Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 AL627231.1-201ENST00000394467 1125 ntBASIC14.16□□□□□ -0.14
HDAC11Q96DB2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 AC092506.1-202ENST00000401022 528 ntBASIC14.16□□□□□ -0.14
HDAC11Q96DB2 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 CEP164P1-201ENST00000455142 418 ntBASIC14.16□□□□□ -0.14
HDAC11Q96DB2 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 CHMP4BP1-201ENST00000556017 588 ntBASIC14.16□□□□□ -0.14
HDAC11Q96DB2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 AP005264.5-201ENST00000590066 467 ntBASIC14.16□□□□□ -0.14
HDAC11Q96DB2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 AC008040.5-201ENST00000599781 1781 ntBASIC14.16□□□□□ -0.14
HDAC11Q96DB2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 ODCP-201ENST00000459650 1639 ntBASIC14.15□□□□□ -0.14
HDAC11Q96DB2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 PYY2-201ENST00000315776 282 ntBASIC14.15□□□□□ -0.14
HDAC11Q96DB2 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 GRPEL2P1-201ENST00000453145 339 ntBASIC14.15□□□□□ -0.14
HDAC11Q96DB2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 FGFR3P5-201ENST00000564496 886 ntBASIC14.15□□□□□ -0.14
HDAC11Q96DB2 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDAC11Q96DB2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
HDAC11Q96DB2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.15□□□□□ -0.15
HDAC11Q96DB2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms