RNA–Protein interactions for RNA: ENST00000430606.3

MDM1-205, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene MDM1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-205ENST00000430606 NISCHQ9Y2I1 1504 aa32.63■■■□□ 2.81
MDM1-205ENST00000430606 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
MDM1-205ENST00000430606 ABCC9O60706 1549 aa28.46■■■□□ 2.15
MDM1-205ENST00000430606 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
MDM1-205ENST00000430606 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
MDM1-205ENST00000430606 NACADO15069 1562 aa27.16■■□□□ 1.94
MDM1-205ENST00000430606 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
MDM1-205ENST00000430606 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
MDM1-205ENST00000430606 DCAF1Q9Y4B6 1507 aa26.86■■□□□ 1.89
MDM1-205ENST00000430606 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
MDM1-205ENST00000430606 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
MDM1-205ENST00000430606 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
MDM1-205ENST00000430606 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
MDM1-205ENST00000430606 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
MDM1-205ENST00000430606 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
MDM1-205ENST00000430606 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
MDM1-205ENST00000430606 CC2D2AQ9P2K1 1620 aa25.69■■□□□ 1.7
MDM1-205ENST00000430606 CECR2Q9BXF3 1484 aa25.53■■□□□ 1.68
MDM1-205ENST00000430606 SMARCA4P51532 1647 aa25.32■■□□□ 1.64
MDM1-205ENST00000430606 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
MDM1-205ENST00000430606 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
MDM1-205ENST00000430606 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
MDM1-205ENST00000430606 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
MDM1-205ENST00000430606 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
MDM1-205ENST00000430606 PEG3Q9GZU2 1588 aa24.99■■□□□ 1.59
MDM1-205ENST00000430606 WIZO95785 1651 aa24.98■■□□□ 1.59
MDM1-205ENST00000430606 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
MDM1-205ENST00000430606 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
MDM1-205ENST00000430606 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
MDM1-205ENST00000430606 NESP48681 1621 aa24.67■■□□□ 1.54
MDM1-205ENST00000430606 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
MDM1-205ENST00000430606 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
MDM1-205ENST00000430606 ERCC6Q03468 1493 aa24.45■■□□□ 1.51
MDM1-205ENST00000430606 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
MDM1-205ENST00000430606 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
MDM1-205ENST00000430606 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
MDM1-205ENST00000430606 KIF21AQ7Z4S6 1674 aa24.32■■□□□ 1.48
MDM1-205ENST00000430606 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
MDM1-205ENST00000430606 CFTRP13569 1480 aa24.26■■□□□ 1.47
MDM1-205ENST00000430606 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
MDM1-205ENST00000430606 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
MDM1-205ENST00000430606 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
MDM1-205ENST00000430606 CUX2O14529 1486 aa24.06■■□□□ 1.44
MDM1-205ENST00000430606 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
MDM1-205ENST00000430606 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
MDM1-205ENST00000430606 WDR62O43379 1518 aa23.95■■□□□ 1.42
MDM1-205ENST00000430606 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
MDM1-205ENST00000430606 TOPBP1Q92547 1522 aa23.78■■□□□ 1.4
MDM1-205ENST00000430606 DNMBPQ6XZF7 1577 aa23.7■■□□□ 1.38
MDM1-205ENST00000430606 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
MDM1-205ENST00000430606 CUX1P39880 1505 aa23.64■■□□□ 1.37
MDM1-205ENST00000430606 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
MDM1-205ENST00000430606 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
MDM1-205ENST00000430606 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
MDM1-205ENST00000430606 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
MDM1-205ENST00000430606 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
MDM1-205ENST00000430606 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
MDM1-205ENST00000430606 SOGA1O94964 1423 aa23.49■■□□□ 1.35
MDM1-205ENST00000430606 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
MDM1-205ENST00000430606 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.35
MDM1-205ENST00000430606 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
MDM1-205ENST00000430606 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
MDM1-205ENST00000430606 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
MDM1-205ENST00000430606 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
MDM1-205ENST00000430606 TOP2BQ02880 1626 aa23.38■■□□□ 1.33
MDM1-205ENST00000430606 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
MDM1-205ENST00000430606 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
MDM1-205ENST00000430606 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
MDM1-205ENST00000430606 FBLN2P98095 1184 aa23.24■■□□□ 1.31
MDM1-205ENST00000430606 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
MDM1-205ENST00000430606 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
MDM1-205ENST00000430606 SNAPC4Q5SXM2 1469 aa23.18■■□□□ 1.3
MDM1-205ENST00000430606 ABCA5Q8WWZ7 1642 aa23.17■■□□□ 1.3
MDM1-205ENST00000430606 CHD1O14646 1710 aa23.16■■□□□ 1.3
MDM1-205ENST00000430606 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
MDM1-205ENST00000430606 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
MDM1-205ENST00000430606 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
MDM1-205ENST00000430606 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
MDM1-205ENST00000430606 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
MDM1-205ENST00000430606 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
MDM1-205ENST00000430606 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
MDM1-205ENST00000430606 ADAMTS12P58397 1594 aa22.94■■□□□ 1.26
MDM1-205ENST00000430606 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
MDM1-205ENST00000430606 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
MDM1-205ENST00000430606 IGF1RP08069 1367 aa22.91■■□□□ 1.26
MDM1-205ENST00000430606 FHAD1B1AJZ9 1412 aa22.89■■□□□ 1.26
MDM1-205ENST00000430606 GRIN2AQ12879 1464 aa22.89■■□□□ 1.25
MDM1-205ENST00000430606 RIMBP3CA6NJZ7 1639 aa22.83■■□□□ 1.25
MDM1-205ENST00000430606 RIMBP3BA6NNM3 1639 aa22.83■■□□□ 1.25
MDM1-205ENST00000430606 RIMBP3Q9UFD9 1639 aa22.83■■□□□ 1.25
MDM1-205ENST00000430606 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
MDM1-205ENST00000430606 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
MDM1-205ENST00000430606 CEP170Q5SW79 1584 aa22.81■■□□□ 1.24
MDM1-205ENST00000430606 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
MDM1-205ENST00000430606 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
MDM1-205ENST00000430606 NUP160Q12769 1436 aa22.75■■□□□ 1.23
MDM1-205ENST00000430606 CUL7Q14999 1698 aa22.74■■□□□ 1.23
MDM1-205ENST00000430606 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
MDM1-205ENST00000430606 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
MDM1-205ENST00000430606 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms