Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
NPIPB4C9JG80 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 OR10N1P-203ENST00000641736 1305 ntBASIC11.7□□□□□ -0.54
NPIPB4C9JG80 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC069218.1-201ENST00000435269 762 ntBASIC11.7□□□□□ -0.54
NPIPB4C9JG80 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 BICD1P1-201ENST00000457832 1222 ntBASIC11.7□□□□□ -0.54
NPIPB4C9JG80 RN7SL128P-201ENST00000467883 305 ntBASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 PRDX2P3-201ENST00000515779 586 ntBASIC11.7□□□□□ -0.54
NPIPB4C9JG80 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC010976.2-201ENST00000609697 852 ntBASIC11.7□□□□□ -0.54
NPIPB4C9JG80 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC015819.3-201ENST00000624305 2674 ntBASIC11.7□□□□□ -0.54
NPIPB4C9JG80 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPB4C9JG80 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 AC007598.3-201ENST00000623077 1678 ntBASIC11.69□□□□□ -0.54
NPIPB4C9JG80 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 CASC4P1-201ENST00000456608 1312 ntBASIC11.69□□□□□ -0.54
NPIPB4C9JG80 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 AC112250.1-201ENST00000504640 745 ntBASIC11.69□□□□□ -0.54
NPIPB4C9JG80 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPB4C9JG80 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms