RNA–Protein interactions for RNA: ENST00000556470.1

PPP4R4-205, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 4

Gene PPP4R4, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-205ENST00000556470 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
PPP4R4-205ENST00000556470 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
PPP4R4-205ENST00000556470 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
PPP4R4-205ENST00000556470 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
PPP4R4-205ENST00000556470 FOXD1Q16676 465 aa18.15■□□□□ 0.5
PPP4R4-205ENST00000556470 MSH5O43196 834 aa17.05■□□□□ 0.32
PPP4R4-205ENST00000556470 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
PPP4R4-205ENST00000556470 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
PPP4R4-205ENST00000556470 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
PPP4R4-205ENST00000556470 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
PPP4R4-205ENST00000556470 ADRA2BP18089 450 aa16.73■□□□□ 0.27
PPP4R4-205ENST00000556470 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
PPP4R4-205ENST00000556470 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
PPP4R4-205ENST00000556470 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
PPP4R4-205ENST00000556470 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
PPP4R4-205ENST00000556470 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
PPP4R4-205ENST00000556470 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
PPP4R4-205ENST00000556470 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
PPP4R4-205ENST00000556470 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
PPP4R4-205ENST00000556470 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
PPP4R4-205ENST00000556470 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
PPP4R4-205ENST00000556470 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
PPP4R4-205ENST00000556470 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
PPP4R4-205ENST00000556470 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
PPP4R4-205ENST00000556470 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
PPP4R4-205ENST00000556470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.172e-6■■■□□ 16.3
PPP4R4-205ENST00000556470 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
PPP4R4-205ENST00000556470 KCNA4P22459 653 aa13.6□□□□□ -0.23
PPP4R4-205ENST00000556470 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
PPP4R4-205ENST00000556470 DSG3P32926 999 aa13.55□□□□□ -0.24
PPP4R4-205ENST00000556470 CAPN15O75808 1086 aa13.52□□□□□ -0.25
PPP4R4-205ENST00000556470 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
PPP4R4-205ENST00000556470 APLP2Q06481 763 aa13.31□□□□□ -0.28
PPP4R4-205ENST00000556470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
PPP4R4-205ENST00000556470 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
PPP4R4-205ENST00000556470 POTEHQ6S545 545 aa13.26□□□□□ -0.29
PPP4R4-205ENST00000556470 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
PPP4R4-205ENST00000556470 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
PPP4R4-205ENST00000556470 ABCB7O75027 752 aa13.19□□□□□ -0.3
PPP4R4-205ENST00000556470 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
PPP4R4-205ENST00000556470 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
PPP4R4-205ENST00000556470 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
PPP4R4-205ENST00000556470 POLA2Q14181 598 aa12.89□□□□□ -0.35
PPP4R4-205ENST00000556470 SLC4A1APQ9BWU0 796 aaKnown RBP12.78□□□□□ -0.36
PPP4R4-205ENST00000556470 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
PPP4R4-205ENST00000556470 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
PPP4R4-205ENST00000556470 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
PPP4R4-205ENST00000556470 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
PPP4R4-205ENST00000556470 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
PPP4R4-205ENST00000556470 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
PPP4R4-205ENST00000556470 ZBTB22O15209 634 aa12.52□□□□□ -0.41
PPP4R4-205ENST00000556470 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
PPP4R4-205ENST00000556470 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
PPP4R4-205ENST00000556470 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
PPP4R4-205ENST00000556470 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
PPP4R4-205ENST00000556470 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
PPP4R4-205ENST00000556470 PITPNM1O00562 1244 aa12.33□□□□□ -0.44
PPP4R4-205ENST00000556470 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
PPP4R4-205ENST00000556470 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
PPP4R4-205ENST00000556470 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
PPP4R4-205ENST00000556470 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
PPP4R4-205ENST00000556470 FBLN2P98095 1184 aa12.2□□□□□ -0.46
PPP4R4-205ENST00000556470 HAX1O00165 279 aa12.16□□□□□ -0.46
PPP4R4-205ENST00000556470 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
PPP4R4-205ENST00000556470 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
PPP4R4-205ENST00000556470 EVX2Q03828 476 aa12.04□□□□□ -0.48
PPP4R4-205ENST00000556470 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
PPP4R4-205ENST00000556470 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
PPP4R4-205ENST00000556470 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
PPP4R4-205ENST00000556470 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
PPP4R4-205ENST00000556470 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
PPP4R4-205ENST00000556470 PABPN1Q86U42 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPP4R4-205ENST00000556470 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
PPP4R4-205ENST00000556470 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
PPP4R4-205ENST00000556470 GABBR2O75899 941 aa11.76□□□□□ -0.53
PPP4R4-205ENST00000556470 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
PPP4R4-205ENST00000556470 FARP1Q9Y4F1 1045 aaPredicted RBP11.64□□□□□ -0.55
PPP4R4-205ENST00000556470 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
PPP4R4-205ENST00000556470 LHX8Q68G74 356 aa11.56□□□□□ -0.56
PPP4R4-205ENST00000556470 CLCN6P51797 869 aa11.54□□□□□ -0.56
PPP4R4-205ENST00000556470 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
PPP4R4-205ENST00000556470 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
PPP4R4-205ENST00000556470 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
PPP4R4-205ENST00000556470 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
PPP4R4-205ENST00000556470 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
PPP4R4-205ENST00000556470 EHMT2Q96KQ7 1210 aa11.41□□□□□ -0.58
PPP4R4-205ENST00000556470 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
PPP4R4-205ENST00000556470 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
PPP4R4-205ENST00000556470 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
PPP4R4-205ENST00000556470 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
PPP4R4-205ENST00000556470 PAK3O75914 559 aaPredicted RBP11.24□□□□□ -0.61
PPP4R4-205ENST00000556470 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
PPP4R4-205ENST00000556470 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
PPP4R4-205ENST00000556470 PROM2Q8N271 834 aa11.21□□□□□ -0.61
PPP4R4-205ENST00000556470 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
PPP4R4-205ENST00000556470 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
PPP4R4-205ENST00000556470 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
PPP4R4-205ENST00000556470 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
PPP4R4-205ENST00000556470 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
PPP4R4-205ENST00000556470 ATMINO43313 823 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms