RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 NISCHQ9Y2I1 1504 aa23.88■■□□□ 1.41
TNFRSF11A-205ENST00000616710 SUPT5HO00267 1087 aaKnown RBP23.47■■□□□ 1.35
TNFRSF11A-205ENST00000616710 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
TNFRSF11A-205ENST00000616710 PPARGC1BQ86YN6 1023 aaKnown RBP23.42■■□□□ 1.34
TNFRSF11A-205ENST00000616710 HRCP23327 699 aa23.29■■□□□ 1.32
TNFRSF11A-205ENST00000616710 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
TNFRSF11A-205ENST00000616710 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
TNFRSF11A-205ENST00000616710 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
TNFRSF11A-205ENST00000616710 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
TNFRSF11A-205ENST00000616710 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
TNFRSF11A-205ENST00000616710 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
TNFRSF11A-205ENST00000616710 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
TNFRSF11A-205ENST00000616710 MYT1Q01538 1121 aa22.06■■□□□ 1.12
TNFRSF11A-205ENST00000616710 TRIM26Q12899 539 aaPredicted RBP22.02■■□□□ 1.12
TNFRSF11A-205ENST00000616710 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF11A-205ENST00000616710 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
TNFRSF11A-205ENST00000616710 GTF3C3Q9Y5Q9 886 aa21.96■■□□□ 1.11
TNFRSF11A-205ENST00000616710 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.1
TNFRSF11A-205ENST00000616710 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.1
TNFRSF11A-205ENST00000616710 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
TNFRSF11A-205ENST00000616710 CENPBP07199 599 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF11A-205ENST00000616710 NEUROD1Q13562 356 aa21.79■■□□□ 1.08
TNFRSF11A-205ENST00000616710 ACIN1Q9UKV3 1341 aaKnown RBP21.73■■□□□ 1.07
TNFRSF11A-205ENST00000616710 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF11A-205ENST00000616710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF11A-205ENST00000616710 DIEXFQ68CQ4 756 aaKnown RBP21.52■■□□□ 1.04
TNFRSF11A-205ENST00000616710 TRIM41Q8WV44 630 aa21.3■■□□□ 1
TNFRSF11A-205ENST00000616710 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
TNFRSF11A-205ENST00000616710 BCANQ96GW7 911 aa20.96■□□□□ 0.95
TNFRSF11A-205ENST00000616710 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
TNFRSF11A-205ENST00000616710 MIER1Q8N108 512 aa20.84■□□□□ 0.93
TNFRSF11A-205ENST00000616710 ZNF316A6NFI3 1004 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF11A-205ENST00000616710 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
TNFRSF11A-205ENST00000616710 HNRNPUL2Q1KMD3 747 aaKnown RBP20.79■□□□□ 0.92
TNFRSF11A-205ENST00000616710 RANGAP1P46060 587 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF11A-205ENST00000616710 ERICH6Q7L0X2 663 aa20.73■□□□□ 0.91
TNFRSF11A-205ENST00000616710 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
TNFRSF11A-205ENST00000616710 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
TNFRSF11A-205ENST00000616710 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
TNFRSF11A-205ENST00000616710 SUPT16HQ9Y5B9 1047 aaKnown RBP20.47■□□□□ 0.87
TNFRSF11A-205ENST00000616710 NEFLP07196 543 aa20.46■□□□□ 0.87
TNFRSF11A-205ENST00000616710 ITGAEP38570 1179 aa20.41■□□□□ 0.86
TNFRSF11A-205ENST00000616710 APLP2Q06481 763 aa20.41■□□□□ 0.86
TNFRSF11A-205ENST00000616710 TSHZ2Q9NRE2 1034 aa20.4■□□□□ 0.86
TNFRSF11A-205ENST00000616710 FKBP8Q14318 412 aa20.37■□□□□ 0.85
TNFRSF11A-205ENST00000616710 TRIM52Q96A61 297 aa20.11■□□□□ 0.81
TNFRSF11A-205ENST00000616710 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
TNFRSF11A-205ENST00000616710 PRKCSHP14314 528 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF11A-205ENST00000616710 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.81
TNFRSF11A-205ENST00000616710 NBR1Q14596 966 aa20.07■□□□□ 0.8
TNFRSF11A-205ENST00000616710 RBM19Q9Y4C8 960 aaKnown RBP20.07■□□□□ 0.8
TNFRSF11A-205ENST00000616710 KCNH8Q96L42 1107 aa20.04■□□□□ 0.8
TNFRSF11A-205ENST00000616710 RTN4Q9NQC3 1192 aaKnown RBP19.95■□□□□ 0.78
TNFRSF11A-205ENST00000616710 CNGB1Q14028 1251 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF11A-205ENST00000616710 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
TNFRSF11A-205ENST00000616710 HIRIP3Q9BW71 556 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF11A-205ENST00000616710 CDK11AQ9UQ88 783 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF11A-205ENST00000616710 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
TNFRSF11A-205ENST00000616710 CCDC136Q96JN2 1154 aa19.86■□□□□ 0.77
TNFRSF11A-205ENST00000616710 DEKP35659 375 aaKnown RBP19.82■□□□□ 0.76
TNFRSF11A-205ENST00000616710 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
TNFRSF11A-205ENST00000616710 EIF5BO60841 1220 aaKnown RBP19.81■□□□□ 0.76
TNFRSF11A-205ENST00000616710 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF11A-205ENST00000616710 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF11A-205ENST00000616710 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF11A-205ENST00000616710 ABCC9O60706 1549 aa19.69■□□□□ 0.74
TNFRSF11A-205ENST00000616710 ANP32CO43423 234 aa19.68■□□□□ 0.74
TNFRSF11A-205ENST00000616710 HNRNPUQ00839 825 aaKnown RBP eCLIP19.67■□□□□ 0.74
TNFRSF11A-205ENST00000616710 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
TNFRSF11A-205ENST00000616710 MSH5O43196 834 aa19.65■□□□□ 0.74
TNFRSF11A-205ENST00000616710 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF11A-205ENST00000616710 NPM2Q86SE8 214 aaKnown RBP19.63■□□□□ 0.73
TNFRSF11A-205ENST00000616710 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
TNFRSF11A-205ENST00000616710 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
TNFRSF11A-205ENST00000616710 SALL2Q9Y467 1007 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF11A-205ENST00000616710 B4GALNT3Q6L9W6 998 aa19.52■□□□□ 0.72
TNFRSF11A-205ENST00000616710 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
TNFRSF11A-205ENST00000616710 POLR3GLQ9BT43 218 aa19.5■□□□□ 0.71
TNFRSF11A-205ENST00000616710 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
TNFRSF11A-205ENST00000616710 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
TNFRSF11A-205ENST00000616710 ANP32AP39687 249 aaKnown RBP19.44■□□□□ 0.7
TNFRSF11A-205ENST00000616710 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
TNFRSF11A-205ENST00000616710 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
TNFRSF11A-205ENST00000616710 NOP58Q9Y2X3 529 aaKnown RBP19.41■□□□□ 0.7
TNFRSF11A-205ENST00000616710 ZBTB47Q9UFB7 747 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF11A-205ENST00000616710 IL27Q8NEV9 243 aa19.39■□□□□ 0.69
TNFRSF11A-205ENST00000616710 MYT1LQ9UL68 1186 aa19.39■□□□□ 0.69
TNFRSF11A-205ENST00000616710 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.69
TNFRSF11A-205ENST00000616710 SOGA1O94964 1423 aa19.36■□□□□ 0.69
TNFRSF11A-205ENST00000616710 DAXXQ9UER7 740 aaPredicted RBP19.34■□□□□ 0.69
TNFRSF11A-205ENST00000616710 PAK3O75914 559 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF11A-205ENST00000616710 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.68
TNFRSF11A-205ENST00000616710 FANCIQ9NVI1 1328 aa19.25■□□□□ 0.67
TNFRSF11A-205ENST00000616710 CLIP1P30622 1438 aa19.24■□□□□ 0.67
TNFRSF11A-205ENST00000616710 NEFMP07197 916 aa19.22■□□□□ 0.67
TNFRSF11A-205ENST00000616710 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
TNFRSF11A-205ENST00000616710 ARXQ96QS3 562 aa19.21■□□□□ 0.67
TNFRSF11A-205ENST00000616710 PPP4R2Q9NY27 417 aa19.2■□□□□ 0.66
TNFRSF11A-205ENST00000616710 DHX57Q6P158 1386 aaKnown RBP19.19■□□□□ 0.66
TNFRSF11A-205ENST00000616710 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms