RNA–Protein interactions for RNA: ENST00000372271.3

FAM78A-203, Transcript of family with sequence similarity 78 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78A, Length 3,966 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-203ENST00000372271 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
FAM78A-203ENST00000372271 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
FAM78A-203ENST00000372271 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
FAM78A-203ENST00000372271 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
FAM78A-203ENST00000372271 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
FAM78A-203ENST00000372271 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
FAM78A-203ENST00000372271 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
FAM78A-203ENST00000372271 HRCP23327 699 aa21.62■■□□□ 1.05
FAM78A-203ENST00000372271 LOC105371045A0A1W2PR82 267 aa21.56■■□□□ 1.04
FAM78A-203ENST00000372271 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
FAM78A-203ENST00000372271 FAM9AQ8IZU1 332 aaPredicted RBP21.53■■□□□ 1.04
FAM78A-203ENST00000372271 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
FAM78A-203ENST00000372271 TRIM41Q8WV44 630 aa21.32■■□□□ 1
FAM78A-203ENST00000372271 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
FAM78A-203ENST00000372271 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
FAM78A-203ENST00000372271 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
FAM78A-203ENST00000372271 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
FAM78A-203ENST00000372271 ZEB1P37275 1124 aaPredicted RBP20.92■□□□□ 0.94
FAM78A-203ENST00000372271 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
FAM78A-203ENST00000372271 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
FAM78A-203ENST00000372271 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
FAM78A-203ENST00000372271 ABCC9O60706 1549 aa20.64■□□□□ 0.9
FAM78A-203ENST00000372271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
FAM78A-203ENST00000372271 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
FAM78A-203ENST00000372271 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
FAM78A-203ENST00000372271 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
FAM78A-203ENST00000372271 APLP2Q06481 763 aa20.37■□□□□ 0.85
FAM78A-203ENST00000372271 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
FAM78A-203ENST00000372271 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
FAM78A-203ENST00000372271 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
FAM78A-203ENST00000372271 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
FAM78A-203ENST00000372271 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
FAM78A-203ENST00000372271 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
FAM78A-203ENST00000372271 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
FAM78A-203ENST00000372271 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
FAM78A-203ENST00000372271 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
FAM78A-203ENST00000372271 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
FAM78A-203ENST00000372271 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
FAM78A-203ENST00000372271 GTF3C3Q9Y5Q9 886 aa19.96■□□□□ 0.79
FAM78A-203ENST00000372271 NACADO15069 1562 aa19.95■□□□□ 0.78
FAM78A-203ENST00000372271 ACIN1Q9UKV3 1341 aaKnown RBP19.95■□□□□ 0.78
FAM78A-203ENST00000372271 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
FAM78A-203ENST00000372271 WIZO95785 1651 aa19.87■□□□□ 0.77
FAM78A-203ENST00000372271 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
FAM78A-203ENST00000372271 ITGAEP38570 1179 aa19.82■□□□□ 0.76
FAM78A-203ENST00000372271 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
FAM78A-203ENST00000372271 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
FAM78A-203ENST00000372271 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
FAM78A-203ENST00000372271 SOGA1O94964 1423 aa19.76■□□□□ 0.75
FAM78A-203ENST00000372271 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
FAM78A-203ENST00000372271 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
FAM78A-203ENST00000372271 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
FAM78A-203ENST00000372271 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
FAM78A-203ENST00000372271 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
FAM78A-203ENST00000372271 MIER1Q8N108 512 aa19.57■□□□□ 0.72
FAM78A-203ENST00000372271 CLIP1P30622 1438 aa19.56■□□□□ 0.72
FAM78A-203ENST00000372271 EEA1Q15075 1411 aa19.56■□□□□ 0.72
FAM78A-203ENST00000372271 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
FAM78A-203ENST00000372271 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
FAM78A-203ENST00000372271 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
FAM78A-203ENST00000372271 FAM50AQ14320 339 aaKnown RBP19.39■□□□□ 0.69
FAM78A-203ENST00000372271 SMARCA4P51532 1647 aa19.39■□□□□ 0.69
FAM78A-203ENST00000372271 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
FAM78A-203ENST00000372271 P3H3Q8IVL6 736 aa19.33■□□□□ 0.68
FAM78A-203ENST00000372271 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
FAM78A-203ENST00000372271 MYT1Q01538 1121 aa19.27■□□□□ 0.68
FAM78A-203ENST00000372271 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
FAM78A-203ENST00000372271 NEFLP07196 543 aa19.23■□□□□ 0.67
FAM78A-203ENST00000372271 BCANQ96GW7 911 aa19.22■□□□□ 0.67
FAM78A-203ENST00000372271 KANK4Q5T7N3 995 aaPredicted RBP19.19■□□□□ 0.66
FAM78A-203ENST00000372271 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
FAM78A-203ENST00000372271 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
FAM78A-203ENST00000372271 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
FAM78A-203ENST00000372271 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
FAM78A-203ENST00000372271 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
FAM78A-203ENST00000372271 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
FAM78A-203ENST00000372271 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
FAM78A-203ENST00000372271 EIF4G1Q04637 1599 aaKnown RBP19■□□□□ 0.63
FAM78A-203ENST00000372271 ANP32CO43423 234 aa18.99■□□□□ 0.63
FAM78A-203ENST00000372271 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
FAM78A-203ENST00000372271 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
FAM78A-203ENST00000372271 CNGB1Q14028 1251 aaPredicted RBP18.97■□□□□ 0.63
FAM78A-203ENST00000372271 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
FAM78A-203ENST00000372271 FKBP8Q14318 412 aa18.95■□□□□ 0.62
FAM78A-203ENST00000372271 TRIM52Q96A61 297 aa18.93■□□□□ 0.62
FAM78A-203ENST00000372271 SUPT16HQ9Y5B9 1047 aaKnown RBP18.91■□□□□ 0.62
FAM78A-203ENST00000372271 KIF21BO75037 1637 aa18.91■□□□□ 0.62
FAM78A-203ENST00000372271 ARID3CA6NKF2 412 aa18.9■□□□□ 0.62
FAM78A-203ENST00000372271 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
FAM78A-203ENST00000372271 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
FAM78A-203ENST00000372271 CUX2O14529 1486 aa18.86■□□□□ 0.61
FAM78A-203ENST00000372271 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
FAM78A-203ENST00000372271 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
FAM78A-203ENST00000372271 KCNH8Q96L42 1107 aa18.83■□□□□ 0.61
FAM78A-203ENST00000372271 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
FAM78A-203ENST00000372271 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
FAM78A-203ENST00000372271 UNC13AQ9UPW8 1703 aa18.79■□□□□ 0.6
FAM78A-203ENST00000372271 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
FAM78A-203ENST00000372271 ARAP1Q96P48 1450 aa18.76■□□□□ 0.59
FAM78A-203ENST00000372271 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms