RNA–Protein interactions for RNA: ENST00000499203.6

LINC01024-201, humanhuman

TSL 1 (best) BASIC

Gene LINC01024, Length 2,769 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01024-201ENST00000499203 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
LINC01024-201ENST00000499203 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
LINC01024-201ENST00000499203 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
LINC01024-201ENST00000499203 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
LINC01024-201ENST00000499203 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
LINC01024-201ENST00000499203 HRCP23327 699 aa21.8■■□□□ 1.08
LINC01024-201ENST00000499203 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
LINC01024-201ENST00000499203 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
LINC01024-201ENST00000499203 PCGF6Q9BYE7 350 aa21.51■■□□□ 1.03
LINC01024-201ENST00000499203 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
LINC01024-201ENST00000499203 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
LINC01024-201ENST00000499203 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
LINC01024-201ENST00000499203 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
LINC01024-201ENST00000499203 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
LINC01024-201ENST00000499203 ABCC9O60706 1549 aa20.72■□□□□ 0.91
LINC01024-201ENST00000499203 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
LINC01024-201ENST00000499203 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
LINC01024-201ENST00000499203 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
LINC01024-201ENST00000499203 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
LINC01024-201ENST00000499203 PELP1Q8IZL8 1130 aaKnown RBP20.45■□□□□ 0.86
LINC01024-201ENST00000499203 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
LINC01024-201ENST00000499203 FAM9AQ8IZU1 332 aaPredicted RBP20.43■□□□□ 0.86
LINC01024-201ENST00000499203 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
LINC01024-201ENST00000499203 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
LINC01024-201ENST00000499203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
LINC01024-201ENST00000499203 CECR2Q9BXF3 1484 aa20.06■□□□□ 0.8
LINC01024-201ENST00000499203 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
LINC01024-201ENST00000499203 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
LINC01024-201ENST00000499203 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
LINC01024-201ENST00000499203 WIZO95785 1651 aa19.99■□□□□ 0.79
LINC01024-201ENST00000499203 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
LINC01024-201ENST00000499203 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
LINC01024-201ENST00000499203 DIEXFQ68CQ4 756 aaKnown RBP19.88■□□□□ 0.77
LINC01024-201ENST00000499203 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
LINC01024-201ENST00000499203 NACADO15069 1562 aa19.84■□□□□ 0.77
LINC01024-201ENST00000499203 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.77
LINC01024-201ENST00000499203 CENPBP07199 599 aaPredicted RBP19.81■□□□□ 0.76
LINC01024-201ENST00000499203 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
LINC01024-201ENST00000499203 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.75
LINC01024-201ENST00000499203 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
LINC01024-201ENST00000499203 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
LINC01024-201ENST00000499203 CCDC88BA6NC98 1476 aa19.7■□□□□ 0.74
LINC01024-201ENST00000499203 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
LINC01024-201ENST00000499203 SOGA1O94964 1423 aa19.6■□□□□ 0.73
LINC01024-201ENST00000499203 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
LINC01024-201ENST00000499203 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.73
LINC01024-201ENST00000499203 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
LINC01024-201ENST00000499203 MYT1Q01538 1121 aa19.53■□□□□ 0.72
LINC01024-201ENST00000499203 YTHDC1Q96MU7 727 aaKnown RBP19.51■□□□□ 0.71
LINC01024-201ENST00000499203 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
LINC01024-201ENST00000499203 RUSC2Q8N2Y8 1516 aa19.5■□□□□ 0.71
LINC01024-201ENST00000499203 UBTFP17480 764 aaKnown RBP19.47■□□□□ 0.71
LINC01024-201ENST00000499203 EEA1Q15075 1411 aa19.47■□□□□ 0.71
LINC01024-201ENST00000499203 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
LINC01024-201ENST00000499203 GOLGA3Q08378 1498 aa19.43■□□□□ 0.7
LINC01024-201ENST00000499203 MIER1Q8N108 512 aa19.41■□□□□ 0.7
LINC01024-201ENST00000499203 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
LINC01024-201ENST00000499203 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
LINC01024-201ENST00000499203 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
LINC01024-201ENST00000499203 KIF21BO75037 1637 aa19.25■□□□□ 0.67
LINC01024-201ENST00000499203 CLIP1P30622 1438 aa19.23■□□□□ 0.67
LINC01024-201ENST00000499203 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
LINC01024-201ENST00000499203 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
LINC01024-201ENST00000499203 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
LINC01024-201ENST00000499203 APLP2Q06481 763 aa19.1■□□□□ 0.65
LINC01024-201ENST00000499203 RAPGEF2Q9Y4G8 1499 aa19.1■□□□□ 0.65
LINC01024-201ENST00000499203 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
LINC01024-201ENST00000499203 PEG3Q9GZU2 1588 aa19.04■□□□□ 0.64
LINC01024-201ENST00000499203 DHX57Q6P158 1386 aaKnown RBP19.01■□□□□ 0.63
LINC01024-201ENST00000499203 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
LINC01024-201ENST00000499203 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
LINC01024-201ENST00000499203 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
LINC01024-201ENST00000499203 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
LINC01024-201ENST00000499203 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
LINC01024-201ENST00000499203 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
LINC01024-201ENST00000499203 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
LINC01024-201ENST00000499203 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
LINC01024-201ENST00000499203 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
LINC01024-201ENST00000499203 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
LINC01024-201ENST00000499203 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
LINC01024-201ENST00000499203 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
LINC01024-201ENST00000499203 PRXQ9BXM0 1461 aa18.8■□□□□ 0.6
LINC01024-201ENST00000499203 CUX2O14529 1486 aa18.77■□□□□ 0.6
LINC01024-201ENST00000499203 KCNH8Q96L42 1107 aa18.72■□□□□ 0.59
LINC01024-201ENST00000499203 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
LINC01024-201ENST00000499203 ITGAEP38570 1179 aa18.68■□□□□ 0.58
LINC01024-201ENST00000499203 MAPKBP1O60336 1514 aa18.66■□□□□ 0.58
LINC01024-201ENST00000499203 ANP32EQ9BTT0 268 aa18.66■□□□□ 0.58
LINC01024-201ENST00000499203 ARHGAP35Q9NRY4 1499 aa18.64■□□□□ 0.57
LINC01024-201ENST00000499203 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
LINC01024-201ENST00000499203 CUX1P39880 1505 aa18.62■□□□□ 0.57
LINC01024-201ENST00000499203 BCANQ96GW7 911 aa18.62■□□□□ 0.57
LINC01024-201ENST00000499203 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
LINC01024-201ENST00000499203 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
LINC01024-201ENST00000499203 FKBP8Q14318 412 aa18.55■□□□□ 0.56
LINC01024-201ENST00000499203 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
LINC01024-201ENST00000499203 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
LINC01024-201ENST00000499203 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
LINC01024-201ENST00000499203 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
LINC01024-201ENST00000499203 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms