RNA–Protein interactions for RNA: ENST00000397647.7

PAX8-204, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-204ENST00000397647 NISCHQ9Y2I1 1504 aa26.2■■□□□ 1.78
PAX8-204ENST00000397647 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.36
PAX8-204ENST00000397647 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
PAX8-204ENST00000397647 HRCP23327 699 aa22.77■■□□□ 1.24
PAX8-204ENST00000397647 PCGF6Q9BYE7 350 aa22.75■■□□□ 1.23
PAX8-204ENST00000397647 PPARGC1BQ86YN6 1023 aaKnown RBP22.69■■□□□ 1.22
PAX8-204ENST00000397647 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
PAX8-204ENST00000397647 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
PAX8-204ENST00000397647 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
PAX8-204ENST00000397647 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.16
PAX8-204ENST00000397647 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
PAX8-204ENST00000397647 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
PAX8-204ENST00000397647 TRIM26Q12899 539 aaPredicted RBP21.82■■□□□ 1.08
PAX8-204ENST00000397647 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
PAX8-204ENST00000397647 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
PAX8-204ENST00000397647 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
PAX8-204ENST00000397647 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
PAX8-204ENST00000397647 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
PAX8-204ENST00000397647 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
PAX8-204ENST00000397647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
PAX8-204ENST00000397647 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
PAX8-204ENST00000397647 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
PAX8-204ENST00000397647 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
PAX8-204ENST00000397647 NEUROD1Q13562 356 aa21.08■□□□□ 0.96
PAX8-204ENST00000397647 CCER1Q8TC90 406 aaPredicted RBP21.06■□□□□ 0.96
PAX8-204ENST00000397647 SCRIBQ14160 1630 aa21■□□□□ 0.95
PAX8-204ENST00000397647 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
PAX8-204ENST00000397647 ABCC9O60706 1549 aa20.99■□□□□ 0.95
PAX8-204ENST00000397647 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
PAX8-204ENST00000397647 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
PAX8-204ENST00000397647 DIEXFQ68CQ4 756 aaKnown RBP20.87■□□□□ 0.93
PAX8-204ENST00000397647 YTHDC1Q96MU7 727 aaKnown RBP20.78■□□□□ 0.92
PAX8-204ENST00000397647 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
PAX8-204ENST00000397647 CENPBP07199 599 aaPredicted RBP20.69■□□□□ 0.9
PAX8-204ENST00000397647 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
PAX8-204ENST00000397647 WIZO95785 1651 aa20.52■□□□□ 0.88
PAX8-204ENST00000397647 UBTFP17480 764 aaKnown RBP20.48■□□□□ 0.87
PAX8-204ENST00000397647 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
PAX8-204ENST00000397647 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
PAX8-204ENST00000397647 MIER1Q8N108 512 aa20.44■□□□□ 0.86
PAX8-204ENST00000397647 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
PAX8-204ENST00000397647 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
PAX8-204ENST00000397647 RANGAP1P46060 587 aaPredicted RBP20.38■□□□□ 0.85
PAX8-204ENST00000397647 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
PAX8-204ENST00000397647 SOGA1O94964 1423 aa20.36■□□□□ 0.85
PAX8-204ENST00000397647 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
PAX8-204ENST00000397647 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
PAX8-204ENST00000397647 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
PAX8-204ENST00000397647 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
PAX8-204ENST00000397647 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
PAX8-204ENST00000397647 MYT1Q01538 1121 aa20.11■□□□□ 0.81
PAX8-204ENST00000397647 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
PAX8-204ENST00000397647 NACADO15069 1562 aa20.03■□□□□ 0.8
PAX8-204ENST00000397647 APLP2Q06481 763 aa20■□□□□ 0.79
PAX8-204ENST00000397647 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
PAX8-204ENST00000397647 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
PAX8-204ENST00000397647 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
PAX8-204ENST00000397647 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
PAX8-204ENST00000397647 SUPT16HQ9Y5B9 1047 aaKnown RBP19.9■□□□□ 0.78
PAX8-204ENST00000397647 CLIP1P30622 1438 aa19.88■□□□□ 0.77
PAX8-204ENST00000397647 ITGAEP38570 1179 aa19.85■□□□□ 0.77
PAX8-204ENST00000397647 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
PAX8-204ENST00000397647 BCANQ96GW7 911 aa19.82■□□□□ 0.76
PAX8-204ENST00000397647 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
PAX8-204ENST00000397647 EEA1Q15075 1411 aa19.8■□□□□ 0.76
PAX8-204ENST00000397647 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
PAX8-204ENST00000397647 RAPGEF2Q9Y4G8 1499 aa19.74■□□□□ 0.75
PAX8-204ENST00000397647 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
PAX8-204ENST00000397647 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
PAX8-204ENST00000397647 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
PAX8-204ENST00000397647 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
PAX8-204ENST00000397647 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
PAX8-204ENST00000397647 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
PAX8-204ENST00000397647 KIF21BO75037 1637 aa19.6■□□□□ 0.73
PAX8-204ENST00000397647 FKBP8Q14318 412 aa19.56■□□□□ 0.72
PAX8-204ENST00000397647 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
PAX8-204ENST00000397647 ANP32EQ9BTT0 268 aa19.53■□□□□ 0.72
PAX8-204ENST00000397647 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
PAX8-204ENST00000397647 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
PAX8-204ENST00000397647 TRIM52Q96A61 297 aa19.48■□□□□ 0.71
PAX8-204ENST00000397647 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
PAX8-204ENST00000397647 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
PAX8-204ENST00000397647 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
PAX8-204ENST00000397647 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.69
PAX8-204ENST00000397647 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
PAX8-204ENST00000397647 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
PAX8-204ENST00000397647 RAB3GAP2Q9H2M9 1393 aa19.35■□□□□ 0.69
PAX8-204ENST00000397647 BCL11AQ9H165 835 aa19.34■□□□□ 0.69
PAX8-204ENST00000397647 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
PAX8-204ENST00000397647 P3H3Q8IVL6 736 aa19.32■□□□□ 0.68
PAX8-204ENST00000397647 IRX6P78412 446 aaPredicted RBP19.29■□□□□ 0.68
PAX8-204ENST00000397647 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
PAX8-204ENST00000397647 RRBP1Q9P2E9 1410 aaKnown RBP19.28■□□□□ 0.68
PAX8-204ENST00000397647 NEFLP07196 543 aa19.27■□□□□ 0.68
PAX8-204ENST00000397647 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
PAX8-204ENST00000397647 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
PAX8-204ENST00000397647 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
PAX8-204ENST00000397647 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
PAX8-204ENST00000397647 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
PAX8-204ENST00000397647 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms