RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
TNFRSF8-201ENST00000263932 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
TNFRSF8-201ENST00000263932 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
TNFRSF8-201ENST00000263932 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
TNFRSF8-201ENST00000263932 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
TNFRSF8-201ENST00000263932 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
TNFRSF8-201ENST00000263932 ABCC9O60706 1549 aa23.17■■□□□ 1.3
TNFRSF8-201ENST00000263932 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
TNFRSF8-201ENST00000263932 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
TNFRSF8-201ENST00000263932 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
TNFRSF8-201ENST00000263932 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
TNFRSF8-201ENST00000263932 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
TNFRSF8-201ENST00000263932 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.16
TNFRSF8-201ENST00000263932 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.14
TNFRSF8-201ENST00000263932 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
TNFRSF8-201ENST00000263932 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
TNFRSF8-201ENST00000263932 NACADO15069 1562 aa22.03■■□□□ 1.12
TNFRSF8-201ENST00000263932 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
TNFRSF8-201ENST00000263932 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF8-201ENST00000263932 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
TNFRSF8-201ENST00000263932 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
TNFRSF8-201ENST00000263932 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
TNFRSF8-201ENST00000263932 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
TNFRSF8-201ENST00000263932 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF8-201ENST00000263932 WIZO95785 1651 aa21.57■■□□□ 1.04
TNFRSF8-201ENST00000263932 RANGAP1P46060 587 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF8-201ENST00000263932 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF8-201ENST00000263932 HRCP23327 699 aa21.36■■□□□ 1.01
TNFRSF8-201ENST00000263932 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
TNFRSF8-201ENST00000263932 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
TNFRSF8-201ENST00000263932 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
TNFRSF8-201ENST00000263932 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
TNFRSF8-201ENST00000263932 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
TNFRSF8-201ENST00000263932 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
TNFRSF8-201ENST00000263932 BAZ1BQ9UIG0 1483 aaKnown RBP21.06■□□□□ 0.96
TNFRSF8-201ENST00000263932 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
TNFRSF8-201ENST00000263932 TRIM26Q12899 539 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF8-201ENST00000263932 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
TNFRSF8-201ENST00000263932 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
TNFRSF8-201ENST00000263932 SOGA1O94964 1423 aa20.95■□□□□ 0.94
TNFRSF8-201ENST00000263932 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
TNFRSF8-201ENST00000263932 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
TNFRSF8-201ENST00000263932 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.93
TNFRSF8-201ENST00000263932 APLP2Q06481 763 aa20.79■□□□□ 0.92
TNFRSF8-201ENST00000263932 ATP1B4Q9UN42 357 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-201ENST00000263932 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.91
TNFRSF8-201ENST00000263932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF8-201ENST00000263932 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF8-201ENST00000263932 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
TNFRSF8-201ENST00000263932 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
TNFRSF8-201ENST00000263932 CEP162Q5TB80 1403 aa20.59■□□□□ 0.89
TNFRSF8-201ENST00000263932 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
TNFRSF8-201ENST00000263932 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
TNFRSF8-201ENST00000263932 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
TNFRSF8-201ENST00000263932 ITGAEP38570 1179 aa20.49■□□□□ 0.87
TNFRSF8-201ENST00000263932 PEG3Q9GZU2 1588 aa20.44■□□□□ 0.86
TNFRSF8-201ENST00000263932 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
TNFRSF8-201ENST00000263932 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
TNFRSF8-201ENST00000263932 TNIKQ9UKE5 1360 aa20.43■□□□□ 0.86
TNFRSF8-201ENST00000263932 CLIP1P30622 1438 aa20.4■□□□□ 0.86
TNFRSF8-201ENST00000263932 EEA1Q15075 1411 aa20.4■□□□□ 0.86
TNFRSF8-201ENST00000263932 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
TNFRSF8-201ENST00000263932 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
TNFRSF8-201ENST00000263932 RAPGEF2Q9Y4G8 1499 aa20.37■□□□□ 0.85
TNFRSF8-201ENST00000263932 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
TNFRSF8-201ENST00000263932 NESP48681 1621 aa20.33■□□□□ 0.84
TNFRSF8-201ENST00000263932 CUX2O14529 1486 aa20.3■□□□□ 0.84
TNFRSF8-201ENST00000263932 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF8-201ENST00000263932 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
TNFRSF8-201ENST00000263932 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
TNFRSF8-201ENST00000263932 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
TNFRSF8-201ENST00000263932 CFTRP13569 1480 aa20.25■□□□□ 0.83
TNFRSF8-201ENST00000263932 CUX1P39880 1505 aa20.22■□□□□ 0.83
TNFRSF8-201ENST00000263932 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
TNFRSF8-201ENST00000263932 FBLN2P98095 1184 aa20.17■□□□□ 0.82
TNFRSF8-201ENST00000263932 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
TNFRSF8-201ENST00000263932 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.82
TNFRSF8-201ENST00000263932 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF8-201ENST00000263932 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
TNFRSF8-201ENST00000263932 CARMIL1Q5VZK9 1371 aa20.12■□□□□ 0.81
TNFRSF8-201ENST00000263932 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
TNFRSF8-201ENST00000263932 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
TNFRSF8-201ENST00000263932 IGF1RP08069 1367 aa20.05■□□□□ 0.8
TNFRSF8-201ENST00000263932 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
TNFRSF8-201ENST00000263932 DIEXFQ68CQ4 756 aaKnown RBP20.03■□□□□ 0.8
TNFRSF8-201ENST00000263932 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
TNFRSF8-201ENST00000263932 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
TNFRSF8-201ENST00000263932 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
TNFRSF8-201ENST00000263932 KIF21BO75037 1637 aa19.93■□□□□ 0.78
TNFRSF8-201ENST00000263932 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
TNFRSF8-201ENST00000263932 GTF3C3Q9Y5Q9 886 aa19.91■□□□□ 0.78
TNFRSF8-201ENST00000263932 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
TNFRSF8-201ENST00000263932 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
TNFRSF8-201ENST00000263932 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF8-201ENST00000263932 TOPBP1Q92547 1522 aa19.87■□□□□ 0.77
TNFRSF8-201ENST00000263932 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
TNFRSF8-201ENST00000263932 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
TNFRSF8-201ENST00000263932 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
TNFRSF8-201ENST00000263932 FHOD3Q2V2M9 1422 aa19.84■□□□□ 0.77
TNFRSF8-201ENST00000263932 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms