RNA–Protein interactions for RNA: ENST00000345330.8

NPTN-201, Transcript of neuroplastin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPTN, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-201ENST00000345330 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.43
NPTN-201ENST00000345330 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
NPTN-201ENST00000345330 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
NPTN-201ENST00000345330 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
NPTN-201ENST00000345330 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
NPTN-201ENST00000345330 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
NPTN-201ENST00000345330 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
NPTN-201ENST00000345330 ABCC9O60706 1549 aa24.45■■□□□ 1.51
NPTN-201ENST00000345330 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
NPTN-201ENST00000345330 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
NPTN-201ENST00000345330 NACADO15069 1562 aa24.07■■□□□ 1.44
NPTN-201ENST00000345330 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
NPTN-201ENST00000345330 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
NPTN-201ENST00000345330 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.38
NPTN-201ENST00000345330 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
NPTN-201ENST00000345330 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
NPTN-201ENST00000345330 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
NPTN-201ENST00000345330 WIZO95785 1651 aa23.32■■□□□ 1.32
NPTN-201ENST00000345330 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.31
NPTN-201ENST00000345330 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
NPTN-201ENST00000345330 BAZ1AQ9NRL2 1556 aaPredicted RBP23.21■■□□□ 1.31
NPTN-201ENST00000345330 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
NPTN-201ENST00000345330 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
NPTN-201ENST00000345330 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
NPTN-201ENST00000345330 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
NPTN-201ENST00000345330 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
NPTN-201ENST00000345330 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
NPTN-201ENST00000345330 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
NPTN-201ENST00000345330 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
NPTN-201ENST00000345330 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
NPTN-201ENST00000345330 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
NPTN-201ENST00000345330 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
NPTN-201ENST00000345330 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
NPTN-201ENST00000345330 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
NPTN-201ENST00000345330 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
NPTN-201ENST00000345330 NCAPD3P42695 1498 aa22.29■■□□□ 1.16
NPTN-201ENST00000345330 SOGA1O94964 1423 aa22.27■■□□□ 1.16
NPTN-201ENST00000345330 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
NPTN-201ENST00000345330 WRNQ14191 1432 aaPredicted RBP eCLIP22.24■■□□□ 1.15
NPTN-201ENST00000345330 RUSC2Q8N2Y8 1516 aa22.22■■□□□ 1.15
NPTN-201ENST00000345330 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
NPTN-201ENST00000345330 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
NPTN-201ENST00000345330 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.12
NPTN-201ENST00000345330 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
NPTN-201ENST00000345330 EEA1Q15075 1411 aa21.98■■□□□ 1.11
NPTN-201ENST00000345330 CFTRP13569 1480 aa21.97■■□□□ 1.11
NPTN-201ENST00000345330 TOP2BQ02880 1626 aa21.95■■□□□ 1.11
NPTN-201ENST00000345330 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
NPTN-201ENST00000345330 HRCP23327 699 aa21.93■■□□□ 1.1
NPTN-201ENST00000345330 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
NPTN-201ENST00000345330 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
NPTN-201ENST00000345330 CUX1P39880 1505 aa21.89■■□□□ 1.09
NPTN-201ENST00000345330 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
NPTN-201ENST00000345330 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
NPTN-201ENST00000345330 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
NPTN-201ENST00000345330 GOLGA3Q08378 1498 aa21.83■■□□□ 1.08
NPTN-201ENST00000345330 CADPSQ9ULU8 1353 aa21.81■■□□□ 1.08
NPTN-201ENST00000345330 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
NPTN-201ENST00000345330 KIF21BO75037 1637 aa21.77■■□□□ 1.07
NPTN-201ENST00000345330 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
NPTN-201ENST00000345330 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
NPTN-201ENST00000345330 NESP48681 1621 aa21.67■■□□□ 1.06
NPTN-201ENST00000345330 TTBK1Q5TCY1 1321 aaPredicted RBP21.63■■□□□ 1.05
NPTN-201ENST00000345330 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
NPTN-201ENST00000345330 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
NPTN-201ENST00000345330 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
NPTN-201ENST00000345330 CLIP1P30622 1438 aa21.57■■□□□ 1.04
NPTN-201ENST00000345330 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
NPTN-201ENST00000345330 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
NPTN-201ENST00000345330 CUX2O14529 1486 aa21.51■■□□□ 1.03
NPTN-201ENST00000345330 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
NPTN-201ENST00000345330 IGF1RP08069 1367 aa21.44■■□□□ 1.02
NPTN-201ENST00000345330 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
NPTN-201ENST00000345330 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
NPTN-201ENST00000345330 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
NPTN-201ENST00000345330 VPS8Q8N3P4 1428 aa21.41■■□□□ 1.02
NPTN-201ENST00000345330 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
NPTN-201ENST00000345330 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
NPTN-201ENST00000345330 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
NPTN-201ENST00000345330 ARAP1Q96P48 1450 aa21.35■■□□□ 1.01
NPTN-201ENST00000345330 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
NPTN-201ENST00000345330 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
NPTN-201ENST00000345330 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
NPTN-201ENST00000345330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
NPTN-201ENST00000345330 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
NPTN-201ENST00000345330 ARHGAP35Q9NRY4 1499 aa21.25■□□□□ 0.99
NPTN-201ENST00000345330 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
NPTN-201ENST00000345330 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
NPTN-201ENST00000345330 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
NPTN-201ENST00000345330 APLP2Q06481 763 aa21.16■□□□□ 0.98
NPTN-201ENST00000345330 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
NPTN-201ENST00000345330 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
NPTN-201ENST00000345330 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
NPTN-201ENST00000345330 HNRNPUL2Q1KMD3 747 aaKnown RBP21.07■□□□□ 0.96
NPTN-201ENST00000345330 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
NPTN-201ENST00000345330 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
NPTN-201ENST00000345330 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
NPTN-201ENST00000345330 CUL7Q14999 1698 aa21.05■□□□□ 0.96
NPTN-201ENST00000345330 MRC2Q9UBG0 1479 aa21■□□□□ 0.95
NPTN-201ENST00000345330 FHOD3Q2V2M9 1422 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms