RNA–Protein interactions for RNA: ENST00000556815.5

LINC01500-204, Transcript of long intergenic non-protein coding RNA 1500, humanhuman

TSL 3 BASIC

Gene LINC01500, Length 752 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01500-204ENST00000556815 NISCHQ9Y2I1 1504 aa33.77■■■■□ 3
LINC01500-204ENST00000556815 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.41
LINC01500-204ENST00000556815 ABCC9O60706 1549 aa29.15■■■□□ 2.26
LINC01500-204ENST00000556815 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
LINC01500-204ENST00000556815 NACADO15069 1562 aa28.24■■■□□ 2.11
LINC01500-204ENST00000556815 ZCCHC6Q5VYS8 1495 aaKnown RBP28.19■■■□□ 2.1
LINC01500-204ENST00000556815 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
LINC01500-204ENST00000556815 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
LINC01500-204ENST00000556815 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
LINC01500-204ENST00000556815 UNC13AQ9UPW8 1703 aa27.63■■■□□ 2.01
LINC01500-204ENST00000556815 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
LINC01500-204ENST00000556815 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
LINC01500-204ENST00000556815 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
LINC01500-204ENST00000556815 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
LINC01500-204ENST00000556815 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
LINC01500-204ENST00000556815 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
LINC01500-204ENST00000556815 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
LINC01500-204ENST00000556815 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
LINC01500-204ENST00000556815 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
LINC01500-204ENST00000556815 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
LINC01500-204ENST00000556815 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
LINC01500-204ENST00000556815 PEG3Q9GZU2 1588 aa26■■□□□ 1.75
LINC01500-204ENST00000556815 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
LINC01500-204ENST00000556815 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
LINC01500-204ENST00000556815 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
LINC01500-204ENST00000556815 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
LINC01500-204ENST00000556815 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
LINC01500-204ENST00000556815 WIZO95785 1651 aa25.74■■□□□ 1.71
LINC01500-204ENST00000556815 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
LINC01500-204ENST00000556815 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
LINC01500-204ENST00000556815 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
LINC01500-204ENST00000556815 NESP48681 1621 aa25.25■■□□□ 1.63
LINC01500-204ENST00000556815 ERCC6Q03468 1493 aa25.2■■□□□ 1.62
LINC01500-204ENST00000556815 CADPSQ9ULU8 1353 aa25.19■■□□□ 1.62
LINC01500-204ENST00000556815 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
LINC01500-204ENST00000556815 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
LINC01500-204ENST00000556815 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
LINC01500-204ENST00000556815 CFTRP13569 1480 aa25.1■■□□□ 1.61
LINC01500-204ENST00000556815 KIF21AQ7Z4S6 1674 aa25.09■■□□□ 1.61
LINC01500-204ENST00000556815 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
LINC01500-204ENST00000556815 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
LINC01500-204ENST00000556815 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
LINC01500-204ENST00000556815 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
LINC01500-204ENST00000556815 CUX2O14529 1486 aa24.93■■□□□ 1.58
LINC01500-204ENST00000556815 MRC2Q9UBG0 1479 aa24.86■■□□□ 1.57
LINC01500-204ENST00000556815 WDR62O43379 1518 aa24.81■■□□□ 1.56
LINC01500-204ENST00000556815 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
LINC01500-204ENST00000556815 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
LINC01500-204ENST00000556815 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
LINC01500-204ENST00000556815 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
LINC01500-204ENST00000556815 CUX1P39880 1505 aa24.4■■□□□ 1.5
LINC01500-204ENST00000556815 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
LINC01500-204ENST00000556815 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
LINC01500-204ENST00000556815 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
LINC01500-204ENST00000556815 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
LINC01500-204ENST00000556815 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
LINC01500-204ENST00000556815 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
LINC01500-204ENST00000556815 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
LINC01500-204ENST00000556815 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
LINC01500-204ENST00000556815 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
LINC01500-204ENST00000556815 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
LINC01500-204ENST00000556815 SOGA1O94964 1423 aa24.2■■□□□ 1.46
LINC01500-204ENST00000556815 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
LINC01500-204ENST00000556815 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
LINC01500-204ENST00000556815 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
LINC01500-204ENST00000556815 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
LINC01500-204ENST00000556815 AQRO60306 1485 aaKnown RBP eCLIP24.04■■□□□ 1.44
LINC01500-204ENST00000556815 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
LINC01500-204ENST00000556815 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
LINC01500-204ENST00000556815 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
LINC01500-204ENST00000556815 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
LINC01500-204ENST00000556815 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
LINC01500-204ENST00000556815 CHD1O14646 1710 aa23.91■■□□□ 1.42
LINC01500-204ENST00000556815 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
LINC01500-204ENST00000556815 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
LINC01500-204ENST00000556815 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
LINC01500-204ENST00000556815 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
LINC01500-204ENST00000556815 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
LINC01500-204ENST00000556815 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
LINC01500-204ENST00000556815 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
LINC01500-204ENST00000556815 CUL7Q14999 1698 aa23.72■■□□□ 1.39
LINC01500-204ENST00000556815 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
LINC01500-204ENST00000556815 FBLN2P98095 1184 aa23.71■■□□□ 1.39
LINC01500-204ENST00000556815 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
LINC01500-204ENST00000556815 CHMP7Q8WUX9 453 aaPredicted RBP23.7■■□□□ 1.38
LINC01500-204ENST00000556815 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
LINC01500-204ENST00000556815 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
LINC01500-204ENST00000556815 IGF1RP08069 1367 aa23.58■■□□□ 1.37
LINC01500-204ENST00000556815 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
LINC01500-204ENST00000556815 NUP160Q12769 1436 aa23.54■■□□□ 1.36
LINC01500-204ENST00000556815 RIMBP3CA6NJZ7 1639 aa23.49■■□□□ 1.35
LINC01500-204ENST00000556815 RIMBP3BA6NNM3 1639 aa23.49■■□□□ 1.35
LINC01500-204ENST00000556815 RIMBP3Q9UFD9 1639 aa23.49■■□□□ 1.35
LINC01500-204ENST00000556815 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
LINC01500-204ENST00000556815 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
LINC01500-204ENST00000556815 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
LINC01500-204ENST00000556815 EEA1Q15075 1411 aa23.45■■□□□ 1.34
LINC01500-204ENST00000556815 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
LINC01500-204ENST00000556815 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
LINC01500-204ENST00000556815 RAPGEF2Q9Y4G8 1499 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms