RNA–Protein interactions for RNA: ENST00000398249.8

GSK3A-202, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSK3A, Length 3,524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-202ENST00000398249 NISCHQ9Y2I1 1504 aa18.51■□□□□ 0.55
GSK3A-202ENST00000398249 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
GSK3A-202ENST00000398249 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
GSK3A-202ENST00000398249 MYT1Q01538 1121 aa15.78■□□□□ 0.12
GSK3A-202ENST00000398249 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
GSK3A-202ENST00000398249 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
GSK3A-202ENST00000398249 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
GSK3A-202ENST00000398249 HRCP23327 699 aa15.54■□□□□ 0.08
GSK3A-202ENST00000398249 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
GSK3A-202ENST00000398249 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
GSK3A-202ENST00000398249 CHIC1Q5VXU3 224 aa15.31■□□□□ 0.04
GSK3A-202ENST00000398249 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.03
GSK3A-202ENST00000398249 PCGF6Q9BYE7 350 aa15.23■□□□□ 0.03
GSK3A-202ENST00000398249 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
GSK3A-202ENST00000398249 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
GSK3A-202ENST00000398249 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
GSK3A-202ENST00000398249 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
GSK3A-202ENST00000398249 NACADO15069 1562 aa14.82□□□□□ -0.04
GSK3A-202ENST00000398249 TRIM26Q12899 539 aaPredicted RBP14.79□□□□□ -0.04
GSK3A-202ENST00000398249 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
GSK3A-202ENST00000398249 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.04
GSK3A-202ENST00000398249 SLC24A1O60721 1099 aa14.74□□□□□ -0.05
GSK3A-202ENST00000398249 ABCC9O60706 1549 aa14.72□□□□□ -0.05
GSK3A-202ENST00000398249 SCRIBQ14160 1630 aa14.68□□□□□ -0.06
GSK3A-202ENST00000398249 SCAF1Q9H7N4 1312 aaKnown RBP14.67□□□□□ -0.06
GSK3A-202ENST00000398249 FAM9AQ8IZU1 332 aaPredicted RBP14.58□□□□□ -0.07
GSK3A-202ENST00000398249 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
GSK3A-202ENST00000398249 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
GSK3A-202ENST00000398249 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
GSK3A-202ENST00000398249 APLP2Q06481 763 aa14.48□□□□□ -0.09
GSK3A-202ENST00000398249 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
GSK3A-202ENST00000398249 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
GSK3A-202ENST00000398249 CECR2Q9BXF3 1484 aa14.3□□□□□ -0.12
GSK3A-202ENST00000398249 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
GSK3A-202ENST00000398249 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
GSK3A-202ENST00000398249 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
GSK3A-202ENST00000398249 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.13
GSK3A-202ENST00000398249 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
GSK3A-202ENST00000398249 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.14
GSK3A-202ENST00000398249 WIZO95785 1651 aa14.19□□□□□ -0.14
GSK3A-202ENST00000398249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
GSK3A-202ENST00000398249 SMARCA4P51532 1647 aa14.16□□□□□ -0.14
GSK3A-202ENST00000398249 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
GSK3A-202ENST00000398249 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
GSK3A-202ENST00000398249 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
GSK3A-202ENST00000398249 TOP2AP11388 1531 aaKnown RBP14.09□□□□□ -0.15
GSK3A-202ENST00000398249 DIEXFQ68CQ4 756 aaKnown RBP14.07□□□□□ -0.16
GSK3A-202ENST00000398249 EIF5BO60841 1220 aaKnown RBP14.06□□□□□ -0.16
GSK3A-202ENST00000398249 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
GSK3A-202ENST00000398249 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
GSK3A-202ENST00000398249 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
GSK3A-202ENST00000398249 SMARCA2P51531 1590 aa13.96□□□□□ -0.17
GSK3A-202ENST00000398249 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
GSK3A-202ENST00000398249 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
GSK3A-202ENST00000398249 CCDC88BA6NC98 1476 aa13.91□□□□□ -0.18
GSK3A-202ENST00000398249 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
GSK3A-202ENST00000398249 CEP162Q5TB80 1403 aa13.87□□□□□ -0.19
GSK3A-202ENST00000398249 ANP32EQ9BTT0 268 aa13.85□□□□□ -0.19
GSK3A-202ENST00000398249 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
GSK3A-202ENST00000398249 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
GSK3A-202ENST00000398249 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
GSK3A-202ENST00000398249 ANO8Q9HCE9 1232 aaPredicted RBP13.82□□□□□ -0.2
GSK3A-202ENST00000398249 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
GSK3A-202ENST00000398249 SOGA1O94964 1423 aa13.81□□□□□ -0.2
GSK3A-202ENST00000398249 MIER1Q8N108 512 aa13.79□□□□□ -0.2
GSK3A-202ENST00000398249 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
GSK3A-202ENST00000398249 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
GSK3A-202ENST00000398249 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.2
GSK3A-202ENST00000398249 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
GSK3A-202ENST00000398249 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
GSK3A-202ENST00000398249 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
GSK3A-202ENST00000398249 EEA1Q15075 1411 aa13.65□□□□□ -0.22
GSK3A-202ENST00000398249 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
GSK3A-202ENST00000398249 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
GSK3A-202ENST00000398249 PODXL2Q9NZ53 605 aa13.62□□□□□ -0.23
GSK3A-202ENST00000398249 KIF21BO75037 1637 aa13.58□□□□□ -0.24
GSK3A-202ENST00000398249 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
GSK3A-202ENST00000398249 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
GSK3A-202ENST00000398249 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
GSK3A-202ENST00000398249 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
GSK3A-202ENST00000398249 CLIP1P30622 1438 aa13.52□□□□□ -0.24
GSK3A-202ENST00000398249 BIVM-ERCC5R4GMW8 1640 aa13.51□□□□□ -0.25
GSK3A-202ENST00000398249 TOP2BQ02880 1626 aa13.51□□□□□ -0.25
GSK3A-202ENST00000398249 VPS8Q8N3P4 1428 aa13.5□□□□□ -0.25
GSK3A-202ENST00000398249 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
GSK3A-202ENST00000398249 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
GSK3A-202ENST00000398249 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
GSK3A-202ENST00000398249 DHX57Q6P158 1386 aaKnown RBP13.46□□□□□ -0.25
GSK3A-202ENST00000398249 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
GSK3A-202ENST00000398249 CFTRP13569 1480 aa13.45□□□□□ -0.26
GSK3A-202ENST00000398249 PKNOX2Q96KN3 472 aa13.45□□□□□ -0.26
GSK3A-202ENST00000398249 SALL2Q9Y467 1007 aaPredicted RBP13.44□□□□□ -0.26
GSK3A-202ENST00000398249 RAPGEF2Q9Y4G8 1499 aa13.44□□□□□ -0.26
GSK3A-202ENST00000398249 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
GSK3A-202ENST00000398249 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
GSK3A-202ENST00000398249 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
GSK3A-202ENST00000398249 CUX1P39880 1505 aa13.35□□□□□ -0.27
GSK3A-202ENST00000398249 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
GSK3A-202ENST00000398249 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
GSK3A-202ENST00000398249 CUX2O14529 1486 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms