RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
LINC02171-201ENST00000508619 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
LINC02171-201ENST00000508619 ABCC9O60706 1549 aa29.57■■■□□ 2.32
LINC02171-201ENST00000508619 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
LINC02171-201ENST00000508619 NACADO15069 1562 aa28.32■■■□□ 2.12
LINC02171-201ENST00000508619 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
LINC02171-201ENST00000508619 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
LINC02171-201ENST00000508619 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
LINC02171-201ENST00000508619 DCAF1Q9Y4B6 1507 aa27.83■■■□□ 2.05
LINC02171-201ENST00000508619 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
LINC02171-201ENST00000508619 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 2
LINC02171-201ENST00000508619 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
LINC02171-201ENST00000508619 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
LINC02171-201ENST00000508619 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
LINC02171-201ENST00000508619 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
LINC02171-201ENST00000508619 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
LINC02171-201ENST00000508619 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
LINC02171-201ENST00000508619 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
LINC02171-201ENST00000508619 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
LINC02171-201ENST00000508619 SMARCA4P51532 1647 aa26.07■■□□□ 1.76
LINC02171-201ENST00000508619 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
LINC02171-201ENST00000508619 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
LINC02171-201ENST00000508619 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
LINC02171-201ENST00000508619 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
LINC02171-201ENST00000508619 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
LINC02171-201ENST00000508619 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
LINC02171-201ENST00000508619 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
LINC02171-201ENST00000508619 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
LINC02171-201ENST00000508619 CUX2O14529 1486 aa25.53■■□□□ 1.68
LINC02171-201ENST00000508619 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
LINC02171-201ENST00000508619 NESP48681 1621 aa25.48■■□□□ 1.67
LINC02171-201ENST00000508619 WIZO95785 1651 aa25.43■■□□□ 1.66
LINC02171-201ENST00000508619 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
LINC02171-201ENST00000508619 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
LINC02171-201ENST00000508619 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
LINC02171-201ENST00000508619 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
LINC02171-201ENST00000508619 TOP2AP11388 1531 aaKnown RBP25.24■■□□□ 1.63
LINC02171-201ENST00000508619 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
LINC02171-201ENST00000508619 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
LINC02171-201ENST00000508619 CFTRP13569 1480 aa25.11■■□□□ 1.61
LINC02171-201ENST00000508619 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
LINC02171-201ENST00000508619 WDR62O43379 1518 aa25.02■■□□□ 1.6
LINC02171-201ENST00000508619 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
LINC02171-201ENST00000508619 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
LINC02171-201ENST00000508619 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.58
LINC02171-201ENST00000508619 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
LINC02171-201ENST00000508619 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
LINC02171-201ENST00000508619 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
LINC02171-201ENST00000508619 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
LINC02171-201ENST00000508619 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
LINC02171-201ENST00000508619 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
LINC02171-201ENST00000508619 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
LINC02171-201ENST00000508619 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
LINC02171-201ENST00000508619 POLA1P09884 1462 aaPredicted RBP24.32■■□□□ 1.48
LINC02171-201ENST00000508619 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
LINC02171-201ENST00000508619 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
LINC02171-201ENST00000508619 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
LINC02171-201ENST00000508619 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
LINC02171-201ENST00000508619 CUX1P39880 1505 aa24.21■■□□□ 1.47
LINC02171-201ENST00000508619 SOGA1O94964 1423 aa24.2■■□□□ 1.46
LINC02171-201ENST00000508619 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
LINC02171-201ENST00000508619 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.46
LINC02171-201ENST00000508619 RAD54L2Q9Y4B4 1467 aa24.16■■□□□ 1.46
LINC02171-201ENST00000508619 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
LINC02171-201ENST00000508619 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
LINC02171-201ENST00000508619 GRIN2BQ13224 1484 aa24■■□□□ 1.43
LINC02171-201ENST00000508619 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
LINC02171-201ENST00000508619 CHD1O14646 1710 aa24■■□□□ 1.43
LINC02171-201ENST00000508619 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
LINC02171-201ENST00000508619 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
LINC02171-201ENST00000508619 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.42
LINC02171-201ENST00000508619 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.42
LINC02171-201ENST00000508619 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
LINC02171-201ENST00000508619 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.42
LINC02171-201ENST00000508619 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
LINC02171-201ENST00000508619 BIVM-ERCC5R4GMW8 1640 aa23.94■■□□□ 1.42
LINC02171-201ENST00000508619 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
LINC02171-201ENST00000508619 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
LINC02171-201ENST00000508619 ABCA5Q8WWZ7 1642 aa23.91■■□□□ 1.42
LINC02171-201ENST00000508619 SYNJ2O15056 1496 aa23.89■■□□□ 1.42
LINC02171-201ENST00000508619 FBLN2P98095 1184 aa23.89■■□□□ 1.41
LINC02171-201ENST00000508619 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
LINC02171-201ENST00000508619 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
LINC02171-201ENST00000508619 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
LINC02171-201ENST00000508619 CLASP1Q7Z460 1538 aa23.83■■□□□ 1.41
LINC02171-201ENST00000508619 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
LINC02171-201ENST00000508619 ERICH3Q5RHP9 1530 aa23.71■■□□□ 1.39
LINC02171-201ENST00000508619 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
LINC02171-201ENST00000508619 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
LINC02171-201ENST00000508619 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
LINC02171-201ENST00000508619 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
LINC02171-201ENST00000508619 NUP160Q12769 1436 aa23.63■■□□□ 1.37
LINC02171-201ENST00000508619 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
LINC02171-201ENST00000508619 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
LINC02171-201ENST00000508619 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
LINC02171-201ENST00000508619 IGF1RP08069 1367 aa23.42■■□□□ 1.34
LINC02171-201ENST00000508619 CUL7Q14999 1698 aa23.4■■□□□ 1.34
LINC02171-201ENST00000508619 ERCC6L2Q5T890 1561 aa23.36■■□□□ 1.33
LINC02171-201ENST00000508619 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
LINC02171-201ENST00000508619 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms