RNA–Protein interactions for RNA: ENST00000628202.2

DNMT3L-204, Transcript of DNA methyltransferase 3 like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DNMT3L, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3L-204ENST00000628202 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
DNMT3L-204ENST00000628202 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
DNMT3L-204ENST00000628202 ABCC9O60706 1549 aa29.58■■■□□ 2.33
DNMT3L-204ENST00000628202 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
DNMT3L-204ENST00000628202 NACADO15069 1562 aa28.29■■■□□ 2.12
DNMT3L-204ENST00000628202 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
DNMT3L-204ENST00000628202 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
DNMT3L-204ENST00000628202 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
DNMT3L-204ENST00000628202 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
DNMT3L-204ENST00000628202 DCAF1Q9Y4B6 1507 aa27.83■■■□□ 2.05
DNMT3L-204ENST00000628202 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
DNMT3L-204ENST00000628202 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
DNMT3L-204ENST00000628202 DNAJC5BQ9UF47 199 aa27.44■■□□□ 1.98
DNMT3L-204ENST00000628202 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
DNMT3L-204ENST00000628202 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
DNMT3L-204ENST00000628202 SHROOM4Q9ULL8 1493 aa27.28■■□□□ 1.96
DNMT3L-204ENST00000628202 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
DNMT3L-204ENST00000628202 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
DNMT3L-204ENST00000628202 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.85
DNMT3L-204ENST00000628202 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
DNMT3L-204ENST00000628202 SMARCA4P51532 1647 aa26.18■■□□□ 1.78
DNMT3L-204ENST00000628202 BAZ1AQ9NRL2 1556 aaPredicted RBP26.08■■□□□ 1.77
DNMT3L-204ENST00000628202 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
DNMT3L-204ENST00000628202 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
DNMT3L-204ENST00000628202 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
DNMT3L-204ENST00000628202 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
DNMT3L-204ENST00000628202 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
DNMT3L-204ENST00000628202 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
DNMT3L-204ENST00000628202 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
DNMT3L-204ENST00000628202 WIZO95785 1651 aa25.62■■□□□ 1.69
DNMT3L-204ENST00000628202 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
DNMT3L-204ENST00000628202 NESP48681 1621 aa25.54■■□□□ 1.68
DNMT3L-204ENST00000628202 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
DNMT3L-204ENST00000628202 CUX2O14529 1486 aa25.47■■□□□ 1.67
DNMT3L-204ENST00000628202 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.67
DNMT3L-204ENST00000628202 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
DNMT3L-204ENST00000628202 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
DNMT3L-204ENST00000628202 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
DNMT3L-204ENST00000628202 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
DNMT3L-204ENST00000628202 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
DNMT3L-204ENST00000628202 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.61
DNMT3L-204ENST00000628202 CFTRP13569 1480 aa25.1■■□□□ 1.61
DNMT3L-204ENST00000628202 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
DNMT3L-204ENST00000628202 PRDM2Q13029 1718 aa25.03■■□□□ 1.6
DNMT3L-204ENST00000628202 WDR62O43379 1518 aa25.02■■□□□ 1.6
DNMT3L-204ENST00000628202 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
DNMT3L-204ENST00000628202 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
DNMT3L-204ENST00000628202 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
DNMT3L-204ENST00000628202 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
DNMT3L-204ENST00000628202 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
DNMT3L-204ENST00000628202 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
DNMT3L-204ENST00000628202 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
DNMT3L-204ENST00000628202 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
DNMT3L-204ENST00000628202 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
DNMT3L-204ENST00000628202 ZNF608Q9ULD9 1512 aaPredicted RBP24.41■■□□□ 1.5
DNMT3L-204ENST00000628202 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
DNMT3L-204ENST00000628202 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
DNMT3L-204ENST00000628202 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
DNMT3L-204ENST00000628202 CUX1P39880 1505 aa24.31■■□□□ 1.48
DNMT3L-204ENST00000628202 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
DNMT3L-204ENST00000628202 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
DNMT3L-204ENST00000628202 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
DNMT3L-204ENST00000628202 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
DNMT3L-204ENST00000628202 SOGA1O94964 1423 aa24.19■■□□□ 1.46
DNMT3L-204ENST00000628202 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.46
DNMT3L-204ENST00000628202 CHD1O14646 1710 aa24.13■■□□□ 1.45
DNMT3L-204ENST00000628202 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
DNMT3L-204ENST00000628202 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
DNMT3L-204ENST00000628202 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.44
DNMT3L-204ENST00000628202 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
DNMT3L-204ENST00000628202 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
DNMT3L-204ENST00000628202 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
DNMT3L-204ENST00000628202 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
DNMT3L-204ENST00000628202 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
DNMT3L-204ENST00000628202 SNAPC4Q5SXM2 1469 aa24.01■■□□□ 1.43
DNMT3L-204ENST00000628202 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
DNMT3L-204ENST00000628202 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
DNMT3L-204ENST00000628202 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
DNMT3L-204ENST00000628202 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
DNMT3L-204ENST00000628202 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
DNMT3L-204ENST00000628202 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
DNMT3L-204ENST00000628202 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
DNMT3L-204ENST00000628202 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
DNMT3L-204ENST00000628202 FBLN2P98095 1184 aa23.91■■□□□ 1.42
DNMT3L-204ENST00000628202 SYNJ2O15056 1496 aa23.89■■□□□ 1.41
DNMT3L-204ENST00000628202 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
DNMT3L-204ENST00000628202 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
DNMT3L-204ENST00000628202 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
DNMT3L-204ENST00000628202 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
DNMT3L-204ENST00000628202 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
DNMT3L-204ENST00000628202 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
DNMT3L-204ENST00000628202 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
DNMT3L-204ENST00000628202 FHAD1B1AJZ9 1412 aa23.65■■□□□ 1.38
DNMT3L-204ENST00000628202 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
DNMT3L-204ENST00000628202 NUP160Q12769 1436 aa23.61■■□□□ 1.37
DNMT3L-204ENST00000628202 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
DNMT3L-204ENST00000628202 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
DNMT3L-204ENST00000628202 CUL7Q14999 1698 aa23.5■■□□□ 1.35
DNMT3L-204ENST00000628202 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
DNMT3L-204ENST00000628202 ERCC6L2Q5T890 1561 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms