RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 NISCHQ9Y2I1 1504 aa32.31■■■□□ 2.76
SNX11-210ENST00000582104 ABCC9O60706 1549 aa30.17■■■□□ 2.42
SNX11-210ENST00000582104 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
SNX11-210ENST00000582104 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
SNX11-210ENST00000582104 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
SNX11-210ENST00000582104 NACADO15069 1562 aa27.94■■■□□ 2.06
SNX11-210ENST00000582104 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.06
SNX11-210ENST00000582104 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
SNX11-210ENST00000582104 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
SNX11-210ENST00000582104 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
SNX11-210ENST00000582104 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
SNX11-210ENST00000582104 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
SNX11-210ENST00000582104 DNAJC5Q9H3Z4 198 aa27.26■■□□□ 1.95
SNX11-210ENST00000582104 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
SNX11-210ENST00000582104 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
SNX11-210ENST00000582104 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
SNX11-210ENST00000582104 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
SNX11-210ENST00000582104 DCAF1Q9Y4B6 1507 aa26.64■■□□□ 1.85
SNX11-210ENST00000582104 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
SNX11-210ENST00000582104 CUX2O14529 1486 aa26.35■■□□□ 1.81
SNX11-210ENST00000582104 AEBP2Q6ZN18 517 aaPredicted RBP26.18■■□□□ 1.78
SNX11-210ENST00000582104 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
SNX11-210ENST00000582104 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
SNX11-210ENST00000582104 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
SNX11-210ENST00000582104 NESP48681 1621 aa25.7■■□□□ 1.7
SNX11-210ENST00000582104 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.69
SNX11-210ENST00000582104 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
SNX11-210ENST00000582104 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
SNX11-210ENST00000582104 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
SNX11-210ENST00000582104 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
SNX11-210ENST00000582104 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
SNX11-210ENST00000582104 LAMC3Q9Y6N6 1575 aa25.37■■□□□ 1.65
SNX11-210ENST00000582104 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
SNX11-210ENST00000582104 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
SNX11-210ENST00000582104 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
SNX11-210ENST00000582104 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
SNX11-210ENST00000582104 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
SNX11-210ENST00000582104 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
SNX11-210ENST00000582104 WDR62O43379 1518 aa25.07■■□□□ 1.6
SNX11-210ENST00000582104 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
SNX11-210ENST00000582104 OSCARQ8IYS5 282 aa24.94■■□□□ 1.58
SNX11-210ENST00000582104 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
SNX11-210ENST00000582104 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
SNX11-210ENST00000582104 RIMBP3CA6NJZ7 1639 aa24.8■■□□□ 1.56
SNX11-210ENST00000582104 RIMBP3BA6NNM3 1639 aa24.8■■□□□ 1.56
SNX11-210ENST00000582104 RIMBP3Q9UFD9 1639 aa24.8■■□□□ 1.56
SNX11-210ENST00000582104 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
SNX11-210ENST00000582104 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
SNX11-210ENST00000582104 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
SNX11-210ENST00000582104 WIZO95785 1651 aa24.56■■□□□ 1.52
SNX11-210ENST00000582104 CFTRP13569 1480 aa24.53■■□□□ 1.52
SNX11-210ENST00000582104 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
SNX11-210ENST00000582104 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
SNX11-210ENST00000582104 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
SNX11-210ENST00000582104 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
SNX11-210ENST00000582104 ARAP1Q96P48 1450 aa24.33■■□□□ 1.49
SNX11-210ENST00000582104 PRDM2Q13029 1718 aa24.26■■□□□ 1.47
SNX11-210ENST00000582104 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
SNX11-210ENST00000582104 CHD1O14646 1710 aa24.24■■□□□ 1.47
SNX11-210ENST00000582104 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
SNX11-210ENST00000582104 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
SNX11-210ENST00000582104 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
SNX11-210ENST00000582104 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.44
SNX11-210ENST00000582104 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
SNX11-210ENST00000582104 FBLN2P98095 1184 aa24.02■■□□□ 1.44
SNX11-210ENST00000582104 ABCC8Q09428 1581 aa24■■□□□ 1.43
SNX11-210ENST00000582104 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
SNX11-210ENST00000582104 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
SNX11-210ENST00000582104 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
SNX11-210ENST00000582104 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
SNX11-210ENST00000582104 SYNJ1O43426 1573 aa23.81■■□□□ 1.4
SNX11-210ENST00000582104 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
SNX11-210ENST00000582104 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
SNX11-210ENST00000582104 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
SNX11-210ENST00000582104 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
SNX11-210ENST00000582104 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
SNX11-210ENST00000582104 WDR97A6NE52 1622 aa23.7■■□□□ 1.39
SNX11-210ENST00000582104 CHMP7Q8WUX9 453 aaPredicted RBP23.7■■□□□ 1.38
SNX11-210ENST00000582104 MAGI1Q96QZ7 1491 aaPredicted RBP23.69■■□□□ 1.38
SNX11-210ENST00000582104 SOGA1O94964 1423 aa23.69■■□□□ 1.38
SNX11-210ENST00000582104 SYNJ2O15056 1496 aa23.63■■□□□ 1.37
SNX11-210ENST00000582104 GRIN2BQ13224 1484 aa23.6■■□□□ 1.37
SNX11-210ENST00000582104 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
SNX11-210ENST00000582104 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
SNX11-210ENST00000582104 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
SNX11-210ENST00000582104 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
SNX11-210ENST00000582104 CUX1P39880 1505 aa23.44■■□□□ 1.34
SNX11-210ENST00000582104 ILDR1Q86SU0 546 aaPredicted RBP23.42■■□□□ 1.34
SNX11-210ENST00000582104 CEP170Q5SW79 1584 aa23.37■■□□□ 1.33
SNX11-210ENST00000582104 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
SNX11-210ENST00000582104 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
SNX11-210ENST00000582104 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
SNX11-210ENST00000582104 NUP160Q12769 1436 aa23.27■■□□□ 1.32
SNX11-210ENST00000582104 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
SNX11-210ENST00000582104 KDM4FA0A1W2PPD8 638 aa23.26■■□□□ 1.31
SNX11-210ENST00000582104 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
SNX11-210ENST00000582104 ABCC10Q5T3U5 1492 aa23.18■■□□□ 1.3
SNX11-210ENST00000582104 FAM69CQ0P6D2 419 aa23.16■■□□□ 1.3
SNX11-210ENST00000582104 KDM6BO15054 1643 aa23.15■■□□□ 1.3
SNX11-210ENST00000582104 DIP2BQ9P265 1576 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms