RNA–Protein interactions for RNA: ENST00000262134.9

LPCAT2-201, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT2, Length 5,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-201ENST00000262134 DCAF8L2P0C7V8 631 aa21.68■■□□□ 1.06
LPCAT2-201ENST00000262134 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
LPCAT2-201ENST00000262134 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
LPCAT2-201ENST00000262134 PELP1Q8IZL8 1130 aaKnown RBP21.07■□□□□ 0.96
LPCAT2-201ENST00000262134 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
LPCAT2-201ENST00000262134 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
LPCAT2-201ENST00000262134 PCGF6Q9BYE7 350 aa20.53■□□□□ 0.88
LPCAT2-201ENST00000262134 APLP2Q06481 763 aa20.15■□□□□ 0.82
LPCAT2-201ENST00000262134 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
LPCAT2-201ENST00000262134 FAM9AQ8IZU1 332 aaPredicted RBP20.09■□□□□ 0.81
LPCAT2-201ENST00000262134 CCER1Q8TC90 406 aaPredicted RBP20.09■□□□□ 0.81
LPCAT2-201ENST00000262134 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
LPCAT2-201ENST00000262134 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
LPCAT2-201ENST00000262134 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
LPCAT2-201ENST00000262134 MYT1Q01538 1121 aa19.96■□□□□ 0.79
LPCAT2-201ENST00000262134 HRCP23327 699 aa19.81■□□□□ 0.76
LPCAT2-201ENST00000262134 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
LPCAT2-201ENST00000262134 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
LPCAT2-201ENST00000262134 NEFLP07196 543 aa19.58■□□□□ 0.72
LPCAT2-201ENST00000262134 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
LPCAT2-201ENST00000262134 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
LPCAT2-201ENST00000262134 RANGAP1P46060 587 aaPredicted RBP19.43■□□□□ 0.7
LPCAT2-201ENST00000262134 LOC105371045A0A1W2PR82 267 aa19.35■□□□□ 0.69
LPCAT2-201ENST00000262134 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
LPCAT2-201ENST00000262134 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
LPCAT2-201ENST00000262134 DAXXQ9UER7 740 aaPredicted RBP19.16■□□□□ 0.66
LPCAT2-201ENST00000262134 ATP1B4Q9UN42 357 aaPredicted RBP19.14■□□□□ 0.65
LPCAT2-201ENST00000262134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
LPCAT2-201ENST00000262134 DIEXFQ68CQ4 756 aaKnown RBP18.98■□□□□ 0.63
LPCAT2-201ENST00000262134 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
LPCAT2-201ENST00000262134 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
LPCAT2-201ENST00000262134 ITGAEP38570 1179 aa18.78■□□□□ 0.6
LPCAT2-201ENST00000262134 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
LPCAT2-201ENST00000262134 ZNF316A6NFI3 1004 aaPredicted RBP18.65■□□□□ 0.58
LPCAT2-201ENST00000262134 POLR3GLQ9BT43 218 aa18.64■□□□□ 0.58
LPCAT2-201ENST00000262134 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
LPCAT2-201ENST00000262134 BCANQ96GW7 911 aa18.55■□□□□ 0.56
LPCAT2-201ENST00000262134 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
LPCAT2-201ENST00000262134 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
LPCAT2-201ENST00000262134 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
LPCAT2-201ENST00000262134 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
LPCAT2-201ENST00000262134 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
LPCAT2-201ENST00000262134 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
LPCAT2-201ENST00000262134 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
LPCAT2-201ENST00000262134 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
LPCAT2-201ENST00000262134 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
LPCAT2-201ENST00000262134 ANP32CO43423 234 aa18.19■□□□□ 0.5
LPCAT2-201ENST00000262134 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
LPCAT2-201ENST00000262134 FKBP8Q14318 412 aa18.04■□□□□ 0.48
LPCAT2-201ENST00000262134 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
LPCAT2-201ENST00000262134 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
LPCAT2-201ENST00000262134 ANP32AP39687 249 aaKnown RBP17.98■□□□□ 0.47
LPCAT2-201ENST00000262134 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
LPCAT2-201ENST00000262134 MIER1Q8N108 512 aa17.93■□□□□ 0.46
LPCAT2-201ENST00000262134 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
LPCAT2-201ENST00000262134 ABCC9O60706 1549 aa17.92■□□□□ 0.46
LPCAT2-201ENST00000262134 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
LPCAT2-201ENST00000262134 ANP32BQ92688 251 aaKnown RBP17.88■□□□□ 0.45
LPCAT2-201ENST00000262134 EIF5BO60841 1220 aaKnown RBP17.87■□□□□ 0.45
LPCAT2-201ENST00000262134 GLIPR1L2Q4G1C9 344 aa17.87■□□□□ 0.45
LPCAT2-201ENST00000262134 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.45
LPCAT2-201ENST00000262134 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
LPCAT2-201ENST00000262134 NEFMP07197 916 aa17.81■□□□□ 0.44
LPCAT2-201ENST00000262134 HNRNPUQ00839 825 aaKnown RBP eCLIP17.79■□□□□ 0.44
LPCAT2-201ENST00000262134 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
LPCAT2-201ENST00000262134 BCL11AQ9H165 835 aa17.73■□□□□ 0.43
LPCAT2-201ENST00000262134 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
LPCAT2-201ENST00000262134 NBR1Q14596 966 aa17.71■□□□□ 0.43
LPCAT2-201ENST00000262134 SLC24A1O60721 1099 aa17.7■□□□□ 0.42
LPCAT2-201ENST00000262134 ZCCHC6Q5VYS8 1495 aaKnown RBP17.68■□□□□ 0.42
LPCAT2-201ENST00000262134 HSP90AA1P07900 732 aaKnown RBP17.67■□□□□ 0.42
LPCAT2-201ENST00000262134 FAM9BQ8IZU0 186 aa17.67■□□□□ 0.42
LPCAT2-201ENST00000262134 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
LPCAT2-201ENST00000262134 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
LPCAT2-201ENST00000262134 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
LPCAT2-201ENST00000262134 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
LPCAT2-201ENST00000262134 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
LPCAT2-201ENST00000262134 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
LPCAT2-201ENST00000262134 CCDC136Q96JN2 1154 aa17.56■□□□□ 0.4
LPCAT2-201ENST00000262134 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
LPCAT2-201ENST00000262134 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
LPCAT2-201ENST00000262134 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
LPCAT2-201ENST00000262134 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
LPCAT2-201ENST00000262134 SUPT16HQ9Y5B9 1047 aaKnown RBP17.46■□□□□ 0.39
LPCAT2-201ENST00000262134 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
LPCAT2-201ENST00000262134 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
LPCAT2-201ENST00000262134 CLIP1P30622 1438 aa17.4■□□□□ 0.38
LPCAT2-201ENST00000262134 TMC1Q8TDI8 760 aa17.39■□□□□ 0.38
LPCAT2-201ENST00000262134 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
LPCAT2-201ENST00000262134 ARXQ96QS3 562 aa17.36■□□□□ 0.37
LPCAT2-201ENST00000262134 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
LPCAT2-201ENST00000262134 FBLN2P98095 1184 aa17.28■□□□□ 0.36
LPCAT2-201ENST00000262134 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
LPCAT2-201ENST00000262134 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
LPCAT2-201ENST00000262134 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
LPCAT2-201ENST00000262134 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
LPCAT2-201ENST00000262134 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
LPCAT2-201ENST00000262134 TRIM44Q96DX7 344 aaPredicted RBP17.25■□□□□ 0.35
LPCAT2-201ENST00000262134 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
LPCAT2-201ENST00000262134 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms