RNA–Protein interactions for RNA: ENST00000506696.1

SNCB-203, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNCB, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-203ENST00000506696 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
SNCB-203ENST00000506696 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
SNCB-203ENST00000506696 ABCC9O60706 1549 aa30.71■■■□□ 2.51
SNCB-203ENST00000506696 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
SNCB-203ENST00000506696 DCAF8L2P0C7V8 631 aa29.01■■■□□ 2.23
SNCB-203ENST00000506696 NACADO15069 1562 aa28.98■■■□□ 2.23
SNCB-203ENST00000506696 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
SNCB-203ENST00000506696 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
SNCB-203ENST00000506696 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
SNCB-203ENST00000506696 MYO15BQ96JP2 1530 aa28.56■■■□□ 2.16
SNCB-203ENST00000506696 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
SNCB-203ENST00000506696 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
SNCB-203ENST00000506696 DCAF1Q9Y4B6 1507 aa28.29■■■□□ 2.12
SNCB-203ENST00000506696 SCRIBQ14160 1630 aa28.16■■■□□ 2.1
SNCB-203ENST00000506696 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
SNCB-203ENST00000506696 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
SNCB-203ENST00000506696 EIF4G1Q04637 1599 aaKnown RBP27.66■■■□□ 2.02
SNCB-203ENST00000506696 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
SNCB-203ENST00000506696 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
SNCB-203ENST00000506696 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
SNCB-203ENST00000506696 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
SNCB-203ENST00000506696 SMARCA2P51531 1590 aa26.65■■□□□ 1.86
SNCB-203ENST00000506696 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
SNCB-203ENST00000506696 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
SNCB-203ENST00000506696 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
SNCB-203ENST00000506696 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
SNCB-203ENST00000506696 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
SNCB-203ENST00000506696 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
SNCB-203ENST00000506696 NESP48681 1621 aa26.44■■□□□ 1.82
SNCB-203ENST00000506696 CUX2O14529 1486 aa26.26■■□□□ 1.79
SNCB-203ENST00000506696 WIZO95785 1651 aa26.25■■□□□ 1.79
SNCB-203ENST00000506696 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
SNCB-203ENST00000506696 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
SNCB-203ENST00000506696 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
SNCB-203ENST00000506696 DNAJC5Q9H3Z4 198 aa26.06■■□□□ 1.76
SNCB-203ENST00000506696 RSF1Q96T23 1441 aaPredicted RBP26.01■■□□□ 1.75
SNCB-203ENST00000506696 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
SNCB-203ENST00000506696 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
SNCB-203ENST00000506696 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
SNCB-203ENST00000506696 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
SNCB-203ENST00000506696 WDR62O43379 1518 aa25.73■■□□□ 1.71
SNCB-203ENST00000506696 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
SNCB-203ENST00000506696 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
SNCB-203ENST00000506696 CFTRP13569 1480 aa25.72■■□□□ 1.71
SNCB-203ENST00000506696 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
SNCB-203ENST00000506696 URB2Q14146 1524 aaKnown RBP25.55■■□□□ 1.68
SNCB-203ENST00000506696 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
SNCB-203ENST00000506696 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
SNCB-203ENST00000506696 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
SNCB-203ENST00000506696 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
SNCB-203ENST00000506696 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
SNCB-203ENST00000506696 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
SNCB-203ENST00000506696 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
SNCB-203ENST00000506696 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.61
SNCB-203ENST00000506696 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
SNCB-203ENST00000506696 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
SNCB-203ENST00000506696 TARBP1Q13395 1621 aaKnown RBP25.03■■□□□ 1.6
SNCB-203ENST00000506696 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
SNCB-203ENST00000506696 AQRO60306 1485 aaKnown RBP eCLIP25■■□□□ 1.59
SNCB-203ENST00000506696 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
SNCB-203ENST00000506696 CUX1P39880 1505 aa24.93■■□□□ 1.58
SNCB-203ENST00000506696 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
SNCB-203ENST00000506696 SOGA1O94964 1423 aa24.88■■□□□ 1.57
SNCB-203ENST00000506696 CHD1O14646 1710 aa24.87■■□□□ 1.57
SNCB-203ENST00000506696 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
SNCB-203ENST00000506696 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
SNCB-203ENST00000506696 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
SNCB-203ENST00000506696 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
SNCB-203ENST00000506696 FBLN2P98095 1184 aa24.8■■□□□ 1.56
SNCB-203ENST00000506696 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
SNCB-203ENST00000506696 SNAPC4Q5SXM2 1469 aa24.76■■□□□ 1.55
SNCB-203ENST00000506696 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
SNCB-203ENST00000506696 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
SNCB-203ENST00000506696 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
SNCB-203ENST00000506696 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
SNCB-203ENST00000506696 GAPVD1Q14C86 1478 aa24.59■■□□□ 1.53
SNCB-203ENST00000506696 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
SNCB-203ENST00000506696 SYNJ1O43426 1573 aa24.58■■□□□ 1.52
SNCB-203ENST00000506696 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
SNCB-203ENST00000506696 CHMP7Q8WUX9 453 aaPredicted RBP24.57■■□□□ 1.52
SNCB-203ENST00000506696 ARAP1Q96P48 1450 aa24.57■■□□□ 1.52
SNCB-203ENST00000506696 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
SNCB-203ENST00000506696 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
SNCB-203ENST00000506696 SYNJ2O15056 1496 aa24.54■■□□□ 1.52
SNCB-203ENST00000506696 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
SNCB-203ENST00000506696 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
SNCB-203ENST00000506696 TOP2BQ02880 1626 aa24.52■■□□□ 1.52
SNCB-203ENST00000506696 ADAMTS12P58397 1594 aa24.4■■□□□ 1.5
SNCB-203ENST00000506696 GRIN2AQ12879 1464 aa24.35■■□□□ 1.49
SNCB-203ENST00000506696 CEP170Q5SW79 1584 aa24.3■■□□□ 1.48
SNCB-203ENST00000506696 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
SNCB-203ENST00000506696 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
SNCB-203ENST00000506696 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
SNCB-203ENST00000506696 TRHP20396 242 aaPredicted RBP24.25■■□□□ 1.47
SNCB-203ENST00000506696 NUP160Q12769 1436 aa24.24■■□□□ 1.47
SNCB-203ENST00000506696 SHROOM2Q13796 1616 aa24.12■■□□□ 1.45
SNCB-203ENST00000506696 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
SNCB-203ENST00000506696 PRG4Q92954 1404 aaPredicted RBP24.02■■□□□ 1.44
SNCB-203ENST00000506696 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
SNCB-203ENST00000506696 IGF1RP08069 1367 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms