RNA–Protein interactions for RNA: ENST00000595723.5

ARHGEF1-211, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-211ENST00000595723 NISCHQ9Y2I1 1504 aa38.56■■■■□ 3.76
ARHGEF1-211ENST00000595723 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
ARHGEF1-211ENST00000595723 ABCC9O60706 1549 aa34.25■■■■□ 3.07
ARHGEF1-211ENST00000595723 RB1CC1Q8TDY2 1594 aa32.72■■■□□ 2.83
ARHGEF1-211ENST00000595723 NACADO15069 1562 aa32.58■■■□□ 2.81
ARHGEF1-211ENST00000595723 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
ARHGEF1-211ENST00000595723 MYO15BQ96JP2 1530 aa32.23■■■□□ 2.75
ARHGEF1-211ENST00000595723 ZCCHC6Q5VYS8 1495 aaKnown RBP31.98■■■□□ 2.71
ARHGEF1-211ENST00000595723 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
ARHGEF1-211ENST00000595723 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.714e-7■■■□□ 16.6
ARHGEF1-211ENST00000595723 UNC13AQ9UPW8 1703 aa31.95■■■□□ 2.71
ARHGEF1-211ENST00000595723 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
ARHGEF1-211ENST00000595723 BICRAQ9NZM4 1560 aa31.75■■■□□ 2.67
ARHGEF1-211ENST00000595723 SCRIBQ14160 1630 aa31.39■■■□□ 2.62
ARHGEF1-211ENST00000595723 SHROOM4Q9ULL8 1493 aa31.38■■■□□ 2.61
ARHGEF1-211ENST00000595723 CC2D2AQ9P2K1 1620 aa30.95■■■□□ 2.55
ARHGEF1-211ENST00000595723 EIF4G1Q04637 1599 aaKnown RBP30.95■■■□□ 2.54
ARHGEF1-211ENST00000595723 CECR2Q9BXF3 1484 aa30.84■■■□□ 2.53
ARHGEF1-211ENST00000595723 NCAPD3P42695 1498 aa30.09■■■□□ 2.41
ARHGEF1-211ENST00000595723 SMARCA4P51532 1647 aa30■■■□□ 2.39
ARHGEF1-211ENST00000595723 ATAD2BQ9ULI0 1458 aa30■■■□□ 2.39
ARHGEF1-211ENST00000595723 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
ARHGEF1-211ENST00000595723 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
ARHGEF1-211ENST00000595723 HMGXB3Q12766 1538 aa29.84■■■□□ 2.37
ARHGEF1-211ENST00000595723 PEG3Q9GZU2 1588 aa29.74■■■□□ 2.35
ARHGEF1-211ENST00000595723 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
ARHGEF1-211ENST00000595723 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
ARHGEF1-211ENST00000595723 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
ARHGEF1-211ENST00000595723 NESP48681 1621 aa29.49■■■□□ 2.31
ARHGEF1-211ENST00000595723 CUX2O14529 1486 aa29.45■■■□□ 2.31
ARHGEF1-211ENST00000595723 LAMC3Q9Y6N6 1575 aa29.34■■■□□ 2.29
ARHGEF1-211ENST00000595723 WIZO95785 1651 aa29.34■■■□□ 2.29
ARHGEF1-211ENST00000595723 DNAJC5Q9H3Z4 198 aa29.23■■■□□ 2.27
ARHGEF1-211ENST00000595723 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.26
ARHGEF1-211ENST00000595723 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.26
ARHGEF1-211ENST00000595723 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
ARHGEF1-211ENST00000595723 THOC2Q8NI27 1593 aaKnown RBP29.12■■■□□ 2.25
ARHGEF1-211ENST00000595723 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
ARHGEF1-211ENST00000595723 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
ARHGEF1-211ENST00000595723 CFTRP13569 1480 aa28.89■■■□□ 2.22
ARHGEF1-211ENST00000595723 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
ARHGEF1-211ENST00000595723 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
ARHGEF1-211ENST00000595723 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
ARHGEF1-211ENST00000595723 WDR62O43379 1518 aa28.8■■■□□ 2.2
ARHGEF1-211ENST00000595723 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
ARHGEF1-211ENST00000595723 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
ARHGEF1-211ENST00000595723 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
ARHGEF1-211ENST00000595723 ABCC8Q09428 1581 aa28.3■■■□□ 2.12
ARHGEF1-211ENST00000595723 TOPBP1Q92547 1522 aa28.3■■■□□ 2.12
ARHGEF1-211ENST00000595723 IFT140Q96RY7 1462 aa28.26■■■□□ 2.11
ARHGEF1-211ENST00000595723 OSCARQ8IYS5 282 aa28.21■■■□□ 2.11
ARHGEF1-211ENST00000595723 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.11
ARHGEF1-211ENST00000595723 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
ARHGEF1-211ENST00000595723 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
ARHGEF1-211ENST00000595723 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
ARHGEF1-211ENST00000595723 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
ARHGEF1-211ENST00000595723 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
ARHGEF1-211ENST00000595723 TRIM41Q8WV44 630 aa27.98■■■□□ 2.07
ARHGEF1-211ENST00000595723 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.074e-8■■■■■ 44.2
ARHGEF1-211ENST00000595723 SOGA1O94964 1423 aa27.93■■■□□ 2.06
ARHGEF1-211ENST00000595723 RAD54L2Q9Y4B4 1467 aa27.91■■■□□ 2.06
ARHGEF1-211ENST00000595723 CUX1P39880 1505 aa27.88■■■□□ 2.05
ARHGEF1-211ENST00000595723 FGD5Q6ZNL6 1462 aa27.87■■■□□ 2.05
ARHGEF1-211ENST00000595723 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
ARHGEF1-211ENST00000595723 WDR97A6NE52 1622 aa27.77■■■□□ 2.04
ARHGEF1-211ENST00000595723 CHD1O14646 1710 aa27.75■■■□□ 2.03
ARHGEF1-211ENST00000595723 FBLN2P98095 1184 aa27.74■■■□□ 2.03
ARHGEF1-211ENST00000595723 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
ARHGEF1-211ENST00000595723 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
ARHGEF1-211ENST00000595723 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
ARHGEF1-211ENST00000595723 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
ARHGEF1-211ENST00000595723 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
ARHGEF1-211ENST00000595723 GRIN2BQ13224 1484 aa27.64■■■□□ 2.02
ARHGEF1-211ENST00000595723 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
ARHGEF1-211ENST00000595723 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
ARHGEF1-211ENST00000595723 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
ARHGEF1-211ENST00000595723 GAPVD1Q14C86 1478 aa27.57■■■□□ 2
ARHGEF1-211ENST00000595723 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
ARHGEF1-211ENST00000595723 SYNJ2O15056 1496 aa27.52■■■□□ 2
ARHGEF1-211ENST00000595723 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
ARHGEF1-211ENST00000595723 PBRM1Q86U86 1689 aa27.5■■□□□ 1.99
ARHGEF1-211ENST00000595723 CYB5RLQ6IPT4 315 aa27.5■■□□□ 1.99
ARHGEF1-211ENST00000595723 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
ARHGEF1-211ENST00000595723 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
ARHGEF1-211ENST00000595723 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
ARHGEF1-211ENST00000595723 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
ARHGEF1-211ENST00000595723 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
ARHGEF1-211ENST00000595723 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
ARHGEF1-211ENST00000595723 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
ARHGEF1-211ENST00000595723 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
ARHGEF1-211ENST00000595723 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
ARHGEF1-211ENST00000595723 NUP160Q12769 1436 aa27.19■■□□□ 1.94
ARHGEF1-211ENST00000595723 CEP170Q5SW79 1584 aa27.15■■□□□ 1.94
ARHGEF1-211ENST00000595723 TRHP20396 242 aaPredicted RBP27.11■■□□□ 1.93
ARHGEF1-211ENST00000595723 SHROOM2Q13796 1616 aa27.03■■□□□ 1.92
ARHGEF1-211ENST00000595723 ERCC6L2Q5T890 1561 aa27.03■■□□□ 1.92
ARHGEF1-211ENST00000595723 KIF27Q86VH2 1401 aa27■■□□□ 1.91
ARHGEF1-211ENST00000595723 IGF1RP08069 1367 aa26.99■■□□□ 1.91
ARHGEF1-211ENST00000595723 JPH4Q96JJ6 628 aa26.97■■□□□ 1.91
ARHGEF1-211ENST00000595723 PRG4Q92954 1404 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms