPredicted RBP25.78■■□□□ 1.72
PRKXP1-201ENST00000561423 SYNJ1O43426 1573 aa25.74■■□□□ 1.71
PRKXP1-201ENST00000561423 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
PRKXP1-201ENST00000561423 TRHP20396 242 aaPredicted RBP25.7■■□□□ 1.7
PRKXP1-201ENST00000561423 GAPVD1Q14C86 1478 aa25.69■■□□□ 1.7
PRKXP1-201ENST00000561423 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
PRKXP1-201ENST00000561423 ABCA10Q8WWZ4 1543 aa25.67■■□□□ 1.7
PRKXP1-201ENST00000561423 PBRM1Q86U86 1689 aa25.64■■□□□ 1.7
PRKXP1-201ENST00000561423 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
PRKXP1-201ENST00000561423 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
PRKXP1-201ENST00000561423 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
PRKXP1-201ENST00000561423 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
PRKXP1-201ENST00000561423 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
PRKXP1-201ENST00000561423 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.66
PRKXP1-201ENST00000561423 ERCC6L2Q5T890 1561 aa25.41■■□□□ 1.66
PRKXP1-201ENST00000561423 NUP160Q12769 1436 aa25.41■■□□□ 1.66
PRKXP1-201ENST00000561423 CEP170Q5SW79 1584 aa25.4■■□□□ 1.66
PRKXP1-201ENST00000561423 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
PRKXP1-201ENST00000561423 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
PRKXP1-201ENST00000561423 SHROOM2Q13796 1616 aa25.28■■□□□ 1.64
PRKXP1-201ENST00000561423 PRG4Q92954 1404 aaPredicted RBP25.17■■□□□ 1.62
PRKXP1-201ENST00000561423 JPH4Q96JJ6 628 aa25.12■■□□□ 1.61
PRKXP1-201ENST00000561423 RUSC2Q8N2Y8 1516 aa25.1■■□□□ 1.61
PRKXP1-201ENST00000561423 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms