RNA–Protein interactions for RNA: ENST00000367154.5

LEMD1-205, Transcript of LEM domain containing 1, humanhuman

TSL 2 BASIC

Gene LEMD1, Length 786 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-205ENST00000367154 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
LEMD1-205ENST00000367154 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
LEMD1-205ENST00000367154 ABCC9O60706 1549 aa29.12■■■□□ 2.25
LEMD1-205ENST00000367154 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
LEMD1-205ENST00000367154 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
LEMD1-205ENST00000367154 NACADO15069 1562 aa28.03■■■□□ 2.08
LEMD1-205ENST00000367154 ZCCHC6Q5VYS8 1495 aaKnown RBP27.98■■■□□ 2.07
LEMD1-205ENST00000367154 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
LEMD1-205ENST00000367154 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
LEMD1-205ENST00000367154 UNC13AQ9UPW8 1703 aa27.31■■□□□ 1.96
LEMD1-205ENST00000367154 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
LEMD1-205ENST00000367154 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
LEMD1-205ENST00000367154 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
LEMD1-205ENST00000367154 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
LEMD1-205ENST00000367154 DNAJC5BQ9UF47 199 aa26.58■■□□□ 1.85
LEMD1-205ENST00000367154 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
LEMD1-205ENST00000367154 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
LEMD1-205ENST00000367154 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
LEMD1-205ENST00000367154 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
LEMD1-205ENST00000367154 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
LEMD1-205ENST00000367154 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
LEMD1-205ENST00000367154 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
LEMD1-205ENST00000367154 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
LEMD1-205ENST00000367154 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
LEMD1-205ENST00000367154 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
LEMD1-205ENST00000367154 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
LEMD1-205ENST00000367154 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
LEMD1-205ENST00000367154 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
LEMD1-205ENST00000367154 WIZO95785 1651 aa25.6■■□□□ 1.69
LEMD1-205ENST00000367154 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
LEMD1-205ENST00000367154 NESP48681 1621 aa25.19■■□□□ 1.62
LEMD1-205ENST00000367154 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
LEMD1-205ENST00000367154 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
LEMD1-205ENST00000367154 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
LEMD1-205ENST00000367154 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
LEMD1-205ENST00000367154 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
LEMD1-205ENST00000367154 PDS5BQ9NTI5 1447 aa25.04■■□□□ 1.6
LEMD1-205ENST00000367154 CFTRP13569 1480 aa24.97■■□□□ 1.59
LEMD1-205ENST00000367154 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
LEMD1-205ENST00000367154 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
LEMD1-205ENST00000367154 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
LEMD1-205ENST00000367154 CUX2O14529 1486 aa24.8■■□□□ 1.56
LEMD1-205ENST00000367154 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
LEMD1-205ENST00000367154 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
LEMD1-205ENST00000367154 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
LEMD1-205ENST00000367154 WDR62O43379 1518 aa24.63■■□□□ 1.53
LEMD1-205ENST00000367154 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
LEMD1-205ENST00000367154 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
LEMD1-205ENST00000367154 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
LEMD1-205ENST00000367154 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
LEMD1-205ENST00000367154 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
LEMD1-205ENST00000367154 CUX1P39880 1505 aa24.27■■□□□ 1.48
LEMD1-205ENST00000367154 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
LEMD1-205ENST00000367154 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.47
LEMD1-205ENST00000367154 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
LEMD1-205ENST00000367154 SOGA1O94964 1423 aa24.18■■□□□ 1.46
LEMD1-205ENST00000367154 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
LEMD1-205ENST00000367154 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
LEMD1-205ENST00000367154 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
LEMD1-205ENST00000367154 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
LEMD1-205ENST00000367154 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
LEMD1-205ENST00000367154 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
LEMD1-205ENST00000367154 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
LEMD1-205ENST00000367154 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.44
LEMD1-205ENST00000367154 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
LEMD1-205ENST00000367154 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
LEMD1-205ENST00000367154 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
LEMD1-205ENST00000367154 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
LEMD1-205ENST00000367154 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
LEMD1-205ENST00000367154 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
LEMD1-205ENST00000367154 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
LEMD1-205ENST00000367154 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.41
LEMD1-205ENST00000367154 SNAPC4Q5SXM2 1469 aa23.82■■□□□ 1.4
LEMD1-205ENST00000367154 FBLN2P98095 1184 aa23.82■■□□□ 1.4
LEMD1-205ENST00000367154 MAGI1Q96QZ7 1491 aaPredicted RBP23.8■■□□□ 1.4
LEMD1-205ENST00000367154 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
LEMD1-205ENST00000367154 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
LEMD1-205ENST00000367154 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
LEMD1-205ENST00000367154 KIF27Q86VH2 1401 aa23.71■■□□□ 1.39
LEMD1-205ENST00000367154 CHD1O14646 1710 aa23.7■■□□□ 1.39
LEMD1-205ENST00000367154 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
LEMD1-205ENST00000367154 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
LEMD1-205ENST00000367154 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
LEMD1-205ENST00000367154 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
LEMD1-205ENST00000367154 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
LEMD1-205ENST00000367154 IGF1RP08069 1367 aa23.55■■□□□ 1.36
LEMD1-205ENST00000367154 CUL7Q14999 1698 aa23.49■■□□□ 1.35
LEMD1-205ENST00000367154 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
LEMD1-205ENST00000367154 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
LEMD1-205ENST00000367154 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
LEMD1-205ENST00000367154 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
LEMD1-205ENST00000367154 NUP160Q12769 1436 aa23.42■■□□□ 1.34
LEMD1-205ENST00000367154 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
LEMD1-205ENST00000367154 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
LEMD1-205ENST00000367154 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
LEMD1-205ENST00000367154 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
LEMD1-205ENST00000367154 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
LEMD1-205ENST00000367154 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
LEMD1-205ENST00000367154 EEA1Q15075 1411 aa23.32■■□□□ 1.32
LEMD1-205ENST00000367154 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms