RNA–Protein interactions for RNA: ENST00000292174.4

CXCR5-201, Transcript of C-X-C motif chemokine receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCR5, Length 4,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5-201ENST00000292174 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
CXCR5-201ENST00000292174 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
CXCR5-201ENST00000292174 SHROOM4Q9ULL8 1493 aa22.35■■□□□ 1.17
CXCR5-201ENST00000292174 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
CXCR5-201ENST00000292174 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
CXCR5-201ENST00000292174 MYT1Q01538 1121 aa21.75■■□□□ 1.07
CXCR5-201ENST00000292174 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
CXCR5-201ENST00000292174 ABCC9O60706 1549 aa21.44■■□□□ 1.02
CXCR5-201ENST00000292174 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
CXCR5-201ENST00000292174 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
CXCR5-201ENST00000292174 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
CXCR5-201ENST00000292174 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
CXCR5-201ENST00000292174 APLP2Q06481 763 aa20.73■□□□□ 0.91
CXCR5-201ENST00000292174 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
CXCR5-201ENST00000292174 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
CXCR5-201ENST00000292174 NACADO15069 1562 aa20.68■□□□□ 0.9
CXCR5-201ENST00000292174 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
CXCR5-201ENST00000292174 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
CXCR5-201ENST00000292174 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
CXCR5-201ENST00000292174 UBTFP17480 764 aaKnown RBP20.41■□□□□ 0.86
CXCR5-201ENST00000292174 HRCP23327 699 aa20.34■□□□□ 0.85
CXCR5-201ENST00000292174 TTBK1Q5TCY1 1321 aaPredicted RBP20.33■□□□□ 0.85
CXCR5-201ENST00000292174 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
CXCR5-201ENST00000292174 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
CXCR5-201ENST00000292174 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
CXCR5-201ENST00000292174 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
CXCR5-201ENST00000292174 RSF1Q96T23 1441 aaPredicted RBP20■□□□□ 0.79
CXCR5-201ENST00000292174 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
CXCR5-201ENST00000292174 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
CXCR5-201ENST00000292174 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
CXCR5-201ENST00000292174 LOC105371045A0A1W2PR82 267 aa19.89■□□□□ 0.77
CXCR5-201ENST00000292174 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
CXCR5-201ENST00000292174 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
CXCR5-201ENST00000292174 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
CXCR5-201ENST00000292174 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
CXCR5-201ENST00000292174 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
CXCR5-201ENST00000292174 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.73
CXCR5-201ENST00000292174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.73
CXCR5-201ENST00000292174 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.73
CXCR5-201ENST00000292174 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
CXCR5-201ENST00000292174 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
CXCR5-201ENST00000292174 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
CXCR5-201ENST00000292174 EEA1Q15075 1411 aa19.53■□□□□ 0.72
CXCR5-201ENST00000292174 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
CXCR5-201ENST00000292174 FBLN2P98095 1184 aa19.37■□□□□ 0.69
CXCR5-201ENST00000292174 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
CXCR5-201ENST00000292174 SMARCA4P51532 1647 aa19.33■□□□□ 0.68
CXCR5-201ENST00000292174 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
CXCR5-201ENST00000292174 ITGAEP38570 1179 aa19.3■□□□□ 0.68
CXCR5-201ENST00000292174 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
CXCR5-201ENST00000292174 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
CXCR5-201ENST00000292174 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
CXCR5-201ENST00000292174 WIZO95785 1651 aa19.22■□□□□ 0.67
CXCR5-201ENST00000292174 CDK11AQ9UQ88 783 aaPredicted RBP19.21■□□□□ 0.67
CXCR5-201ENST00000292174 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
CXCR5-201ENST00000292174 MYT1LQ9UL68 1186 aa19.2■□□□□ 0.66
CXCR5-201ENST00000292174 GOLGA3Q08378 1498 aa19.2■□□□□ 0.66
CXCR5-201ENST00000292174 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
CXCR5-201ENST00000292174 FAM50AQ14320 339 aaKnown RBP19.18■□□□□ 0.66
CXCR5-201ENST00000292174 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
CXCR5-201ENST00000292174 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
CXCR5-201ENST00000292174 P3H3Q8IVL6 736 aa19.13■□□□□ 0.65
CXCR5-201ENST00000292174 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
CXCR5-201ENST00000292174 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
CXCR5-201ENST00000292174 CLIP1P30622 1438 aa19.09■□□□□ 0.65
CXCR5-201ENST00000292174 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
CXCR5-201ENST00000292174 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.64
CXCR5-201ENST00000292174 NCAPD3P42695 1498 aa19.06■□□□□ 0.64
CXCR5-201ENST00000292174 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
CXCR5-201ENST00000292174 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
CXCR5-201ENST00000292174 CEP162Q5TB80 1403 aa18.97■□□□□ 0.63
CXCR5-201ENST00000292174 CUX2O14529 1486 aa18.95■□□□□ 0.62
CXCR5-201ENST00000292174 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
CXCR5-201ENST00000292174 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
CXCR5-201ENST00000292174 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
CXCR5-201ENST00000292174 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
CXCR5-201ENST00000292174 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
CXCR5-201ENST00000292174 SOGA1O94964 1423 aa18.87■□□□□ 0.61
CXCR5-201ENST00000292174 MTUS2Q5JR59 1369 aa18.85■□□□□ 0.61
CXCR5-201ENST00000292174 HMGXB3Q12766 1538 aa18.82■□□□□ 0.6
CXCR5-201ENST00000292174 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
CXCR5-201ENST00000292174 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
CXCR5-201ENST00000292174 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
CXCR5-201ENST00000292174 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
CXCR5-201ENST00000292174 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
CXCR5-201ENST00000292174 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
CXCR5-201ENST00000292174 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
CXCR5-201ENST00000292174 ANP32EQ9BTT0 268 aa18.69■□□□□ 0.58
CXCR5-201ENST00000292174 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
CXCR5-201ENST00000292174 NEFLP07196 543 aa18.67■□□□□ 0.58
CXCR5-201ENST00000292174 CFTRP13569 1480 aa18.66■□□□□ 0.58
CXCR5-201ENST00000292174 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
CXCR5-201ENST00000292174 RAPGEF2Q9Y4G8 1499 aa18.64■□□□□ 0.57
CXCR5-201ENST00000292174 TSPY4P0CV99 314 aa18.64■□□□□ 0.57
CXCR5-201ENST00000292174 TSPY10P0CW01 314 aa18.64■□□□□ 0.57
CXCR5-201ENST00000292174 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
CXCR5-201ENST00000292174 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
CXCR5-201ENST00000292174 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
CXCR5-201ENST00000292174 CARMIL2Q6F5E8 1435 aa18.59■□□□□ 0.57
CXCR5-201ENST00000292174 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms