RNA–Protein interactions for RNA: ENST00000445399.5

TGFA-206, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-206ENST00000445399 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
TGFA-206ENST00000445399 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
TGFA-206ENST00000445399 ABCC9O60706 1549 aa27.01■■□□□ 1.91
TGFA-206ENST00000445399 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
TGFA-206ENST00000445399 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
TGFA-206ENST00000445399 NACADO15069 1562 aa26.12■■□□□ 1.77
TGFA-206ENST00000445399 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
TGFA-206ENST00000445399 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
TGFA-206ENST00000445399 RB1CC1Q8TDY2 1594 aa26.06■■□□□ 1.76
TGFA-206ENST00000445399 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
TGFA-206ENST00000445399 UNC13AQ9UPW8 1703 aa25.46■■□□□ 1.67
TGFA-206ENST00000445399 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
TGFA-206ENST00000445399 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
TGFA-206ENST00000445399 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.62
TGFA-206ENST00000445399 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
TGFA-206ENST00000445399 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
TGFA-206ENST00000445399 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
TGFA-206ENST00000445399 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
TGFA-206ENST00000445399 BAZ1AQ9NRL2 1556 aaPredicted RBP24.41■■□□□ 1.5
TGFA-206ENST00000445399 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
TGFA-206ENST00000445399 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
TGFA-206ENST00000445399 ATAD2BQ9ULI0 1458 aa24.22■■□□□ 1.47
TGFA-206ENST00000445399 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
TGFA-206ENST00000445399 NCAPD3P42695 1498 aa24.15■■□□□ 1.46
TGFA-206ENST00000445399 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
TGFA-206ENST00000445399 PEG3Q9GZU2 1588 aa24.14■■□□□ 1.45
TGFA-206ENST00000445399 WIZO95785 1651 aa24.08■■□□□ 1.45
TGFA-206ENST00000445399 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
TGFA-206ENST00000445399 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
TGFA-206ENST00000445399 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
TGFA-206ENST00000445399 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
TGFA-206ENST00000445399 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
TGFA-206ENST00000445399 NESP48681 1621 aa23.49■■□□□ 1.35
TGFA-206ENST00000445399 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
TGFA-206ENST00000445399 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
TGFA-206ENST00000445399 CFTRP13569 1480 aa23.39■■□□□ 1.34
TGFA-206ENST00000445399 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
TGFA-206ENST00000445399 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
TGFA-206ENST00000445399 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
TGFA-206ENST00000445399 KIF21AQ7Z4S6 1674 aa23.15■■□□□ 1.3
TGFA-206ENST00000445399 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
TGFA-206ENST00000445399 CEP164Q9UPV0 1460 aa23.1■■□□□ 1.29
TGFA-206ENST00000445399 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
TGFA-206ENST00000445399 THOC2Q8NI27 1593 aaKnown RBP23■■□□□ 1.27
TGFA-206ENST00000445399 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
TGFA-206ENST00000445399 WDR62O43379 1518 aa22.91■■□□□ 1.26
TGFA-206ENST00000445399 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
TGFA-206ENST00000445399 CUX2O14529 1486 aa22.84■■□□□ 1.25
TGFA-206ENST00000445399 ABCC8Q09428 1581 aa22.83■■□□□ 1.25
TGFA-206ENST00000445399 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
TGFA-206ENST00000445399 CUX1P39880 1505 aa22.82■■□□□ 1.24
TGFA-206ENST00000445399 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
TGFA-206ENST00000445399 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
TGFA-206ENST00000445399 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
TGFA-206ENST00000445399 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
TGFA-206ENST00000445399 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
TGFA-206ENST00000445399 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
TGFA-206ENST00000445399 RAD54L2Q9Y4B4 1467 aa22.62■■□□□ 1.21
TGFA-206ENST00000445399 SOGA1O94964 1423 aa22.62■■□□□ 1.21
TGFA-206ENST00000445399 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
TGFA-206ENST00000445399 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
TGFA-206ENST00000445399 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
TGFA-206ENST00000445399 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
TGFA-206ENST00000445399 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
TGFA-206ENST00000445399 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
TGFA-206ENST00000445399 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
TGFA-206ENST00000445399 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.18
TGFA-206ENST00000445399 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
TGFA-206ENST00000445399 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
TGFA-206ENST00000445399 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
TGFA-206ENST00000445399 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
TGFA-206ENST00000445399 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
TGFA-206ENST00000445399 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
TGFA-206ENST00000445399 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
TGFA-206ENST00000445399 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
TGFA-206ENST00000445399 PBRM1Q86U86 1689 aa22.2■■□□□ 1.15
TGFA-206ENST00000445399 IGF1RP08069 1367 aa22.2■■□□□ 1.14
TGFA-206ENST00000445399 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
TGFA-206ENST00000445399 MAGI1Q96QZ7 1491 aaPredicted RBP22.16■■□□□ 1.14
TGFA-206ENST00000445399 FBLN2P98095 1184 aa22.12■■□□□ 1.13
TGFA-206ENST00000445399 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
TGFA-206ENST00000445399 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
TGFA-206ENST00000445399 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
TGFA-206ENST00000445399 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.13
TGFA-206ENST00000445399 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
TGFA-206ENST00000445399 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
TGFA-206ENST00000445399 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
TGFA-206ENST00000445399 EEA1Q15075 1411 aa22.05■■□□□ 1.12
TGFA-206ENST00000445399 CHD1O14646 1710 aa22.03■■□□□ 1.12
TGFA-206ENST00000445399 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
TGFA-206ENST00000445399 CUL7Q14999 1698 aa22.01■■□□□ 1.11
TGFA-206ENST00000445399 GRIN2AQ12879 1464 aa22■■□□□ 1.11
TGFA-206ENST00000445399 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
TGFA-206ENST00000445399 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
TGFA-206ENST00000445399 NUP160Q12769 1436 aa21.9■■□□□ 1.1
TGFA-206ENST00000445399 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
TGFA-206ENST00000445399 DNAJC5Q9H3Z4 198 aa21.83■■□□□ 1.09
TGFA-206ENST00000445399 CLASP1Q7Z460 1538 aa21.82■■□□□ 1.08
TGFA-206ENST00000445399 KIF21BO75037 1637 aa21.78■■□□□ 1.08
TGFA-206ENST00000445399 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms