Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.939e-7■■■■□ 23.4
DDX59Q5T1V6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.939e-7■■■■□ 23.4
DDX59Q5T1V6 FBRS-204ENST00000482749 725 ntTSL 513.14□□□□□ -0.311e-7■■■■□ 23.4
DDX59Q5T1V6 U2AF2-205ENST00000588850 637 ntTSL 213.86□□□□□ -0.199e-7■■■■□ 23.4
DDX59Q5T1V6 CHRD-217ENST00000496527 588 ntTSL 420.59■□□□□ 0.892e-8■■■■□ 23.4
DDX59Q5T1V6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.162e-16■■■■□ 23.3
DDX59Q5T1V6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.35□□□□□ -0.272e-16■■■■□ 23.3
DDX59Q5T1V6 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC12.17□□□□□ -0.462e-16■■■■□ 23.3
DDX59Q5T1V6 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.722e-16■■■■□ 23.3
DDX59Q5T1V6 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC10.33□□□□□ -0.762e-16■■■■□ 23.3
DDX59Q5T1V6 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC10.03□□□□□ -0.82e-16■■■■□ 23.3
DDX59Q5T1V6 NKD1-202ENST00000564336 477 ntTSL 320.31■□□□□ 0.841e-7■■■■□ 23.3
DDX59Q5T1V6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.087e-8■■■■□ 23.3
DDX59Q5T1V6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.097e-8■■■■□ 23.3
DDX59Q5T1V6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.197e-8■■■■□ 23.3
DDX59Q5T1V6 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.247e-8■■■■□ 23.3
DDX59Q5T1V6 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.867e-8■■■■□ 23.3
DDX59Q5T1V6 ARAP1-210ENST00000465814 5612 ntTSL 214.86□□□□□ -0.036e-7■■■■□ 23.3
DDX59Q5T1V6 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.266e-7■■■■□ 23.3
DDX59Q5T1V6 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.276e-7■■■■□ 23.3
DDX59Q5T1V6 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.356e-7■■■■□ 23.3
DDX59Q5T1V6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.975e-8■■■■□ 23.3
DDX59Q5T1V6 PPP2R3B-206ENST00000477110 5802 ntTSL 1 (best)19.02■□□□□ 0.645e-8■■■■□ 23.3
DDX59Q5T1V6 PPP2R3B-207ENST00000477636 519 ntTSL 514.59□□□□□ -0.075e-8■■■■□ 23.3
DDX59Q5T1V6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.647e-9■■■■□ 23.2
DDX59Q5T1V6 ARHGEF1-211ENST00000595723 872 ntTSL 514.3□□□□□ -0.122e-6■■■■□ 23.2
DDX59Q5T1V6 TPST1-204ENST00000480281 924 ntTSL 1 (best)21.42■■□□□ 1.021e-6■■■■□ 23.2
DDX59Q5T1V6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.821e-6■■■■□ 23.2
DDX59Q5T1V6 TPST1-202ENST00000442120 560 ntTSL 419.49■□□□□ 0.711e-6■■■■□ 23.2
DDX59Q5T1V6 D2HGDH-208ENST00000445308 955 ntTSL 217.54■□□□□ 0.42e-7■■■■□ 23.2
DDX59Q5T1V6 ANPEP-202ENST00000558177 918 ntTSL 37.6□□□□□ -1.192e-7■■■■□ 23.1
DDX59Q5T1V6 CLCN7-208ENST00000564968 652 ntTSL 414.05□□□□□ -0.162e-17■■■■□ 23.1
DDX59Q5T1V6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.5■□□□□ 0.072e-6■■■■□ 23.1
DDX59Q5T1V6 BAX-212ENST00000515540 300 ntTSL 314.13□□□□□ -0.152e-6■■■■□ 23.1
DDX59Q5T1V6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.93■□□□□ 0.629e-9■■■■□ 23
DDX59Q5T1V6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.92■□□□□ 0.469e-9■■■■□ 23
DDX59Q5T1V6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.332e-6■■■■□ 22.9
DDX59Q5T1V6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.282e-6■■■■□ 22.9
DDX59Q5T1V6 PHRF1-206ENST00000534320 5178 ntTSL 516.62■□□□□ 0.252e-6■■■■□ 22.9
DDX59Q5T1V6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.192e-6■■■■□ 22.9
DDX59Q5T1V6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.032e-6■■■■□ 22.9
DDX59Q5T1V6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.761e-6■■■■□ 22.9
DDX59Q5T1V6 GSK3A-203ENST00000453535 1897 ntTSL 526.91■■□□□ 1.97e-11■■■■□ 22.9
DDX59Q5T1V6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.247e-11■■■■□ 22.9
DDX59Q5T1V6 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.947e-11■■■■□ 22.9
DDX59Q5T1V6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.14■□□□□ 0.331e-6■■■■□ 22.9
DDX59Q5T1V6 AL390719.1-202ENST00000394517 397 ntTSL 58.48□□□□□ -1.051e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-211ENST00000597706 1834 ntTSL 519.58■□□□□ 0.732e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.712e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-208ENST00000595908 1750 ntTSL 517.15■□□□□ 0.342e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.12e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-213ENST00000598626 619 ntTSL 313.75□□□□□ -0.212e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-205ENST00000594500 523 ntTSL 313.3□□□□□ -0.282e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-203ENST00000537722 619 ntTSL 1 (best)13.3□□□□□ -0.282e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-204ENST00000594034 778 ntTSL 311.07□□□□□ -0.642e-6■■■■□ 22.9
DDX59Q5T1V6 GPR108-214ENST00000598955 581 ntTSL 311.06□□□□□ -0.642e-6■■■■□ 22.9
DDX59Q5T1V6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.27■■□□□ 1.167e-7■■■■□ 22.9
DDX59Q5T1V6 PPP4R4-204ENST00000555690 680 ntTSL 321.76■■□□□ 1.077e-7■■■■□ 22.9
DDX59Q5T1V6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.571e-6■■■■□ 22.9
DDX59Q5T1V6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.087e-7■■■■□ 22.9
DDX59Q5T1V6 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.521e-6■■■■□ 22.9
DDX59Q5T1V6 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.61e-6■■■■□ 22.9
DDX59Q5T1V6 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.71e-6■■■■□ 22.9
DDX59Q5T1V6 PPP4R4-205ENST00000556470 589 ntTSL 45.57□□□□□ -1.527e-7■■■■□ 22.9
DDX59Q5T1V6 PPP4R4-203ENST00000553661 564 ntTSL 43.95□□□□□ -1.787e-7■■■■□ 22.9
DDX59Q5T1V6 PPP4R4-206ENST00000556884 564 ntTSL 43.72□□□□□ -1.817e-7■■■■□ 22.9
DDX59Q5T1V6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.34■□□□□ 0.059e-8■■■■□ 22.9
DDX59Q5T1V6 AC011530.1-203ENST00000597712 432 ntTSL 213.38□□□□□ -0.279e-8■■■■□ 22.9
DDX59Q5T1V6 AC011530.1-204ENST00000595946 321 ntAPPRIS ALT2 TSL 212.47□□□□□ -0.419e-8■■■■□ 22.9
DDX59Q5T1V6 AC011530.1-202ENST00000596586 397 ntAPPRIS P5 TSL 212.47□□□□□ -0.419e-8■■■■□ 22.9
DDX59Q5T1V6 SORL1-210ENST00000532451 2165 ntTSL 1 (best)22.66■■□□□ 1.227e-9■■■■□ 22.8
DDX59Q5T1V6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.161e-10■■■■□ 22.8
DDX59Q5T1V6 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.557e-9■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.285e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.97■■□□□ 1.115e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.095e-6■■■■□ 22.8
DDX59Q5T1V6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.41■□□□□ 0.71e-8■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.685e-6■■■■□ 22.8
DDX59Q5T1V6 SYTL1-206ENST00000490170 2681 ntTSL 218.8■□□□□ 0.61e-8■■■■□ 22.8
DDX59Q5T1V6 SYTL1-207ENST00000496001 876 ntTSL 518.78■□□□□ 0.61e-8■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-219ENST00000530404 818 ntTSL 518.46■□□□□ 0.555e-6■■■■□ 22.8
DDX59Q5T1V6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.541e-8■■■■□ 22.8
DDX59Q5T1V6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.06■□□□□ 0.481e-8■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-210ENST00000464987 2205 ntTSL 518■□□□□ 0.475e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.445e-6■■■■□ 22.8
DDX59Q5T1V6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.441e-8■■■■□ 22.8
DDX59Q5T1V6 SYTL1-205ENST00000485269 895 ntTSL 517.78■□□□□ 0.441e-8■■■■□ 22.8
DDX59Q5T1V6 SYTL1-204ENST00000483926 2525 ntTSL 217.65■□□□□ 0.421e-8■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.415e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-215ENST00000525334 860 ntTSL 316.72■□□□□ 0.275e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-216ENST00000526055 469 ntTSL 216.59■□□□□ 0.255e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.125e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.61■□□□□ 0.095e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-213ENST00000524895 401 ntTSL 414.75□□□□□ -0.055e-6■■■■□ 22.8
DDX59Q5T1V6 SYTL1-209ENST00000615284 793 ntTSL 214.27□□□□□ -0.131e-8■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.21□□□□□ -0.135e-6■■■■□ 22.8
DDX59Q5T1V6 TSPAN4-220ENST00000532375 518 ntTSL 512.67□□□□□ -0.385e-6■■■■□ 22.8
DDX59Q5T1V6 SCARB1-206ENST00000539320 720 ntTSL 219.9■□□□□ 0.785e-7■■■■□ 22.8
DDX59Q5T1V6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.04■□□□□ 0.645e-7■■■■□ 22.8
DDX59Q5T1V6 SCARB1-210ENST00000545493 581 ntTSL 218.95■□□□□ 0.625e-7■■■■□ 22.8
Retrieved 100 of 7,289 protein–RNA pairs in 83.9 ms